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Compression and In-Situ Query Processing for Fine-Grained Array Lineage

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arxiv 2405.17701 v1 pith:OW3UOVVU submitted 2024-05-27 cs.DB

classification cs.DB
keywords lineagedatacompressionprovrcqueryarraybaselinesfine-grained
verification ladder T0 review T1 audit T2 compute T3 formal
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Tracking data lineage is important for data integrity, reproducibility, and debugging data science workflows. However, fine-grained lineage (i.e., at a cell level) is challenging to store, even for the smallest datasets. This paper introduces DSLog, a storage system that efficiently stores, indexes, and queries array data lineage, agnostic to capture methodology. A main contribution is our new compression algorithm, named ProvRC, that compresses captured lineage relationships. Using ProvRC for lineage compression result in a significant storage reduction over functions with simple spatial regularity, beating alternative columnar-store baselines by up to 2000x}. We also show that ProvRC facilitates in-situ query processing that allows forward and backward lineage queries without decompression - in the optimal case, surpassing baselines by 20x in query latency on random numpy pipelines.

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Cited by 1 Pith paper

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  1. Fast Capture of Cell-Level Provenance in Numpy

    cs.DB 2025-06 conditional novelty 4.0 of 10

    A C-backed numpy data type with preallocated provenance buffers captures cell-level lineage up to 275x faster than a naive Python implementation on element-wise operations and scales to 100 million cells.

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