Pith. sign in

Paper Citation Record · LEDGER

Persistent Sheaf Laplacian Analysis of Protein Flexibility

As of 14 August 2026, this Paper Citation Record lists 52 of 52 outbound references and 0 inbound Pith citation observations for arXiv:2502.08772.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2502.08772 v2

Coverage vector

measured 52 of 52 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-07T23:47:09.153039Z

measured 52 of 52 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-14T06:32:32.682623+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

52 of 52 outbound references displayed

  • verified exact0
  • verified fuzzy48
  • unresolved4
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 504647e5-54b8-4fda-a517-85874d396347 · outbound

This paper cites Protein structure and function.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Protein structure and function

Reference 1

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.731773Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:08.965148Z digest=sha256:74c8aa2f5272c6f5f52de143e22c0e7e829c3ed67bf744e1f6084ca4b8095db6

Observation cf9ea107-9548-4009-aab3-07c983f73ac0 · outbound

This paper cites Introduction to protein structure.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Introduction to protein structure

Reference 2

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.721009Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:08.969654Z digest=sha256:b95f023bf0a449c0c4ff6b40382a4657a89e51f23aee8b3b0a6b1ef90e43daf1

Observation fc20e136-a5c4-45b2-b824-2a46ca5c1eac · outbound

This paper cites Protein flexibility and intrinsic disorder.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Protein flexibility and intrinsic disorder

Reference 3

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.710851Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:08.973695Z digest=sha256:987d5cea63fa65c0dd7686a81615daeea3c43b723ab3b290cceb6ddf62237bd2

Observation c7369fa6-fe1c-41d2-b376-53b014ea6ca1 · outbound

This paper cites an unresolved cited work.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Unresolved cited work

Reference 4

Resolution
unresolved
raw_fallback, observed 2026-08-07T23:47:09.700861Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:08.977536Z digest=sha256:dd8d4114ee375e01c1f9d6e01357898624b3bd107061b7f2d248473f993da0e5

Observation c3820b87-027e-4258-8ab4-49c84d25eacb · outbound

This paper cites Atom-specific persistent homology and its application to protein flexibility analysis.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Atom-specific persistent homology and its application to protein flexibility analysis

Reference 5

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.690878Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:08.981643Z digest=sha256:8f6059f87b091007011ed79fb5378693dc640693eeadecaf120f7ccde6d873a4

Observation 77f4ea08-2699-4d2c-8438-db74b11831ac · outbound

This paper cites Prediction of protein B-factor profiles.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Prediction of protein B-factor profiles

Reference 6

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.680850Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:08.985651Z digest=sha256:a2308e41ebaec16400d398bec4359036fd082686bf2c4ec4c408707f45dd2dd9

Observation bb8f1039-21b3-4570-b420-0e94b11094eb · outbound

This paper cites Usefulness and limitations of normal mode analysis in modeling dynamics of biomolecular complexes.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Usefulness and limitations of normal mode analysis in modeling dynamics of biomolecular complexes

Reference 7

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.670567Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:08.989933Z digest=sha256:32f1121f7858eac5e50622df3f05e8dd6bc7bd37011afb60e38bcc4e308e1c3b

Observation a53b14d6-de77-4ed6-8780-88ada8b4c0aa · outbound

This paper cites Accuracy of protein flexibility predictions.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Accuracy of protein flexibility predictions

Reference 8

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.660531Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:08.993448Z digest=sha256:cc507e3b36005ad5187f80d1dd71fcd35fa2ef68a72e0691ab5e54691e548448

Observation 85e97643-ca58-4576-93dc-c051231b0b0a · outbound

This paper cites Protein flexibility predictions using graph theory.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Protein flexibility predictions using graph theory

Reference 9

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.650167Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:08.997137Z digest=sha256:e79f391998df2f4b95e103f1f7ce548bb117e743f52558cf043340f7a228b0ba

Observation 503131c7-c355-41d9-a4c3-0fbd2b2c333a · outbound

This paper cites Flexserv: an integrated tool for the analysis of protein flexibility.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Flexserv: an integrated tool for the analysis of protein flexibility

