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Paper Citation Record · LEDGER

Investigation of the impact of PTMs on the protein backbone conformation

As of 16 August 2026, this Paper Citation Record lists 19 of 19 outbound references and 0 inbound Pith citation observations for arXiv:1908.05122.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
1908.05122 v1

Coverage vector

measured 19 of 19 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-14T13:27:51.805327Z

measured 19 of 19 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-16T06:30:59.297886+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

19 of 19 outbound references displayed

  • verified exact4
  • verified fuzzy9
  • unresolved4
  • parse uncertain0
  • malformed identifier1
  • metadata mismatch1

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 5da3415e-ee54-41f6-ab1f-d395a174c6b8 · outbound

This paper cites Pierrick Craveur1,2,3,4,5,#, Tarun J.

Investigation of the impact of PTMs on the protein backbone conformation Pierrick Craveur1,2,3,4,5,#, Tarun J

Reference 1

Resolution
verified fuzzy
raw_fallback, observed 2026-08-14T13:27:52.310673Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.692107Z digest=sha256:4eb4636c13d66878450150c4033354b75757e28bf440e4092f8d4aeb398b8cf9

Observation 5afc06fc-b65b-4060-9049-ccf83a848594 · outbound

This paper cites an unresolved cited work.

Investigation of the impact of PTMs on the protein backbone conformation Unresolved cited work

Reference 2

Resolution
verified exact
doi, observed 2026-08-14T13:27:51.880265Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.789208Z digest=sha256:4088011a61dd7b654f78bec1720e2e0ee3ed4df73834a131881a1f670174edb9

Observation 943795df-cb15-4705-850a-eda407e3e691 · outbound

This paper cites an unresolved cited work.

Investigation of the impact of PTMs on the protein backbone conformation Unresolved cited work

Reference 3

Resolution
verified exact
doi, observed 2026-08-14T13:27:51.865037Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.794756Z digest=sha256:c48d7d11c964ded0c0c590d52ebfe29900402094f481bcd0f157bd6d4be90fa1

Observation 34a11c73-61eb-4163-b022-898b152ca763 · outbound

This paper cites induced folding.

Investigation of the impact of PTMs on the protein backbone conformation induced folding

Reference 4

Resolution
verified fuzzy
raw_fallback, observed 2026-08-14T13:27:52.246236Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.706986Z digest=sha256:a694cd0e96d9352d7b90959f109b61c20239c407f8d97f26e23cd420278b95b5

Observation 4927cf2c-7b99-4338-a304-2cad37749137 · outbound

This paper cites The selectivity of interacting partners and order-disorder transition of the protein structures is regulated by PTMs, and most of the times by phosphorylations.

Investigation of the impact of PTMs on the protein backbone conformation The selectivity of interacting partners and order-disorder transition of the protein structures is regulated by PTMs, and most of the times by phosphorylations

Reference 12

Resolution
verified fuzzy
raw_fallback, observed 2026-08-14T13:27:52.089804Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.764446Z digest=sha256:5dcbcdc2a4e793ae71531bfef7c12e75456c03dc01beb8181efde4c8899bdfef

Observation 3bfa662d-7fa6-44b1-b75c-16322c4d8de2 · outbound

This paper cites The example of actin methylation shows an opposite effect of the modification compared to the example of CDK2.

Investigation of the impact of PTMs on the protein backbone conformation The example of actin methylation shows an opposite effect of the modification compared to the example of CDK2

Reference 13

Resolution
verified fuzzy
raw_fallback, observed 2026-08-14T13:27:52.069188Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.770572Z digest=sha256:9edbbb4b9e702131d2faf38fee93370ebf3da54352d30eb068023c0861c398d2

Observation 46a18ee9-9172-4da7-91b3-a58f9816538e · outbound

This paper cites Trapping of ultracold polar molecules with a Thin Wire Electrostatic Trap.

Investigation of the impact of PTMs on the protein backbone conformation Trapping of ultracold polar molecules with a Thin Wire Electrostatic Trap

Reference 15

Resolution
metadata mismatch
local_arxiv, observed 2026-08-14T13:27:52.026255Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.783211Z digest=sha256:caec09d5be4bc0ebda8ae2e2c7973b685b811234c89670b1b0774fedbad39576

Observation ce5b476e-0def-4b09-86a1-cf7e0ab9f71f · outbound

This paper cites dual personality.

Investigation of the impact of PTMs on the protein backbone conformation dual personality

Reference 18

Resolution
verified exact
doi, observed 2026-08-14T13:27:51.849420Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.800012Z digest=sha256:78e45e28d72360298343c12666b50542ee6ce37736d405f38f7b03502d13dbbf

Observation 58bb71db-27a9-4741-9167-0a30b834db95 · outbound

This paper cites Figure S5.

Investigation of the impact of PTMs on the protein backbone conformation Figure S5

Reference 79

Resolution
verified exact
raw_fallback, observed 2026-08-14T13:27:51.998841Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.805327Z digest=sha256:c97e78e8bad53a18bab77e19eb2adebdf2a8fc4f4dd7d41b1da843901f066c84

Observation af2b2160-adfe-4455-af90-adf44919d1c5 · outbound

This paper cites an unresolved cited work.

