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Paper Citation Record · LEDGER

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models

As of 8 August 2026, this Paper Citation Record lists 70 of 70 outbound references and 0 inbound Pith citation observations for arXiv:2506.04303.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2506.04303 v1

Coverage vector

measured 70 of 70 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-07T10:52:07.123692Z

measured 70 of 70 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-08T06:32:00.761636+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

70 of 70 outbound references displayed

  • verified exact0
  • verified fuzzy39
  • unresolved31
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation eab2b6cc-123a-4ce0-9aee-4fd43e155370 · outbound

This paper cites Fatumo, T.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Fatumo, T

Reference 1

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.746754Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.933040Z digest=sha256:86f84bf309586541e4273daf3501bccc39dde8190a6ec377972c631ac9df8d2d

Observation 751f9a20-3ec0-4d92-a794-1e0377ea4ea3 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 2

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.738460Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.936658Z digest=sha256:b8e5fcf8a536162ab846b0c5f30c40926999973ca782a05764786ea01b818fa3

Observation 6117c68b-3cd2-4c9f-940a-971e1dd7c5c1 · outbound

This paper cites Kolligundla, K.M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Kolligundla, K.M

Reference 3

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.730054Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.939700Z digest=sha256:269dde2c47d9f8fb26bc6fdc66c49de9da6f9e02c29d6ef136c985e839b26398

Observation 4b16f283-7c0a-47ce-8cab-28dfebcfe582 · outbound

This paper cites Houtekamer, M.C.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Houtekamer, M.C

Reference 4

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.722012Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.942958Z digest=sha256:458df03188daae88aef7f47c780d41a1256fdf01e57bcf6012ec24f4382a1d0f

Observation 22540dde-7c03-4c0f-9f41-c6cffd1a2249 · outbound

This paper cites Zhou, J.G.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Zhou, J.G

Reference 5

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.713347Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.946374Z digest=sha256:52b2be0a6b0bdf49c4350ad4ff54d539f9bd0499f71d292843e270913c2ace66

Observation d8843750-8b6d-43a9-b15b-d1dad67285bf · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 6

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.704795Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.949620Z digest=sha256:f3d3cab06d159c55ca2a04157bd350896c6120506fbae748e307eb6f5b096864

Observation b3c89623-a77f-4d90-a111-d9a9fdd17209 · outbound

This paper cites Hoang, C.H.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Hoang, C.H

Reference 7

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.696229Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.952829Z digest=sha256:d72bf88f8fd58a278323566597f6d7ba67353ab79965122a9aee17160f7a24f4

Observation 24661653-8ad6-49db-b543-af066c978995 · outbound

This paper cites Pickrell, J.C.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Pickrell, J.C

Reference 8

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.687811Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.955590Z digest=sha256:2c609fa83948fd2f75e1c363555bc1a8bc443dcff9432ceee210e8febdcdfebb

Observation 411bf383-d280-4791-9188-92380f2ca9d5 · outbound

This paper cites Parekh, Y.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Parekh, Y

Reference 9

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.679242Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.958257Z digest=sha256:ac4b77dcbed520ecdbe36b0deb362b7a9a1bbbb5dc8d721b4e8bac07b60862d9

Observation 4ed88900-6652-4623-b316-d83859a69738 · outbound

This paper cites Lazzarotto, N.L.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Lazzarotto, N.L

Reference 10

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.671089Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.960974Z digest=sha256:f805b40f9d641c77181deb435447d57c7c280a8e7f55b043ccf3970aee03feea

Observation 08f77746-03af-4e98-85b5-d4121f0c2e6e · outbound

This paper cites Kumar, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Kumar, S

Reference 11

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.662895Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.963507Z digest=sha256:612292ee1a9e6d1501beb22c9b803a3fb7327e247b2f283b9db22b801ed533c3

Observation 43e47623-f1d0-4e7b-8814-4a1210ca843a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 12

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.654905Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.966247Z digest=sha256:e85d470ee5ffea9a9d1e150f42dd3c235f903e8873389c9057d724b5b2c7d2c7

Observation 1338a401-ebe6-476b-9658-c1ce075c7b7f · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 13

