Typed states for the displayed outbound observations.
Source: paper_references, paper_reference_links, observed 2026-08-12T06:03:52.609965Z
Paper Citation Record · LEDGER
As of 16 August 2026, this Paper Citation Record lists 49 of 49 outbound references and 2 inbound Pith citation observations for arXiv:2412.03595.
A citation records a reference. It does not transfer a finding from one paper to another.
Typed states for the displayed outbound observations.
Source: paper_references, paper_reference_links, observed 2026-08-12T06:03:52.609965Z
One-hop event checks from named stored sources.
Source: scholarly_work_events, retraction_status_cache, observed 2026-08-16T06:30:59.297886+00:00
Pith citing papers itemized under the disclosed page cap.
Source: paper_references, paper_reference_links, observed 2026-08-16T00:42:16.741414Z
A source-named dated measurement, never combined with another source.
Source: pith, observed 2026-08-16T00:42:17.011916Z
49 of 49 outbound references displayed
External citation measurements
No source-named external measurement is stored.
Observation 15595513-cc1e-4ae9-b21b-55cb53cc29fc · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem A.; Parrinello, M
Reference 1
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 351ca2f6-f59d-45ae-9edd-ea0622220bd6 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem A.; Bonomi, M.; Branduardi, D.; Camilloni, C.; Bussi, G
Reference 2
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 41a70cef-423a-489d-9c9c-73a4c494d7c2 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem COVID-19 and the academy: It is time for going digital
Reference 3
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation db7a7676-c8ca-4f45-9f7a-ef22ceb8209b · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Unresolved cited work
Reference 4
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation d737dbf0-5fef-4cbb-8dd0-c2664ac14e53 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem In Molecular Modeling of Proteins; Kukol, A., Ed.; Springer New York: New York, NY, 2015; pp 151--171
Reference 5
Source-reported events for the cited work
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Observation cd9b7e80-8ab3-48e7-a4ef-9dfc630706f8 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem In Biomolecular Simulations: Methods and Protocols; Bonomi, M., Camilloni, C., Eds.; Springer New York: New York, NY, 2019; pp 313--340
Reference 6
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation c84ef4cc-0024-4707-85d3-674a8a27c87d · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Unresolved cited work
Reference 7
Source-reported events for the cited work
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Observation 277041b0-5d68-4d7f-8663-d3231d80bf7f · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem A.; Gasparotto, P
Reference 8
Source-reported events for the cited work
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Observation 26a4c450-7e2b-4944-9ae3-7d1065f831c1 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem A.; Gasparotto, P
Reference 9
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation e8b4ec77-aa0c-4e93-8daa-5238ed18fa6e · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem A.; Giberti, F.; Sosso, G
Reference 10
Source-reported events for the cited work
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Observation e7fc1088-42f1-4857-bbd7-b30586bb2477 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Unresolved cited work
Reference 11
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation e5bb3ad7-c490-4f30-af7f-ec7fe743a973 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Nonphysical sampling distributions in Monte Carlo free-energy estimation: Umbrella sampling
Reference 12
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation da0cc756-4cdd-4d88-afd2-183dcaf7ad57 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Escaping free-energy minima
Reference 13
Source-reported events for the cited work
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Observation 3d759ba4-58a8-4d0d-a94a-48135d0b67b4 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Replica-exchange molecular dynamics method for protein folding
Reference 14
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation a875991c-8f14-4c70-ae00-fb37f818c479 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Analysis of the Results of Metadynamics Simulations by metadynminer and metadynminer3d
Reference 15
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation c194b737-fc23-4b12-99a6-8c7106b577a3 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem A unified framework for machine learning collective variables for enhanced sampling simulations: mlcolvar
Reference 16
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 1260fe96-1e30-4767-b9a0-904aef83e5f5 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Advanced simulations with PLUMED: OPES and Machine Learning Collective Variables
Reference 17
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation b2377515-6c34-46cd-b6ce-e60eac3ad915 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Accurate and Efficient SAXS/SANS Implementation Including Solvation Layer Effects Suitable for Molecular Simulations
Reference 18
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation b1693999-7642-4437-b737-8b07ea7e3cdf · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem L.; Parrinello, M
Reference 19
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 5e6bddc1-76c8-455b-a2b4-f49665a59afe · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Ligand binding free-energy calculations with funnel metadynamics
Reference 20
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 54e97e7f-663f-4210-a968-1b058a7d632c · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Exploration vs Convergence Speed in Adaptive-Bias Enhanced Sampling
Reference 21
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation d2510c59-ce28-466e-8609-67cac29c16e5 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem D.; Voth, G
Reference 22
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 6653ca65-8f5d-401d-a8ac-15d2be36110e · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Accelerating All-Atom Simulations and Gaining Mechanistic Understanding of Biophysical Systems through State Predictive Information Bottleneck
Reference 23