Reference 10

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.639787Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.000891Z digest=sha256:09b68c0cb7217726d5df2d71bdaf351aae24c5c37cf4b6db6e786ad805aaa878

Observation ebc56cd6-ef4b-49c3-a89c-bc376491053c · outbound

This paper cites Andrew McCammon, Bruce R.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Andrew McCammon, Bruce R

Reference 11

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.629937Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.004896Z digest=sha256:f816b752d3f5e233c39298b44758c59ea663bb0355eec3aabbe51542b51684e6

Observation c7dd0d55-838e-4b6b-9101-8ba0e8543b5b · outbound

This paper cites Bennett Jr.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Bennett Jr

Reference 12

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.620004Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.008763Z digest=sha256:a2c63bbd9d97ecd82c260049390cc13d9c64557f0c0f217c41e115d72757bcba

Observation ab059382-7a71-4e39-8579-42a871b29141 · outbound

This paper cites Multiscale multiphysics and multidomain models—flexibility and rigidity.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Multiscale multiphysics and multidomain models—flexibility and rigidity

Reference 13

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.609462Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.012611Z digest=sha256:ea6594f9c9466ce5320903530bf11e11fd095976bfe96c2f57e8cd7f2dbc9f0f

Observation e7e7dadd-8461-463c-8eca-43416d64add0 · outbound

This paper cites Coarse grained normal mode analysis vs.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Coarse grained normal mode analysis vs

Reference 14

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.599134Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.016253Z digest=sha256:f77ef0e6713679d2b054c8d53cfaabf08d633362ce4fc06d334a4cdd61cfb74f

Observation bf67bb69-2cb5-4628-9a1d-8217fade43f3 · outbound

This paper cites Ataka, Anil M.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Ataka, Anil M

Reference 15

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.588524Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.019860Z digest=sha256:fdda9b14551c0596402eb76c5ceb4c394466a20802be5b5fc2b7deffa899be9d

Observation 26f23168-b957-4926-87e0-8e0124ca282d · outbound

This paper cites Brooks, Robert E.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Brooks, Robert E

Reference 16

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.578199Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.023388Z digest=sha256:2ae16555f065e6aa8ba0b7dbf36a96788e5d92eb3fcab7872ac1fbf8607516e4

Observation 63fa8ec5-c453-4304-bb99-20eb0d321415 · outbound

This paper cites Dynamics of a small globular protein in terms of low- frequency vibrational modes.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Dynamics of a small globular protein in terms of low- frequency vibrational modes

Reference 17

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.567761Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.027034Z digest=sha256:fb5dc6636cc7838b28395590659f2083e22dd1494a8c728c644f40989b9fefdc

Observation b43451ba-9c32-4227-95da-035caec744e1 · outbound

This paper cites an unresolved cited work.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Unresolved cited work

Reference 18

Resolution
unresolved
raw_fallback, observed 2026-08-07T23:47:09.557055Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.030573Z digest=sha256:69681b9f955107ee7f289ae8a0bacd143aff79af27e7297b38599f6e7f1acdcd

Observation 5d038a75-6832-434d-bbfd-773bf0cda7dd · outbound

This paper cites Anisotropy of fluctuation dynamics of proteins with an elastic network model.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Anisotropy of fluctuation dynamics of proteins with an elastic network model

Reference 19

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.546729Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.034353Z digest=sha256:d1934b3e5740a9395fe0f520e7013b5495163db55d4a9272bf2cce3304953e12

Observation 86f209b8-0cce-462a-a84e-ee99daf80f32 · outbound

This paper cites Demirel, and Burak Erman.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Demirel, and Burak Erman

Reference 20

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.536387Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.038037Z digest=sha256:f321b42379c3f28798eefa3078bc3913654ec8b684a025e952bbc60058dadc7f

Observation a3a94851-f597-4ebb-9b15-c84b03ff3b01 · outbound

This paper cites Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential

Reference 21

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.525694Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.041489Z digest=sha256:04f45db8736db5d5ed8af6eba7a5b35f15af4c9ccf85a9afa426775873a79fe4

Observation 41e5fb25-622c-4a08-af6d-d409a8b9c1c5 · outbound

This paper cites Analysis of domain motions by approximate normal mode calculations.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Analysis of domain motions by approximate normal mode calculations

Reference 22

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.515705Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.045099Z digest=sha256:bd0493f67a3bbf6562c401e8074ba66a186c2b92db89c47ab02d150556cc8d30

Observation a10affb1-5d89-4c55-ba26-f079978c61d5 · outbound

This paper cites A coarse-grained normal mode approach for macromolecules: An efficient imple- mentation and application to Ca2+-ATPase.

