Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities | Paper Citation Record

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Unresolved cited work

Reference 1

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Unresolved cited work

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This paper cites Multireference alignment is easier with an aperiodic translation distribution,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Multireference alignment is easier with an aperiodic translation distribution,

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This paper cites Estimation in the group action channel,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Estimation in the group action channel,

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This paper cites Building Rome in a day,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Building Rome in a day,

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This paper cites Fundamental limits in multi-image alignment,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Fundamental limits in multi-image alignment,

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This paper cites Deep learning for validating and estimating resolution of cryo-electron microscopy density maps,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Deep learning for validating and estimating resolution of cryo-electron microscopy density maps,

Reference 7

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This paper cites How cryo-EM is revolutionizing structural biology,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities How cryo-EM is revolutionizing structural biology,

Reference 8

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This paper cites Statistical guarantees for the EM algorithm: From population to sample-based analysis,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Statistical guarantees for the EM algorithm: From population to sample-based analysis,

Reference 9

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This paper cites Non-uniformity of projection distributions attenuates resolution in cryo-EM,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Non-uniformity of projection distributions attenuates resolution in cryo-EM,

Reference 10

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Estimation under group actions: recovering orbits from invariants

Reference 11

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This paper cites Non-unique games over compact groups and orientation estimation in cryo-EM.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Non-unique games over compact groups and orientation estimation in cryo-EM

Reference 12

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This paper cites Notes on computational-to-statistical gaps: predictions using statistical physics,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Notes on computational-to-statistical gaps: predictions using statistical physics,

Reference 13

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This paper cites 2.3 ˚A resolution cryo-EM structure of human p97 and mechanism of allosteric inhibition,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities 2.3 ˚A resolution cryo-EM structure of human p97 and mechanism of allosteric inhibition,

Reference 14

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This paper cites Rapid solution of the cryo-EM reconstruction problem by frequency marching,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Rapid solution of the cryo-EM reconstruction problem by frequency marching,

Reference 15

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This paper cites A parallel nonuniform fast Fourier transform library based on an exponential of semicircle.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities A parallel nonuniform fast Fourier transform library based on an exponential of semicircle

Reference 16

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This paper cites Atomic resolution cryo-EM structure of β-galactosidase,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Atomic resolution cryo-EM structure of β-galactosidase,

Reference 17

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This paper cites 2.2 ˚A resolution cryo-EM structure of β-galactosidase in complex with a cell-permeant inhibitor,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities 2.2 ˚A resolution cryo-EM structure of β-galactosidase in complex with a cell-permeant inhibitor,

Reference 18

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This paper cites Uniqueness of tomography with unknown view angles,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Uniqueness of tomography with unknown view angles,

Reference 19

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This paper cites Toward single particle reconstruction without particle picking: Breaking the detection limit.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Toward single particle reconstruction without particle picking: Breaking the detection limit

Reference 20

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Observation d4c5f11a-20b6-40c8-8c0e-1d720a5b8fe1 · outbound

This paper cites Multi-target detection with application to cryo-electron microscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Multi-target detection with application to cryo-electron microscopy,

Reference 21

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This paper cites Bispectrum inversion with application to multireference alignment,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Bispectrum inversion with application to multireference alignment,

Reference 22

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This paper cites Denoising and covariance estimation of single particle cryo-EM images,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Denoising and covariance estimation of single particle cryo-EM images,

Reference 23

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Optimization methods for large-scale machine learning,

Reference 24

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This paper cites Heterogeneous multireference alignment: A single pass approach,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Heterogeneous multireference alignment: A single pass approach,

Reference 25

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This paper cites Convolutional neural networks for automated annotation of cellular cryo-electron tomograms,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Convolutional neural networks for automated annotation of cellular cryo-electron tomograms,

Reference 26

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This paper cites High- resolution noise substitution to measure overﬁtting and validate resolution in 3D structure determination by single particle electron cryomicroscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities High- resolution noise substitution to measure overﬁtting and validate resolution in 3D structure determination by single particle electron cryomicroscopy,

Reference 27

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This paper cites Maximum likelihood from incomplete data via the EM algorithm,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Maximum likelihood from incomplete data via the EM algorithm,

Reference 28

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Optimal shrinkage of eigenvalues in the spiked covariance model,