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation a45970b0-1cc9-42c0-9b1d-51200ae0ced3 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Molecular dynamics simulations of solutions at constant chemical potential
Reference 24
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 2bc71ef7-8488-4334-bcfc-844c8a077ad0 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Path Finding on High-Dimensional Free Energy Landscapes
Reference 25
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 648a9edd-c842-49fb-86ec-d1377646baf4 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Hamiltonian replica exchange in GROMACS: a flexible implementation
Reference 26
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation edbf6073-3e45-440a-965d-cde206fbd249 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Improving the Efficiency of Variationally Enhanced Sampling with Wavelet-Based Bias Potentials
Reference 27
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 1181888f-b425-4f54-b942-21c14b9e2935 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem M.; Parrinello, M
Reference 28
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 1fcc0818-b463-44ec-abd4-9bca1c4e0952 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem A Transfer Free Energy Based Implicit Solvent Model for Protein Simulations in Solvent Mixtures: Urea-Induced Denaturation as a Case Study
Reference 29
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 0d70dc51-6edb-426c-b94e-9f2b3d034dec · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem J.; Singh, Y.; Vanden-Eijnden, E.; Hocky, G
Reference 30
Source-reported events for the cited work
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Observation eb2bd7fb-4db9-415e-bdc3-320b0feb6b41 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem E.; Thomasen, F
Reference 31
Source-reported events for the cited work
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Observation 313a7096-e459-4821-b510-4878f70da6c1 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Multi-replica biased sampling for photoswitchable -conjugated polymers
Reference 32
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 4bfef365-a492-4fc3-a0f7-c368b4582778 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Exhaustive Search of Ligand Binding Pathways via Volume-Based Metadynamics
Reference 33
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 1c2ea486-2516-49fd-870b-f3f95151fca6 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Unresolved cited work
Reference 34
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 76595791-909f-4537-91fc-6223ce75d57e · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Unresolved cited work
Reference 35
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 9d390169-48f7-4e0e-a7ff-e2d106a474a6 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem F.; Rotskoff, G.; Parrinello, M.; Voth, G
Reference 36
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation a9cc22f3-e003-4ee4-adc0-aa913be707d7 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Finding multiple reaction pathways of ligand unbinding
Reference 37
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation c8d149b5-e4cb-4117-81db-f0e215cb2d81 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Recent Advances and Emerging Challenges in the Molecular Modeling of Mechanobiological Processes
Reference 38
Source-reported events for the cited work
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Observation 7f905a28-be1b-47af-ae2e-f86b379d9f4d · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem E.; Cavalli, A
Reference 39
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation f98770bf-cab3-48b3-bdb7-de210e4396c6 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Unresolved cited work
Reference 40
Source-reported events for the cited work
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Observation 37e85900-1b3b-469f-85c5-c67b0ef2fc53 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem F.; Zhang, S.; Vendruscolo, M
Reference 41
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 5996cef8-547b-4e01-a5f4-9c5e963ecbbe · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem PYCV: a PLUMED 2 Module Enabling the Rapid Prototyping of Collective Variables in Python
Reference 42
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 066867cc-7f81-4955-8716-974078a20c67 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Unresolved cited work
Reference 43
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 07ae51d5-cdb2-4bf7-98b8-c56c60b8bf49 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem M.; Pietrucci, F
Reference 44
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 37757052-a364-4711-98bf-b1afcab8853d · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Ab initio metadynamics determination of temperature-dependent free-energy landscape in ultrasmall silver clusters
Reference 45
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation c2478e29-a734-494b-bf2a-4f0183f9dabe · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem Characterizing RNA oligomers using Stochastic Titration Constant-pH Metadynamics simulations
Reference 46
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation 4b392386-89c9-4858-b460-b436f9d64844 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem A Bias-Exchange Approach to Protein Folding
Reference 47
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation f995c583-f514-4de4-b654-7dd3dfb9f9a6 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem V.; Garey, M
Reference 48
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.
Observation bf5855c6-a22b-4492-aeea-a913f61834e6 · outbound
PLUMED Tutorials: a collaborative, community-driven learning ecosystem The need to implement FAIR principles in biomolecular simulations
Reference 49
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 78feb186-6547-4b95-a6f3-ba126d8e0330 · inbound
Machine Learning of Slow Collective Variables and Enhanced Sampling via Spatial Techniques PLUMED Tutorials: a collaborative, community-driven learning ecosystem
Reference 168
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 7e34ac8a-4a9f-494a-b863-113ea7b51d1f · inbound
Elucidating Ion Capture and Transport Mechanisms of Preyssler Anions in Aqueous Solutions Using Biased MACE-Accelerated MD Simulations PLUMED Tutorials: a collaborative, community-driven learning ecosystem
Reference 94
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.