Persistent Sheaf Laplacian Analysis of Protein Flexibility A coarse-grained normal mode approach for macromolecules: An efficient imple- mentation and application to Ca2+-ATPase

Reference 23

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.505138Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.048824Z digest=sha256:11ddf55cfb1fc20e93ff51749d35c33602bb301da7e088bb0453b7af7b37a4a6

Observation f421edab-d59a-456e-ae7b-7e015df1f05a · outbound

This paper cites Conformational change of proteins arising from normal mode calculations.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Conformational change of proteins arising from normal mode calculations

Reference 24

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.494989Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.052449Z digest=sha256:ab975a7c90579c76bc67b3e46f998b2c69c7dd6190b7f72ddfe9ea421ad2823f

Observation d1869ae5-15e9-4122-b822-3fb918d390e8 · outbound

This paper cites Fast and anisotropic flexibility-rigidity index for protein flexibility and fluctuation analysis.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Fast and anisotropic flexibility-rigidity index for protein flexibility and fluctuation analysis

Reference 25

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.484296Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.055929Z digest=sha256:e8e660b2b0ecf3c2b6e9ffbaf1e4a8ff0733bb0dd1ce6e51c09e7298ae68fcb7

Observation 4ee4c040-bcee-4817-9dad-491ea52b3950 · outbound

This paper cites Multiscale Gaussian network model (mGNM) and multiscale anisotropic network model (mANM).

Persistent Sheaf Laplacian Analysis of Protein Flexibility Multiscale Gaussian network model (mGNM) and multiscale anisotropic network model (mANM)

Reference 26

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.473291Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.059790Z digest=sha256:d76cec46575f9be41fb92516a626ac3b2f671b64720f5c0d79536c35eb33033e

Observation cfe95a20-cd8e-4bc6-8ea9-6b978be3e99d · outbound

This paper cites Statistical thermodynamics of random networks.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Statistical thermodynamics of random networks

Reference 27

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.462644Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.063605Z digest=sha256:f9200d1f978873ac7c6e9e3501448192659f1d86990d0fd50be3db6bb9d79f7a

Observation 0f7d7854-167e-4db5-90b1-95ffbdfa4421 · outbound

This paper cites Gaussian dynamics of folded proteins.Physical Review Letters, 79:3090–3093, Oct 1997.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Gaussian dynamics of folded proteins.Physical Review Letters, 79:3090–3093, Oct 1997

Reference 28

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.452050Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.067180Z digest=sha256:c7b1abd2e37e509c9065b0f75c10e223de896c3491b80547e15cf813c2a8091e

Observation fe5b6213-b60f-49ee-b5d8-93adf55ce69e · outbound

This paper cites Coarse-grained models reveal functional dynamics - i.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Coarse-grained models reveal functional dynamics - i

Reference 29

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.441271Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.070676Z digest=sha256:8f24f07eed88fbfab3b710b7c2285b568579fd27fd1efbbccbdf26e408369380

Observation fe852ce0-a1fc-4f2d-a230-a02978807e86 · outbound

This paper cites Communication: Capturing protein multiscale thermal fluctu- ations.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Communication: Capturing protein multiscale thermal fluctu- ations

Reference 30

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.430596Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.074031Z digest=sha256:aaf2e6fb7e3a9285a680f067fd3095015474098fa66f6091db784ed155f0ac6a

Observation a7737147-cb86-4c86-a86b-d66cc8df1db9 · outbound

This paper cites Protein flexibility and rigidity predicted from sequence.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Protein flexibility and rigidity predicted from sequence

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.419842Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.077571Z digest=sha256:4a16e977b5016aaa52bd639e44ff31f2f37f90403653f1ca3b6fdb14f7f5339a

Observation 08e88018-4bd8-4eab-927e-447708064fe1 · outbound

This paper cites Predyflexy: flexibility and local structure prediction from sequence.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Predyflexy: flexibility and local structure prediction from sequence

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.409398Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.080983Z digest=sha256:a0ebbc04906f1ac864e70b6ed2ebc305757a49d0b8f328d4fb832d2d0269e300

Observation fc87bb46-d40a-4f66-86fa-e8670d0bc3df · outbound

This paper cites MEDUSA: prediction of protein flexibility from sequence.