Reference 29

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This paper cites Electron microscopy of frozen water and aqueous solutions,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Electron microscopy of frozen water and aqueous solutions,

Reference 30

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Fast fourier transforms for nonequispaced data,

Reference 31

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Inverse problems of trapped objects,

Reference 32

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities On the correction of the contrast transfer function in biological electron microscopy,

Reference 33

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This paper cites Advances in the ﬁeld of single-particle cryo-electron microscopy over the last decade,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Advances in the ﬁeld of single-particle cryo-electron microscopy over the last decade,

Reference 34

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This paper cites Continuous changes in structure mapped by manifold embedding of single-particle data in cryo-EM,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Continuous changes in structure mapped by manifold embedding of single-particle data in cryo-EM,

Reference 35

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This paper cites Measuring the optimal exposure for single particle cryo-EM using a 2.6 ˚A reconstruction of rotavirus VP6,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Measuring the optimal exposure for single particle cryo-EM using a 2.6 ˚A reconstruction of rotavirus VP6,

Reference 36

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This paper cites cisTEM, user-friendly software for single-particle image processing,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities cisTEM, user-friendly software for single-particle image processing,

Reference 37

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This paper cites Common lines modeling for reference free ab-initio reconstruction in cryo- EM,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Common lines modeling for reference free ab-initio reconstruction in cryo- EM,

Reference 38

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Accelerating the nonuniform fast Fourier transform,

Reference 39

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This paper cites Cryo-EM structures reveal mechanism and inhibition of DNA targeting by a CRISPR-Cas surveillance complex,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Cryo-EM structures reveal mechanism and inhibition of DNA targeting by a CRISPR-Cas surveillance complex,

Reference 40

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This paper cites APPLE picker: Automatic particle picking, a low-effort cryo-EM framework,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities APPLE picker: Automatic particle picking, a low-effort cryo-EM framework,

Reference 41

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This paper cites The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules,

Reference 42

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Observation 98d59e9e-277b-4009-b681-6fc58dad574c · outbound

This paper cites Avoiding the pitfalls of single particle cryo-electron microscopy: Einstein from noise,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Avoiding the pitfalls of single particle cryo-electron microscopy: Einstein from noise,

Reference 43

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Observation 16ecead3-0302-4919-9082-aa0bf4e5a023 · outbound

This paper cites Tilt-pair analysis of images from a range of different specimens in single-particle electron cryomicroscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Tilt-pair analysis of images from a range of different specimens in single-particle electron cryomicroscopy,

Reference 44

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Observation 94c64377-5cbe-4262-b841-ed8f5dfe9241 · outbound

This paper cites Robust w-estimators for cryo-EM class means,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Robust w-estimators for cryo-EM class means,

Reference 45

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Observation fc759c81-27aa-4396-b226-735959bd5432 · outbound

This paper cites Jolliffe, Principal component analysis.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Jolliffe, Principal component analysis

Reference 46

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This paper cites The reconstruction of structure from electron micrographs of randomly oriented particles,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities The reconstruction of structure from electron micrographs of randomly oriented particles,

Reference 47

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.508669Z

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Observation 6e1cfb70-3464-48be-8ca1-79f2c25b0894 · outbound

This paper cites Cryo-EM structure of human rhodopsin bound to an inhibitory G protein,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Cryo-EM structure of human rhodopsin bound to an inhibitory G protein,

Reference 48

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.497912Z

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Observation 3fef4867-444a-4de1-a33b-9c9a6a6e84e7 · outbound

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Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities The resolution revolution,

Reference 49

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.486571Z

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Observation 57d43539-3d81-478f-8692-3721cb93de02 · outbound

This paper cites The steerable graph Laplacian and its application to ﬁltering image datasets,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities The steerable graph Laplacian and its application to ﬁltering image datasets,

Reference 50

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.475222Z

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Observation 46f073e7-299a-438b-b33e-77cd5e5fb866 · outbound

This paper cites Statistical tomography of microscopic life,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Statistical tomography of microscopic life,

Reference 51

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Observation 3096903f-9675-4a7b-ae79-b1d61cfab6f0 · outbound

This paper cites Structure of the TRPV1 ion channel determined by electron cryo- microscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Structure of the TRPV1 ion channel determined by electron cryo- microscopy,

