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arxiv: q-bio/0606026 · v9 · submitted 2006-06-20 · 🧬 q-bio.BM · q-bio.QM

Parametrization of the Hybrid Potential for Pairs of Neutral Atoms

classification 🧬 q-bio.BM q-bio.QM
keywords potentialhybridatomsneutralaccurateall-atombiomoleculescoefficient
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The hybrid form is a combination of the Rydberg potential and the London inverse-sixth-power energy. It is accurate at all relevant distance scales and simple enough for use in all-atom simulations of biomolecules. One may compute the parameters of the hybrid potential for the ground state of a pair of neutral atoms from their internuclear separation, the depth and curvature of their potential at its minimum, and from their van der Waals coefficient of dispersion.

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