Persistent Sheaf Laplacian Analysis of Protein Flexibility MEDUSA: prediction of protein flexibility from sequence

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.397895Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.084538Z digest=sha256:1d6bf608db519288a5c9db4893eb5c7255f36a555692632d8bbb782de8aeb5cf

Observation a7c08128-369b-4f2e-a54b-64ac51b82702 · outbound

This paper cites Deep learning model for efficient protein– ligand docking with implicit side-chain flexibility.Journal of Chemical Information and Modeling, 63(6):1695– 1707, 2023.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Deep learning model for efficient protein– ligand docking with implicit side-chain flexibility.Journal of Chemical Information and Modeling, 63(6):1695– 1707, 2023

Reference 34

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.385089Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.088097Z digest=sha256:3d7d22213295f1e9bb572bbf436726b9fe66856a6839a8fe231af0f7c9a9cddd

Observation c477ac7a-7979-4a2f-b3ec-f7c95c3f4264 · outbound

This paper cites Accurate prediction of protein structural flexibility by deep learning integrating intricate atomic structures and cryo-em density information.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Accurate prediction of protein structural flexibility by deep learning integrating intricate atomic structures and cryo-em density information

Reference 35

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.373593Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.091823Z digest=sha256:2c1f6a2b4669659ea5c650fe481f88879c37676068f5357f8ea9e63418190d2c

Observation 4f4f063e-bc4b-458b-acec-f4b29acd3921 · outbound

This paper cites Opus-bfactor: Predicting protein b-factor with sequence and structure information.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Opus-bfactor: Predicting protein b-factor with sequence and structure information

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.362018Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.095312Z digest=sha256:63907127328453be163c2e12637bc619ea55318853e4e57cdace11dd14d9847c

Observation 309ed80a-5efb-4377-85b8-49dd5d30b479 · outbound

This paper cites Persistent spectral graph.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Persistent spectral graph

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.350604Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.099013Z digest=sha256:ab234a8d48887cbc57eb2962dc49a2d8cd3c6357f41c34ed915cc409d0ecd31e

Observation f37fbbbc-efeb-4677-92c0-66a616ceff6c · outbound

This paper cites Evolutionary de rham-hodge method.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Evolutionary de rham-hodge method

Reference 38

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.339648Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.102548Z digest=sha256:ee05ae5693d6a80a22a6acc96e0b43cd8f5373d6f06768777f2094bba87b2710

Observation 07afa5dd-aea5-4a90-854d-94b15291dd55 · outbound

This paper cites Topology and data.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Topology and data

Reference 39

Resolution
unresolved
no resolver link, observed 2026-08-07T23:47:09.106036Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T23:47:09.106036Z digest=sha256:7146ba3d66b67eb02b81701ae29431701927bb61cbf731ba13a3ba427101a7cd

Observation 58dbed6b-c6ad-48a3-a55b-4d969838ecc1 · outbound

This paper cites Persistent homology-a survey.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Persistent homology-a survey

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.322017Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.109405Z digest=sha256:ff4c78e8f4231a88a63f398142aea4028eeac4c6d664952bcf8799603693729c

Observation b3ff898a-be78-4416-a7b2-991b0e4a2533 · outbound

This paper cites Persistent sheaf Laplacians.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Persistent sheaf Laplacians

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.311686Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.112926Z digest=sha256:2222aafd8e6fba8f8ac69d066c13837a2240a387a298a59db25d17dcc930112a

Observation 9be524fc-f75b-41cb-abb8-35730c1a1def · outbound

This paper cites Persistent topological Laplacians–a survey.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Persistent topological Laplacians–a survey

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.300537Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.116391Z digest=sha256:f5ecb0cca5fb7e45c694199385b39ca54f0b0106275ac7c56550e1866d9b1c6e

Observation 7c7417ea-1367-48ba-a609-482c10750339 · outbound

This paper cites Bernstein, Thomas F.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Bernstein, Thomas F

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.289671Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.120127Z digest=sha256:c608456f11c3c11b96fbf86eaca328fc04ed5a781886f62cc72a13be08fbddc6

Observation 4669af77-2549-478c-97e0-25b58db3af92 · outbound

This paper cites VMD: Visual molecular dynamics.