Reference 52

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.450747Z

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Observation d5cb9f2f-1a2d-45f4-88ee-b82a00f63356 · outbound

This paper cites Three-dimensional single-particle imaging using angular correlations from X-ray laser data,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Three-dimensional single-particle imaging using angular correlations from X-ray laser data,

Reference 53

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.439328Z

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Observation 51ec5d3d-9545-453b-be60-c5ed23e1082f · outbound

This paper cites Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs,

Reference 54

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.427804Z

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Observation 587c9e16-677d-4e03-a305-d3cfd54346af · outbound

This paper cites Breaking cryo-EM resolution barriers to facilitate drug discovery,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Breaking cryo-EM resolution barriers to facilitate drug discovery,

Reference 55

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.416592Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 27cd09af-57df-4339-a478-afdda12c59ad · outbound

This paper cites Cryo-EM reconstruction of continuous heterogeneity by Laplacian spectral volumes.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Cryo-EM reconstruction of continuous heterogeneity by Laplacian spectral volumes

Reference 56

Resolution: verified exact; local_arxiv, observed 2026-08-14T15:51:46.687528Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 02e5db34-59a5-4080-8f28-b4adae211012 · outbound

This paper cites Natterer, The Mathematics of Computerized Tomography.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Natterer, The Mathematics of Computerized Tomography

Reference 57

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.404966Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 71dc2ea0-ccf4-40bf-9be5-c5b566766234 · outbound

This paper cites Consistent estimates based on partially consistent observations,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Consistent estimates based on partially consistent observations,

Reference 58

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.393536Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 855fcddf-2f5a-4306-9245-9654c2e4a719 · outbound

This paper cites The development of cryo-EM into a mainstream structural biology technique,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities The development of cryo-EM into a mainstream structural biology technique,

Reference 59

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.380875Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation fe055b05-37a3-4ed7-bd9a-75ee356f5bd8 · outbound

This paper cites Cryo-EM: a unique tool for the visualization of macromolecular complexity,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Cryo-EM: a unique tool for the visualization of macromolecular complexity,

Reference 60

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.367935Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 2ed292a4-e226-46cb-9094-61fc4c2147f1 · outbound

This paper cites Denoising linear models with permuted data,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Denoising linear models with permuted data,

Reference 61

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.355780Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 2e6aa988-8b20-4c98-8dee-d192634d1623 · outbound

This paper cites On lines and planes of closest ﬁt to systems of points in space,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities On lines and planes of closest ﬁt to systems of points in space,

Reference 62

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.344026Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 48c59c52-b974-4ae1-9661-ebbf554133cc · outbound

This paper cites Gridding-based direct Fourier inversion of the three-dimensional ray transform,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Gridding-based direct Fourier inversion of the three-dimensional ray transform,

Reference 63

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.331929Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation a96d299b-9cd8-46ef-9e16-5b4daf9a41b4 · outbound

This paper cites A common lines approach for ab-initio modeling of cyclically-symmetric molecules.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities A common lines approach for ab-initio modeling of cyclically-symmetric molecules

Reference 64

Resolution: verified exact; local_arxiv, observed 2026-08-14T15:51:46.668613Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 71b21b77-9de3-41af-8445-c17dd42dfca7 · outbound

This paper cites cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination,

Reference 65

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.319788Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 176f8fcf-7a74-49c2-8c03-0571977bf76a · outbound

This paper cites A stochastic hill climbing approach for simultaneous 2D alignment and clustering of cryogenic electron microscopy images,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities A stochastic hill climbing approach for simultaneous 2D alignment and clustering of cryogenic electron microscopy images,

Reference 66

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.307917Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 2a7ee81d-bd41-40c6-b46f-3a8cfdd2be5c · outbound

This paper cites Processing of cryo-EM movie data,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Processing of cryo-EM movie data,

Reference 67

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.295724Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation ba8d18b3-8e5c-4393-9a87-351cae4cb7f5 · outbound

This paper cites CTFFIND4: Fast and accurate defocus estimation from electron micrographs,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities CTFFIND4: Fast and accurate defocus estimation from electron micrographs,

Reference 68

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.282999Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 564ea609-bf4c-451b-9e41-27ce760f1374 · outbound

This paper cites SE-sync: A certiﬁably correct algorithm for synchronization over the special Euclidean group,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities SE-sync: A certiﬁably correct algorithm for synchronization over the special Euclidean group,