Investigation of the impact of PTMs on the protein backbone conformation Unresolved cited work

Reference 92

Resolution
unresolved
raw_fallback, observed 2026-08-14T13:27:52.132013Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.744939Z digest=sha256:da97c71f1c8e38e474fd49becb2ca682adbfdd9de8fa8f7467d06aa63d43f719

Observation 980da7f9-ae9f-4532-90e8-6d0b7e5a129b · outbound

This paper cites In the absence of the phosphorylation (see Supplementary Figure S10), this area corresponds to a wide flexible loop, sometimes not even ordered in few structures (see red line).

Investigation of the impact of PTMs on the protein backbone conformation In the absence of the phosphorylation (see Supplementary Figure S10), this area corresponds to a wide flexible loop, sometimes not even ordered in few structures (see red line)

Reference 160

Resolution
verified fuzzy
raw_fallback, observed 2026-08-14T13:27:52.109671Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.752838Z digest=sha256:b3f6ac07610dee275ba4a9bf032b80bb7b89f6480554077fc078b3c723fcb2c0

Observation c9f88e71-1246-4396-b780-c12475f96057 · outbound

This paper cites Briefly described, PBs m and d are prototypes for the central region of α-helix and β-strand, respectively.

Investigation of the impact of PTMs on the protein backbone conformation Briefly described, PBs m and d are prototypes for the central region of α-helix and β-strand, respectively

Reference 1989

Resolution
verified fuzzy
raw_fallback, observed 2026-08-14T13:27:52.198780Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.720968Z digest=sha256:336c368e74bc3e6a2960e2664ad14c0501a45e4d4e240d3d3b6e6f4faa358575

Observation 688410ed-9d70-448e-b1a6-f653a513e9e7 · outbound

This paper cites an unresolved cited work.

Investigation of the impact of PTMs on the protein backbone conformation Unresolved cited work

Reference 2008

Resolution
unresolved
raw_fallback, observed 2026-08-14T13:27:52.161928Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.734656Z digest=sha256:3edd5a1aaff0372362b2b3d1623f7e4b38d6922e327eb03b60b800e2892b1060

Observation fa99a0d1-4023-4989-9abc-373c330c7b43 · outbound

This paper cites Flexibility & PTMs 10 B-factor normalization.

Investigation of the impact of PTMs on the protein backbone conformation Flexibility & PTMs 10 B-factor normalization

Reference 2009

Resolution
malformed identifier
raw_fallback, observed 2026-08-14T13:27:52.147708Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.738717Z digest=sha256:7d11944eb6e1fe233d96468113753d78e25e420ce5606f354f7ac8d9f86026be

Observation 02a3eccf-2508-4dfd-8b14-0c5deefcebff · outbound

This paper cites 2009; Zimmermann and Hansmann.

Investigation of the impact of PTMs on the protein backbone conformation 2009; Zimmermann and Hansmann

Reference 2010

Resolution
verified fuzzy
raw_fallback, observed 2026-08-14T13:27:52.181125Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.728758Z digest=sha256:e6c456e34be9e5b247e9558a5d4b8cc929663ccefad75879963857fec4b6947b

Observation 7861acd7-6396-4b3d-97e1-4035f65cd492 · outbound

This paper cites 2011), or the co-evolution of different PTMs sites within the same protein (Minguez and Bork 2017; Minguez et al.

Investigation of the impact of PTMs on the protein backbone conformation 2011), or the co-evolution of different PTMs sites within the same protein (Minguez and Bork 2017; Minguez et al

Reference 2012

Resolution
verified fuzzy
raw_fallback, observed 2026-08-14T13:27:52.264723Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.702199Z digest=sha256:cca0fafc9418fe05a92ded0da4ff16d8a1be3f68389a2f9bdf4b135b8b899979

Observation 75c3a126-ee7a-4fba-80be-7825d6a7c3b0 · outbound

This paper cites 2016; Imberty and Perez 1995), tagging proteins for degradation by ubiquitination (Zhou and Zeng 2016), and regulation of kinase activity with phosphorylation (Krupa et al.

Investigation of the impact of PTMs on the protein backbone conformation 2016; Imberty and Perez 1995), tagging proteins for degradation by ubiquitination (Zhou and Zeng 2016), and regulation of kinase activity with phosphorylation (Krupa et al

Reference 2015

Resolution
verified fuzzy
raw_fallback, observed 2026-08-14T13:27:52.292077Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.697430Z digest=sha256:6c316e87729552b7c5353f4bf7cbf2244de5c49d10f29aa0acc126c49248498a

Observation 770be0e3-8639-4480-a304-9b5429621c5a · outbound

This paper cites an unresolved cited work.

Investigation of the impact of PTMs on the protein backbone conformation Unresolved cited work

Reference 2016

Resolution
unresolved
raw_fallback, observed 2026-08-14T13:27:52.226845Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.714034Z digest=sha256:20b814c059b2c89ace430dbbef3eb3cfe9ee8408c2c47ac27cb449aea97257b1

Observation fd0eac02-230d-4dfe-9d01-c0fbc42eb8af · outbound

This paper cites an unresolved cited work.

Investigation of the impact of PTMs on the protein backbone conformation Unresolved cited work

Reference 2017

Resolution
unresolved
raw_fallback, observed 2026-08-14T13:27:52.048179Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

source=pdf_text observed=2026-08-14T13:27:51.776030Z digest=sha256:cf30b7e0ac1b1884031e8f1b629ee8b323497302d143bc2a4c0fde9c3244a558

Pith citing papers

No inbound Pith citation observations are available.