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Paper Citation Record · LEDGER

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL

As of 12 August 2026, this Paper Citation Record lists 13 of 13 outbound references and 0 inbound Pith citation observations for arXiv:2502.00508.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2502.00508 v1

Coverage vector

measured 13 of 13 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-09T18:44:33.013727Z

measured 13 of 13 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-11T06:34:44.6726+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

13 of 13 outbound references displayed

  • verified exact1
  • verified fuzzy3
  • unresolved9
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 7800f383-61a5-4211-b5ab-e61cf00cecb9 · outbound

This paper cites Pyqt5 documentation, 2025.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Pyqt5 documentation, 2025

Reference 1

Resolution
verified fuzzy
raw_fallback, observed 2026-08-09T18:44:33.190060Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-08-09T18:44:32.952743Z digest=sha256:ba42159854f564cd2f65c2a22636bb1bb856df52617d1ffbe679d0a4a95750c7

Observation e7541da2-3990-46d1-a072-2869c08bc90d · outbound

This paper cites Qt framework, 2025.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Qt framework, 2025

Reference 2

Resolution
verified fuzzy
raw_fallback, observed 2026-08-09T18:44:33.175163Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-08-09T18:44:32.958617Z digest=sha256:4df3a75d868f25c28ecabcdb0468fcccdc55be0a3e4e8a42671104c1e2318dbd

Observation b9009c1f-8f7e-429c-9934-e43910a2afdf · outbound

This paper cites Boltz-1: Democratizing Biomolecular Interaction Modeling.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Boltz-1: Democratizing Biomolecular Interaction Modeling

Reference 3

Resolution
unresolved
no resolver link, observed 2026-08-09T18:44:32.963480Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-09T18:44:32.963480Z digest=sha256:1c10cef66abec2ca13a409e40c8825434b05fd2f7be943de9fcb78da6141d087

Observation 5742743d-50df-426a-984f-f22cad322abb · outbound

This paper cites Chai-1: Decoding the molecular interactions of life.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Chai-1: Decoding the molecular interactions of life

Reference 4

Resolution
unresolved
no resolver link, observed 2026-08-09T18:44:32.968537Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-09T18:44:32.968537Z digest=sha256:af8078c3ef4bf004d97ad3af161ddbaf2fed18fc21fe1ef7cfc920467be98039

Observation 890f0016-c947-4f22-9155-c5f3fecdd85b · outbound

This paper cites Protenix: Advancing structure prediction through a comprehensive alphafold3 reproduction.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Protenix: Advancing structure prediction through a comprehensive alphafold3 reproduction

Reference 5

Resolution
verified fuzzy
raw_fallback, observed 2026-08-09T18:44:33.159583Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-08-09T18:44:32.973360Z digest=sha256:b94b8d47776426982dcd90b651dcb03860ef67e2b8e258b390d4e73ff668e1f6

Observation 13990ad9-7d84-4f29-a86e-34b55c051096 · outbound

This paper cites Sofroniew, Deniz Oktay , Zeming Lin, Robert Verkuil, Vincent Q.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Sofroniew, Deniz Oktay , Zeming Lin, Robert Verkuil, Vincent Q

Reference 6

Resolution
unresolved
no resolver link, observed 2026-08-09T18:44:32.978877Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-09T18:44:32.978877Z digest=sha256:a5568b662244929e960ade8424dbf37f9a3933702cff80bcb2a1973229e2dec5

Observation d21ef792-359f-4f53-87e1-e4ad2c1905c6 · outbound

This paper cites Berman, John Westbrook, Zukang Feng, Gary Gilliland, T.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Berman, John Westbrook, Zukang Feng, Gary Gilliland, T

Reference 7

Resolution
unresolved
no resolver link, observed 2026-08-09T18:44:32.984696Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-09T18:44:32.984696Z digest=sha256:6caad4acc9a7c3a7ae5084af03b3da63934ac339d320b1da27cd72bb74a95f98

Observation e9fe83e2-aaec-4043-ab28-acdcb49cce0d · outbound

This paper cites Alphafold protein structure database in 2024: providing structure coverage for over 214 million protein sequences.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Alphafold protein structure database in 2024: providing structure coverage for over 214 million protein sequences

Reference 8

Resolution
unresolved
no resolver link, observed 2026-08-09T18:44:32.989645Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-09T18:44:32.989645Z digest=sha256:aaa45617d931333bf0382ef4a392cd1ed28f52da5a9568c7b2d7f07b821e3a5b

Observation 605e6cd4-e5e6-403c-b17c-2ca50ab80a03 · outbound

This paper cites Berman, David Jones, Steven E.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Berman, David Jones, Steven E

Reference 9

Resolution
verified exact
doi, observed 2026-08-09T18:44:33.132552Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-08-09T18:44:32.994556Z digest=sha256:f00f6cf223091313cfd873e9554d66690f57ceea12fe0e6707b42648d298bdc1

Observation a6d05b09-464b-428d-b9e8-c6793765c838 · outbound

This paper cites UniProt: the Universal Protein Knowledgebase in 2025.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL UniProt: the Universal Protein Knowledgebase in 2025

Reference 10

Resolution
unresolved
no resolver link, observed 2026-08-09T18:44:32.999389Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-09T18:44:32.999389Z digest=sha256:f105c81f919d34ba8d001121a52797b27cfd16ff5f4352c4e2f105862f5cf257

Observation e14071e9-adb1-4df5-b280-b676aebb7c29 · outbound

This paper cites an unresolved cited work.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Unresolved cited work

Reference 11

Resolution
unresolved
no resolver link, observed 2026-08-09T18:44:33.004314Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-09T18:44:33.004314Z digest=sha256:47b01b64b69e940e45da0e187695db6ce91e811bc3ed8869fc8a06bbb5c68a89

Observation 820ce5dd-f10a-4c7a-9741-47796b922a6e · outbound

This paper cites Ballard, Joshua Bambrick, Sebastian W.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Ballard, Joshua Bambrick, Sebastian W

Reference 12

Resolution
unresolved
no resolver link, observed 2026-08-09T18:44:33.009246Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-09T18:44:33.009246Z digest=sha256:ea9211712ee141252cbd0adec1746cd0afac359bb1e5abaacab322c293c03f54

Observation d3ff9c13-03db-4d75-b321-c8f8ad75d7a0 · outbound

This paper cites Colabfold: making protein folding accessible to all.

PyMOLfold: Interactive Protein and Ligand Structure Prediction in PyMOL Colabfold: making protein folding accessible to all

Reference 13

Resolution
unresolved
no resolver link, observed 2026-08-09T18:44:33.013727Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-09T18:44:33.013727Z digest=sha256:bdeccb776506d58ffa35d1b2203f8e6c8f2fd5ff4a127936d83c257416166be7

Pith citing papers

No inbound Pith citation observations are available.