Reference 69

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.271177Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 239738b9-4146-40c2-b0ed-28692032c137 · outbound

This paper cites Validating maps from single particle electron cryomicroscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Validating maps from single particle electron cryomicroscopy,

Reference 70

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.259350Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation bba3e8cd-9133-4223-949c-18211e3b082a · outbound

This paper cites Robust evaluation of 3D electron cryomicroscopy data using tilt-pairs,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Robust evaluation of 3D electron cryomicroscopy data using tilt-pairs,

Reference 71

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.247839Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 05ff45b8-9999-429f-986e-3fd5378b6636 · outbound

This paper cites Deep consensus, a deep learning-based approach for particle pruning in cryo-electron microscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Deep consensus, a deep learning-based approach for particle pruning in cryo-electron microscopy,

Reference 72

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.235451Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 7038a5d3-2c55-4b99-96e3-13456ec77316 · outbound

This paper cites RELION: implementation of a Bayesian approach to cryo-EM structure determination,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities RELION: implementation of a Bayesian approach to cryo-EM structure determination,

Reference 73

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.222123Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 5eb71eb2-0eba-4b21-8381-c4ee9ab54031 · outbound

This paper cites Semi-automated selection of cryo-EM particles in RELION-1.3,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Semi-automated selection of cryo-EM particles in RELION-1.3,

Reference 74

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.209823Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 687b7aae-71ae-4f12-81eb-cd715ad86564 · outbound

This paper cites Prevention of overﬁtting in cryo-EM structure determination,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Prevention of overﬁtting in cryo-EM structure determination,

Reference 75

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.197250Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 047b3a00-1e63-4e2f-8489-9dfe99142f2e · outbound

This paper cites Maximum- likelihood multi-reference reﬁnement for electron microscopy images,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Maximum- likelihood multi-reference reﬁnement for electron microscopy images,

Reference 76

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.185935Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 8ba66a35-7810-4f11-aeb4-0dc6748aaeda · outbound

This paper cites Method of moments for 3-D single particle ab initio modeling with non-uniform distribution of viewing angles.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Method of moments for 3-D single particle ab initio modeling with non-uniform distribution of viewing angles

Reference 77

Resolution: verified exact; local_arxiv, observed 2026-08-14T15:51:46.647751Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 445aa898-d1d1-4ba7-bb96-ce580f982301 · outbound

This paper cites A method for the alignment of heterogeneous macromolecules from electron microscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities A method for the alignment of heterogeneous macromolecules from electron microscopy,

Reference 78

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.174327Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 05d41a5d-8f35-421d-b1f0-9dd2788611e9 · outbound

This paper cites A maximum-likelihood approach to single-particle image reﬁnement,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities A maximum-likelihood approach to single-particle image reﬁnement,

Reference 79

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.162820Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 0df5bb03-e83d-43ff-be4d-f3721ce662d8 · outbound

This paper cites Classical detection theory and the cryo-EM particle selection problem,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Classical detection theory and the cryo-EM particle selection problem,

Reference 80

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.151328Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 4a40817f-8dc6-4186-bd2c-bfc2b649a78c · outbound

This paper cites An adaptation of the Wiener ﬁlter suitable for analyzing images of isolated single particles,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities An adaptation of the Wiener ﬁlter suitable for analyzing images of isolated single particles,

Reference 81

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.139173Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation d6d2b5c9-0b93-4d7e-92c6-60aff8c3c2d5 · outbound

This paper cites Angular synchronization by eigenvectors and semideﬁnite programming,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Angular synchronization by eigenvectors and semideﬁnite programming,

Reference 82

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.127251Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 03775278-0214-4f5e-abb7-54a469b981fd · outbound

This paper cites Mathematics for cryo-electron microscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Mathematics for cryo-electron microscopy,

Reference 83

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.115390Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 7d3c8ec2-677a-410b-a1b7-2859eaccd3a9 · outbound

This paper cites Three-dimensional structure determination from common lines in cryo-EM by eigenvectors and semideﬁnite programming,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Three-dimensional structure determination from common lines in cryo-EM by eigenvectors and semideﬁnite programming,

Reference 84

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.103041Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation bc5c92d3-d01e-45ec-8805-fbe502c68a6c · outbound

This paper cites A clustering approach to multireference alignment of single-particle projections in electron microscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities A clustering approach to multireference alignment of single-particle projections in electron microscopy,