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.646703Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.969026Z digest=sha256:9d87dc7ed759bde94f78bcd80162fd01af377cc8bf3a389e6ee8b496f1380662

Observation a6a28a36-d0b7-4a2b-8c86-4d26639e520e · outbound

This paper cites Chang, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Chang, M

Reference 14

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.639078Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.971533Z digest=sha256:d2bb6d097fa31399ebedada11485babc656280b50f8ee999d01be7eacaa761a0

Observation 74051419-f93e-429f-bbf4-30e33fcaf8cc · outbound

This paper cites Subramanian, P.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Subramanian, P

Reference 15

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.631316Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.974179Z digest=sha256:7e7f53ce324b7247a7294a40906e6e18520ab31fd0150fee3e6a6fcf147cc17a

Observation 72611a54-17d9-4e7f-ab67-dd2e7e2a8b36 · outbound

This paper cites Liu, F.F.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Liu, F.F

Reference 16

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.623442Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.976943Z digest=sha256:c1e008f92df43c6ca42b5b1545bf336480f17599f951e4d8ba8a20bbdfde8968

Observation 9c34ecb1-1144-40ff-a431-ff5b9a7b4be5 · outbound

This paper cites Raudvere, L.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Raudvere, L

Reference 17

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.615795Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.979544Z digest=sha256:a53e7bf920f9ee9affb416cd3b823cf30504bf067c2b4593b53dc69ab7f2f2f8

Observation b74c8112-d166-466e-bafb-0bd2eeb135b6 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 18

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.607948Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.982397Z digest=sha256:d9da5611ab04036533a6b5616b672294d722a21466b863cddea7762482ee408b

Observation 2441987a-dde6-4426-8610-707a78e9ff7a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 19

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.599979Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.984963Z digest=sha256:dd0217fbbdc28425f23774b77452318c74963e4f56f98cf168a18fdfb9894334

Observation 53b52ffa-d485-4b53-8199-1e4875bbf734 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 20

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.591559Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.987543Z digest=sha256:6ff737a5aaa68f60fc638efbdd327a0e6bba0f20c6cf381ce9abe25ebcb48e38

Observation 67590e99-2cb0-4cef-abd0-26456c21e934 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 21

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.583220Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.990461Z digest=sha256:44ed81ea616bf38ce203265ca828d7e84ede5041f46beff805634493bb48c995

Observation 1a397366-502c-43b3-bd20-323cd3521643 · outbound

This paper cites GeneAgent: Self-verification Language Agent for Gene Set Knowledge Discovery using Domain Databases.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models GeneAgent: Self-verification Language Agent for Gene Set Knowledge Discovery using Domain Databases

Reference 22

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:06.993086Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:06.993086Z digest=sha256:46766b6b87af2facda75656fc5585b50850dc8204d922428888c08b73e8f1383

Observation eb9dbc84-de42-4cee-be14-fb8bb4e48862 · outbound

This paper cites Aravind, Guilt by association: contextual information in genome analysis.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Aravind, Guilt by association: contextual information in genome analysis

Reference 23

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.574609Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.996082Z digest=sha256:b608a6b8c4ef6ac2845a6fc70a48af2b9ca05ec3527862982e7db5466660b278

Observation 877be535-3c6f-4c92-9830-6da8633bcd61 · outbound

This paper cites Mooney, J.T.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Mooney, J.T

Reference 24

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.565531Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:06.998952Z digest=sha256:c3b72910b34e0588058255507db6544357245df74d44a6878de46e8747c69cd4

Observation 50f0eb36-8f6a-480f-b43f-f19621335da0 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 25

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.556874Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.001526Z digest=sha256:1dd48a9363fbb10ee77b643978094c53f6f031aa3ae53f11af4ee333cbb5888d

Observation 68a530fa-c545-4510-bfc0-4e7fecbd67ae · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 26

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.548883Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.004482Z digest=sha256:97eaa34e3a708a476a0ed29386d6f2d89b64c38da2b21ca1c69c94623b7c6838

Observation 7e58ac97-b0a6-47c1-a99a-ebe23c9dbe3c · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 27

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.540497Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.007372Z digest=sha256:28b86917bb3c6951ee390c542ae9bcff101e24386c5dda9e7f13346d4df4aa2b