Persistent Sheaf Laplacian Analysis of Protein Flexibility VMD: Visual molecular dynamics

Reference 44

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.279149Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.123589Z digest=sha256:dc64211e90ac3f8a9f914482212f8efe5ea66b1fdf49cbcd6aed2a680ea4e892

Observation 1c4a1d75-8e28-47be-a7a3-c9011f1ca5f6 · outbound

This paper cites STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins.

Persistent Sheaf Laplacian Analysis of Protein Flexibility STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins

Reference 45

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.268503Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.127259Z digest=sha256:73f056973e48e981c640795e6e9f9de06dabf49acb86ea17255883d5b91d400a

Observation 28c4dedf-a36f-480d-bc45-15c0158a60bf · outbound

This paper cites A fast graph-based data classification method with applications to 3d sensory data in the form of point clouds.

Persistent Sheaf Laplacian Analysis of Protein Flexibility A fast graph-based data classification method with applications to 3d sensory data in the form of point clouds

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.257162Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.130957Z digest=sha256:39f86ab59eb542e2d87fce152455b20567eec2589553bbd01a5c8a60b07ef69d

Observation 5a12cba8-59cd-4b62-bbf7-89e85bab806c · outbound

This paper cites Multiclass data segmentation using diffuse interface methods on graphs.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Multiclass data segmentation using diffuse interface methods on graphs

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.245313Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.134504Z digest=sha256:c640aeca699f90732213bb4659bb371c4ee192b851f8dd6ad168c17a331cf04a

Observation 04d911e2-96f9-49a5-89fe-7f8a9c9b7a73 · outbound

This paper cites Diffuse interface methods for multiclass segmentation of high-dimensional data.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Diffuse interface methods for multiclass segmentation of high-dimensional data

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.233998Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.137866Z digest=sha256:bc72eeaf3ce8c5b9d0f76bcc782439b5ada8e825af0b14a140d8a4eb07e47697

Observation f3615166-2c38-49aa-92be-3e2be98dda46 · outbound

This paper cites Integration of element specific persistent homology and machine learning for protein-ligand binding affinity prediction.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Integration of element specific persistent homology and machine learning for protein-ligand binding affinity prediction

Reference 49

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.222254Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.141263Z digest=sha256:63581b712c24aa62244d56299a5559233caa461ce74120bb96d27b455c3b50cb

Observation 8d73210e-22fb-433f-99a9-7e90f282dbdc · outbound

This paper cites Learning sheaf laplacians from smooth signals.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Learning sheaf laplacians from smooth signals

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.210062Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.144974Z digest=sha256:fc427d112035badc93cec70cad0d9997c02fd3215f3c2fc38fff3a898966a5dc

Observation 267683cb-b64a-4fdb-916b-f19cf8b8ce69 · outbound

This paper cites Persistent sheaf cohomology.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Persistent sheaf cohomology

Reference 51

Resolution
unresolved
no resolver link, observed 2026-08-07T23:47:09.148666Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T23:47:09.148666Z digest=sha256:51d539d664338c9a3cd0a8ffeacbb4ca7064ef86335ace34576eca1a65344d30

Observation 85993457-c630-4da4-b99e-a42558ca8799 · outbound

This paper cites Evolutionary homology on coupled dynamical systems with applications to protein flexibility analysis.

Persistent Sheaf Laplacian Analysis of Protein Flexibility Evolutionary homology on coupled dynamical systems with applications to protein flexibility analysis

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T23:47:09.197950Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

source=pdf_text observed=2026-08-07T23:47:09.153039Z digest=sha256:8d267fa0b633719c1f0989a5841a43d796b85b013182b043875b178aa2089357

Pith citing papers

No inbound Pith citation observations are available.