Paper Citation Record · LEDGER

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule

As of 17 August 2026, this Paper Citation Record lists 34 of 34 outbound references and 1 inbound Pith citation observation for arXiv:2505.07286.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2505.07286 v2

Coverage vector

measured 34 of 34 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-15T22:25:04.935289Z

measured 35 of 35 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-17T06:30:58.91139+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-06T20:15:02.867416Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-08-06T20:15:04.566309Z

Reference resolution

34 of 34 outbound references displayed

verified exact1
verified fuzzy16
unresolved17
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 55198011-dfc4-4ce0-ab3c-97fa85bd54aa · outbound

This paper cites J., Bambrick, J., et al.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule J., Bambrick, J., et al

Reference 1

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.812878Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 8dbc8eaa-f9b4-4c25-a62b-8f1b67412b81 · outbound

This paper cites and Fiorucci, S.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule and Fiorucci, S

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.371909Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation e177e4e2-1496-481d-874f-dd6d1cadeda6 · outbound

This paper cites M., and Deane, C.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule M., and Deane, C

Reference 3

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.821300Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 95287b2a-6ef0-4f78-9b27-3c8a76842e94 · outbound

This paper cites Generative flows on discrete state-spaces: Enabling multimodal flows with applications to protein co-design.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Generative flows on discrete state-spaces: Enabling multimodal flows with applications to protein co-design

Reference 4

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.825243Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 3dbfc481-17d2-4048-b70e-0e3351db2d21 · outbound

This paper cites Diffdock: Diffusion steps, twists, and turns for molecular docking.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Diffdock: Diffusion steps, twists, and turns for molecular docking

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.348257Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 28f27b79-c398-40ac-ab46-fc93def3749f · outbound

This paper cites Continuous diffusion for categorical data.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Continuous diffusion for categorical data

Reference 6

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.832805Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation b8ea793f-ccca-4811-850f-759b5853f4fb · outbound

This paper cites F., and Forli, S.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule F., and Forli, S

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.337064Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 8b98d899-f320-4edd-9452-bc1659289aa6 · outbound

This paper cites G., Masuda, T., Sunseri, J., Jia, A., Iovanisci, R.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule G., Masuda, T., Sunseri, J., Jia, A., Iovanisci, R

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.325735Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation adc1bcd4-3243-4337-8ced-18e1dffcdcef · outbound

This paper cites Bayesian Flow Networks.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Bayesian Flow Networks

Reference 9

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.844496Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 7a4de0c7-2872-40e0-935b-5f396484637f · outbound

This paper cites W., Peng, X., Su, Y., Peng, J., and Ma, J.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule W., Peng, X., Su, Y., Peng, J., and Ma, J

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.312848Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 9bbd5234-326b-438b-b27c-8a767c05310f · outbound

This paper cites D ecomp D iff: Diffusion models with decomposed priors for structure-based drug design.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule D ecomp D iff: Diffusion models with decomposed priors for structure-based drug design

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.298614Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 9b411d5a-3fe8-4945-9377-e34abd095cf6 · outbound

This paper cites Benchmarking Generated Poses: How Rational is Structure-based Drug Design with Generative Models?.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Benchmarking Generated Poses: How Rational is Structure-based Drug Design with Generative Models?

Reference 12

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.855698Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 6d60ba64-e6aa-4f4e-8e4e-fd4176bc9656 · outbound

This paper cites Interaction-based retrieval-augmented diffusion models for protein-specific 3d molecule generation.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Interaction-based retrieval-augmented diffusion models for protein-specific 3d molecule generation

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.285169Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 14343018-cc06-4e3c-ab49-1205c6e13032 · outbound

This paper cites Protein-ligand interaction prior for binding-aware 3d molecule diffusion models.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Protein-ligand interaction prior for binding-aware 3d molecule diffusion models

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.271715Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation ea5d7c35-4a44-405b-ab4d-6e0070edead0 · outbound

This paper cites Structure-based drug design with geometric deep learning.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Structure-based drug design with geometric deep learning

Reference 15

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.866536Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 3b54813d-4cf5-47e8-a58f-d76d7bd19dfa · outbound

This paper cites C., Leach, A.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule C., Leach, A

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.260841Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation d36bf39b-63a7-49ed-b8e3-c06211220f80 · outbound

This paper cites Variational diffusion models.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Variational diffusion models

Reference 17

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.873784Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 734a07f5-6905-4269-8b0e-5acf7502ea5e · outbound