Observation 73510a82-8a20-4056-b969-b29ce66d523a · outbound

This paper cites Romanovsky, K.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Romanovsky, K

Reference 28

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.531924Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.010413Z digest=sha256:7b3f893762b770d505e4306d859f6d43755b8f688ffa496c4f8af389723aa1ec

Observation a827951f-9d28-4b77-9980-c63e987a3f93 · outbound

This paper cites Eisfeld, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Eisfeld, S

Reference 29

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.523350Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.013259Z digest=sha256:d14cc12f73ee2b9893cb971b196c240cec2b9222b6fbec351013635f6bace79c

Observation 6587f4e2-378b-474e-9f46-103716e2cf27 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 30

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.513943Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.016152Z digest=sha256:032f4dff1fd81b4007ffa8e8e61a4ed77d7ffb6546f904ede5e4c5c371185212

Observation ac282b93-3498-4649-928e-cdd6606e45ed · outbound

This paper cites Hirsch, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Hirsch, S

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.505455Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.018917Z digest=sha256:2838989484a0fb252db20986727f46e679ac7a1c045050a8ca0979f43162af80

Observation ecff437b-ff2d-4b75-b686-76cc690390ed · outbound

This paper cites Bassez, H.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Bassez, H

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.496261Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.021542Z digest=sha256:21dfb00f15b66f38e5170cb3e464e47874605fcdea1af3d385109ac5b6635a51

Observation ea78aed8-9e1a-4cd1-9a5c-97d0509e3965 · outbound

This paper cites Mering, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Mering, M

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.487676Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.024268Z digest=sha256:a3b1e4ac399daea614963d4ecc155e38c61bf423d5f34906a062d29c74e72ab8

Observation 3a6edbbb-9a02-4a51-afc4-33f5b7c46830 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 34

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.478910Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.026977Z digest=sha256:bab4f8e17e3a514abc27561772a0f900849954bd73406ac0b3a3b2b1ec1723f2

Observation 3bee5951-80cb-47fc-b7b3-2a2e483521eb · outbound

This paper cites GPT-4o System Card.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models GPT-4o System Card

Reference 35

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.029528Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.029528Z digest=sha256:4e73a50af71104cf1e200f7b87b37de84b3d55cf287a4e788d6d34d23fb9e955

Observation ec2e8563-3492-4315-809e-b3510519c77e · outbound

This paper cites Jayakrishnan, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Jayakrishnan, M

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.470369Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.032515Z digest=sha256:99ca6a34dc2640b4acf186ed05a6f05f3eeb114cc39dbb203c2f603ec4693f7b

Observation 4c39b1fc-afd7-4d75-a2f0-a6b3b24b9fc9 · outbound

This paper cites Porcu, M.C.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Porcu, M.C

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.461509Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.035350Z digest=sha256:56485e6d497ca6990f8a8d13a0e6c13a24ca7ddbc5a2d52944a6d7e94c3feb9e

Observation c6a7030c-b9c5-4421-82c3-2370aa7fc553 · outbound

This paper cites GPT-4 Technical Report.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models GPT-4 Technical Report

Reference 38

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.037911Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.037911Z digest=sha256:7c7b909870ef1dec0502d217c370a9c53b852c96655721628b8142b44166b351

Observation 35820cca-a0df-4df9-86d7-65aa6630df4b · outbound

This paper cites The Llama 3 Herd of Models.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models The Llama 3 Herd of Models

Reference 39

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.040618Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.040618Z digest=sha256:3088e97121f13ef37138e93c5878dbf8ff6c3bf9bc2d838eea0cd00cc3103051

Observation ce7aefaa-5e78-4265-b5bd-050a1a5c4ea8 · outbound

This paper cites Joachimiak, J.H.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Joachimiak, J.H

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.453353Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.043304Z digest=sha256:9cbb2d2540ca8211c60c957ca1218b610b897bce024efe748584270e5c967ebd

Observation ba0a6b09-4613-4c80-a2cd-b48519d9a5af · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 41

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.444835Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.046136Z digest=sha256:674c421dd173cade0a4a5535fcbe5018e243baf82ffa84cf954e71733bcf509f

Observation 0931df51-f65d-4cd8-9e56-5ad9d1cd0d54 · outbound

This paper cites Tanaka, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Tanaka, M