Reference 85

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.090628Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation d6daa9e3-aea7-479a-87f3-2c716f00af81 · outbound

This paper cites Survey of the analysis of continuous conformational variability of biological macromolecules by electron microscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Survey of the analysis of continuous conformational variability of biological macromolecules by electron microscopy,

Reference 86

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.078676Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 82f8bcb3-e76f-446a-90f5-0fd04627cece · outbound

This paper cites Fast, robust, and accurate determination of transmission electron microscopy contrast transfer function,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Fast, robust, and accurate determination of transmission electron microscopy contrast transfer function,

Reference 87

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.066158Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 61c6d52e-6654-4d6f-bb13-8a21bbf960b9 · outbound

This paper cites A review of resolution measures and related aspects in 3D electron microscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities A review of resolution measures and related aspects in 3D electron microscopy,

Reference 88

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.054250Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 91eabf50-6147-4f9e-aa37-a932edda8e6c · outbound

This paper cites EMAN2: an extensible image processing suite for electron microscopy,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities EMAN2: an extensible image processing suite for electron microscopy,

Reference 89

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.042476Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 9ebdf9f6-2abf-4a2a-8f0c-95587ce7bf1f · outbound

This paper cites The spectral representation and transformation properties of the higher moments of stationary time series,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities The spectral representation and transformation properties of the higher moments of stationary time series,

Reference 90

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.030315Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 1bafd804-9751-4439-b67a-96bec6cc9292 · outbound

This paper cites Determination of the spatial orientation of arbitrarily arranged identical particles of unknown structure from their projections,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Determination of the spatial orientation of arbitrarily arranged identical particles of unknown structure from their projections,

Reference 91

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.018164Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 867fdb7b-196f-4600-99c2-e224cc340378 · outbound

This paper cites Angular reconstitution: a posteriori assignment of projection directions for 3D reconstruction,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Angular reconstitution: a posteriori assignment of projection directions for 3D reconstruction,

Reference 92

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:47.005432Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation c5eb500f-66fd-4320-bc3a-42a1e24bdd7f · outbound

This paper cites Use of multivariates statistics in analysing the images of biological macromolecules,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Use of multivariates statistics in analysing the images of biological macromolecules,

Reference 93

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:46.993401Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 2873cb55-3711-4c0b-9f6a-2c6d4cfb01ca · outbound

This paper cites Single particle electron cryomicroscopy: trends, issues and future perspective,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Single particle electron cryomicroscopy: trends, issues and future perspective,

Reference 94

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:46.980802Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 91fc7ea7-0c67-4d33-99cb-8264ee058322 · outbound

This paper cites Structure determination from single molecule X-ray scattering with three photons per image,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Structure determination from single molecule X-ray scattering with three photons per image,

Reference 95

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:46.968739Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 97f670d8-8176-47d6-ab39-17d55e81472e · outbound

This paper cites A brief look at imaging and contrast transfer,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities A brief look at imaging and contrast transfer,

Reference 96

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:46.955342Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation dad0092e-3ca2-4640-9205-b301156ff144 · outbound

This paper cites SPHIRE-crYOLO is a fast and accurate fully automated particle picker for cryo-EM,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities SPHIRE-crYOLO is a fast and accurate fully automated particle picker for cryo-EM,

Reference 97

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:46.941207Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 87cbe485-f03b-4180-a2ab-1eaed85202e3 · outbound

This paper cites Deeppicker: a deep learning approach for fully automated particle picking in cryo-EM,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Deeppicker: a deep learning approach for fully automated particle picking in cryo-EM,

Reference 98

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:46.927112Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation fa2a4aa1-5ef7-4404-90c1-bb97a4a092a7 · outbound

This paper cites Gctf: Real-time CTF determination and correction,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Gctf: Real-time CTF determination and correction,

Reference 99

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:46.913438Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation a629d280-191f-42c7-880e-75999210477e · outbound

This paper cites Fast steerable principal component analysis,.

Single-particle cryo-electron microscopy: Mathematical theory, computational challenges, and opportunities Fast steerable principal component analysis,

Reference 100

Resolution: verified fuzzy; raw_fallback, observed 2026-08-14T15:51:46.900080Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Coverage vector

Reference resolution

Outbound references

Pith citing papers