This paper cites Functional-Group-Based Diffusion for Pocket-Specific Molecule Generation and Elaboration.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Functional-Group-Based Diffusion for Pocket-Specific Molecule Generation and Elaboration

Reference 18

Resolution: verified exact; local_arxiv, observed 2026-08-15T22:25:05.015117Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 88cb50e2-a7e5-4af0-844a-54b04996ede6 · outbound

This paper cites Generating 3d molecules for target protein binding.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Generating 3d molecules for target protein binding

Reference 19

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.881398Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 8631b4d6-302e-4768-885a-93c0bba27afa · outbound

This paper cites A 3D Generative Model for Structure-Based Drug Design.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule A 3D Generative Model for Structure-Based Drug Design

Reference 20

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.885205Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation ac65c014-ee24-4554-88dd-b5fa7fc078cd · outbound

This paper cites A., and Wegner, J.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule A., and Wegner, J

Reference 21

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.888864Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation ed1fd4e9-255b-4867-83ed-f52f84242aeb · outbound

This paper cites P ocket2 M ol: Efficient molecular sampling based on 3 D protein pockets.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule P ocket2 M ol: Efficient molecular sampling based on 3 D protein pockets

Reference 22

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.227134Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 620953e5-b5c1-4e51-b0f7-0282787f3d56 · outbound

This paper cites Moldiff: Addressing the atom-bond inconsistency problem in 3d molecule diffusion generation.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Moldiff: Addressing the atom-bond inconsistency problem in 3d molecule diffusion generation

Reference 23

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.213477Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation c7b38647-389a-4e39-abad-cde5b30102eb · outbound

This paper cites S., Yu, H.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule S., Yu, H

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.200823Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation f95a0801-1eaf-4aa1-8664-0b2464bbd0f2 · outbound

This paper cites Empower structure-based molecule optimization with gradient guidance.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Empower structure-based molecule optimization with gradient guidance

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.188434Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation a7ee543d-6da3-46db-ba30-00f9e256b137 · outbound

This paper cites Mol CRAFT : Structure-based drug design in continuous parameter space.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Mol CRAFT : Structure-based drug design in continuous parameter space

Reference 26

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.176241Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 361d7e76-ac03-4e00-a493-576e07a2ec4c · outbound

This paper cites Structure-based Drug Design with Equivariant Diffusion Models.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Structure-based Drug Design with Equivariant Diffusion Models

Reference 27

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.910549Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation bff4cd24-358c-4fb6-bd4c-a9583b124718 · outbound

This paper cites Unified Generative Modeling of 3D Molecules via Bayesian Flow Networks.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Unified Generative Modeling of 3D Molecules via Bayesian Flow Networks

Reference 28

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.914332Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation c5ff686a-77ce-43f0-9c4f-7c4c1ff51523 · outbound

This paper cites Equivariant flow matching with hybrid probability transport for 3d molecule generation.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Equivariant flow matching with hybrid probability transport for 3d molecule generation

Reference 29

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.163947Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 7b459c0e-6b0f-4f91-b9fa-3a3d91e379a6 · outbound

This paper cites and S \"o ding, J.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule and S \"o ding, J

Reference 30

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.921346Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 6499c1cc-5dfd-4b71-81eb-cc0b07e0eb87 · outbound

This paper cites MiDi: Mixed Graph and 3D Denoising Diffusion for Molecule Generation.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule MiDi: Mixed Graph and 3D Denoising Diffusion for Molecule Generation

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.924456Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation bb282654-efc4-47c0-86ad-dedd1fbf307d · outbound

This paper cites Molecule generation for target protein binding with structural motifs.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Molecule generation for target protein binding with structural motifs

Reference 32

Resolution: verified fuzzy; raw_fallback, observed 2026-08-15T22:25:05.141924Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 1e0e7b84-91b4-4a32-8900-b36743563bfc · outbound

This paper cites Uni-mol: A universal 3d molecular representation learning framework.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule Uni-mol: A universal 3d molecular representation learning framework

Reference 33

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.932151Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 4f4929af-4d4c-45d8-a07a-9cc6103dc24c · outbound

This paper cites write newline.

Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule write newline

Reference 34

Resolution: unresolved; no resolver link, observed 2026-08-15T22:25:04.935289Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Pith citing papers

Observation f5f14e6b-c8ea-4c5e-8ff3-f6fa86d864ba · inbound

Kinetic Langevin Diffusion for Crystalline Materials Generation cites this paper.

Kinetic Langevin Diffusion for Crystalline Materials Generation Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule

Reference 2011

Resolution: verified exact; local_arxiv, observed 2026-08-06T20:15:04.644614Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.