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.436938Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.048674Z digest=sha256:0e2910cf7c3c5aa6834ad633d5ba158c993496a7eaf107efe39287410aec1c32

Observation 35ff1bc3-8b85-4f4a-ac53-a7d447bde5b3 · outbound

This paper cites Rambow, A.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Rambow, A

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.428694Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.051331Z digest=sha256:a3ecab0bfd668a5dd95284db769053d3091dde0480e66ea9f86a4e756eb274db

Observation 22811249-07fe-4e8d-9872-f9dd3d66c29a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 44

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.419872Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.054073Z digest=sha256:41e212cac82f500357f6e3b2f82ab6f4efd02941bffea5651cf31f41bd5774ff

Observation 258f1c36-e779-4390-b144-08a03704110b · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 45

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.411436Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.056939Z digest=sha256:a98563d7bf4944479d1842144a3eb8857fedd28c342609fdc7bc1513c05265b1

Observation 0d4ecf6a-e591-4937-8093-9ee57467a788 · outbound

This paper cites Griffiths, P.A.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Griffiths, P.A

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.402730Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.059408Z digest=sha256:a276a85696f1c5e4d78b5e507e41f27b1262e87e24c8836d519840c9c6cd7555

Observation 691a53c9-b460-4287-a73a-6ee7c936a5d9 · outbound

This paper cites Goenka, F.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Goenka, F

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.394575Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.062065Z digest=sha256:41dede3a973d0376d42ca733603ef95bc8d52d23bb52249de81af110e7951ab7

Observation fd01fca6-1912-4261-aa9d-212fa51103bd · outbound

This paper cites Böttcher, E.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Böttcher, E

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.386238Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.064738Z digest=sha256:239b5844c39867ed4729ca7ce8a5f921d6733ed92b9113fc4bb5f9ed708618a5

Observation ce76a784-9656-46ba-9dfa-9633b36a6ef7 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 49

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.377671Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.067480Z digest=sha256:2f28d9b73f994e15361d621ba84a156d50c6eb0b7fbaf49aafda7d598caa090b

Observation af874769-ca83-4cf0-9ec9-a397fa4b7794 · outbound

This paper cites Habara, Y.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Habara, Y

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.369136Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.070061Z digest=sha256:0f50bbba0f26c1f57e167afe030fb9a2f7e78914ae0dd91d4e56a17789036cf7

Observation e6fe6b3b-557b-4a05-a355-7597bd28c2dc · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 51

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.360185Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.072727Z digest=sha256:445b8350970ca2542b10e0b6f4c5a64abb81e925c3e205c564ff3863a5b898fd

Observation 67a83495-e653-41a2-8edc-b4929d89f19f · outbound

This paper cites McCulloch, G.R.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models McCulloch, G.R

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.351905Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.075462Z digest=sha256:958076d0def5e5f350766fbf88bf7a260ac28af05030a31bbb273c376b51677c

Observation a5649570-972e-4323-811d-37e2d2ef0f6d · outbound

This paper cites Jie, C.J.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Jie, C.J

Reference 53

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.342971Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.078372Z digest=sha256:2648fd97acfc1c2fd0cb88e2530f47a14f18b5a8d3d74a89bf530d53b1e67878

Observation 8af303b1-d9b3-4358-aa74-98bac4dbab9a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 54

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.334330Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.080960Z digest=sha256:ed54e11c4c9e179583742f0b8726779980b322762416c5eed2dfd9db196a683e

Observation 30701ab6-8787-4c9e-9def-faf516a603cd · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 55

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.325906Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.083659Z digest=sha256:e79cff28b8d544966397c97e186b5fa94806fbe28c193874340a98c425940077

Observation b51bdda8-6a9d-46af-beca-02ab6b2b5c53 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 56

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.317555Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.086097Z digest=sha256:2aa95d5e147f916d91de6a918e068f88367a10fd8f55114598583e497fc66e78

Observation e7d46aa5-caa6-4429-81e7-a570e59c475c · outbound

This paper cites Bradley, TNF‐mediated inflammatory disease.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Bradley, TNF‐mediated inflammatory disease

Reference 57

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.309097Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.088633Z digest=sha256:9e04a47f9421cf074c04dd6059a9074988687f3b08d6ca28e9af3b653723d7f2

Observation 3fea77cd-ac2b-4b3f-b09d-263bea05fb64 · outbound

This paper cites Beutler, A.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Beutler, A

Reference 58

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.300909Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.091304Z digest=sha256:b133c4d84f25f8c6409bf0148679e87887857250f1eaf6f42b999538c3ab8a96

Observation ab10fa17-0d83-404a-8c0f-07d8ac50ae88 · outbound

This paper cites Yamamoto, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Yamamoto, S

Reference 59

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.292399Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.093800Z digest=sha256:1c98ec6b4bcadc61684665382f095d8f06fa839e795f8b6941aa1d523313193f

Observation b217fde1-2f97-4278-9b02-2af1cd12b7cd · outbound

This paper cites Zhu, J.M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Zhu, J.M

Reference 60

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.283509Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.096361Z digest=sha256:929ade85e262c9ee6fb4b462f78b7e7f08e89c3617b589ba4c4d5b159c98d1af

Observation 6ac6efc7-a4c4-4e15-ba4b-bd613a18ffc4 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 61

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.275162Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.099177Z digest=sha256:3853d2da364dc0a6386768aeb88218916200f423e4dd213a0a38afa619b046d1

Observation 91e44ba3-babd-452d-bc9c-80e0e2f93787 · outbound

This paper cites Opportunities and Risks of LLMs for Scalable Deliberation with Polis.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Opportunities and Risks of LLMs for Scalable Deliberation with Polis

Reference 62

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.101720Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.101720Z digest=sha256:9e66560b39b93c439b63f8ba3d9a296e852305692a624311603eaaae14e0afd7

Observation a79480ba-4d89-40f6-a85a-0a73483c067c · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 63

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.266113Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.104544Z digest=sha256:6b81b9ea461a9f3f5cd93ca0a211527003e18529863d29411b7a25da8d7edcdf

Observation 3217b7ec-2ddc-49e0-af63-22ef3c766e88 · outbound

This paper cites Abbasi Yadkori, I.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Abbasi Yadkori, I

Reference 64

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.257623Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.107231Z digest=sha256:d05bca5138254083f93dd0b2c1d1c748fe29573d2b5de2fee414d26fbb1277bf

Observation 1630f15b-55d4-4c7d-ace8-a6cab24444e1 · outbound

This paper cites Azure OpenAI in Azure AI Foundry Models [Internet].

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Azure OpenAI in Azure AI Foundry Models [Internet]

Reference 65

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.248107Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.110138Z digest=sha256:d9a3f694fc41de5bc33a6caeaee26dabaa680172d989916be81d9a3113c40376

Observation f3f7c2f3-f749-4db7-890f-44083b0b83b0 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 66

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.238413Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.112804Z digest=sha256:7f1f466b5941f6c102f5a936eb4ba20c4498568424e85a3e54cc076a96dfdbc8

Observation e165d2a0-7d0c-47a7-a1ef-8132f5d1d04f · outbound

This paper cites Razin, E.S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Razin, E.S

Reference 67

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.229489Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.115368Z digest=sha256:fbd43befada2bae5254054a8508741c7540e940101fb1ade79bddfa1427bfd52

Observation ac829ed4-d2b2-45b1-bf61-441a594c6bdc · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 68

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.220529Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.118144Z digest=sha256:66b0ad7bdc34fc8a31bd562a05765e558a696117cb906370691a56d33ab47139

Observation 0851820e-c76a-4c1a-a440-e03f06afcae3 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 69

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.211658Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.120963Z digest=sha256:33a4b9a82cfa209eab1d03aaef5ab69ba84e3e7de1d06fc043a179e133fe43ac

Observation 8b6cbf0f-9f41-44d0-970c-af4e05444a45 · outbound

This paper cites **” indicates a significant improvement with p < 0.01, while “ *.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models **” indicates a significant improvement with p < 0.01, while “ *

Reference 70

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.202109Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:07.123692Z digest=sha256:e43b296b059e74f4e608bbb31550d336b8eacef1f0cb211b4b3ed9c02bcff29e

Pith citing papers

No inbound Pith citation observations are available.