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Paper Citation Record · LEDGER

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3

As of 8 August 2026, this Paper Citation Record lists 21 of 21 outbound references and 0 inbound Pith citation observations for arXiv:2507.02345.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.02345 v1

Coverage vector

measured 21 of 21 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T20:36:26.285059Z

measured 21 of 21 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-08T06:32:00.761636+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

21 of 21 outbound references displayed

  • verified exact1
  • verified fuzzy14
  • unresolved6
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 536b8449-ebd3-44a6-96ed-bf90a36eed37 · outbound

This paper cites Protein complex prediction with alphafold-multimer.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Protein complex prediction with alphafold-multimer

Reference 1

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:28.349804Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:24.423847Z digest=sha256:a3589585459d9e2146fd20cf2352a2c5b7505f10b66d6bd09a57600f450fc3c2

Observation 4588f6e4-3639-4aaa-80fc-e9a8c93e49e4 · outbound

This paper cites Accurate structure prediction of biomolecular interactions with alphafold 3.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Accurate structure prediction of biomolecular interactions with alphafold 3

Reference 2

Resolution
unresolved
no resolver link, observed 2026-08-06T20:36:24.514387Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T20:36:24.514387Z digest=sha256:38630a306d43d08d0d873b7e7d34f8afffab9f60cb18517ab2ad623a86138134

Observation 7d509825-fdb0-4d41-8e38-5e1884eb634b · outbound

This paper cites Precise Antigen-Antibody Structure Predictions Enhance Antibody Development with HelixFold-Multimer.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Precise Antigen-Antibody Structure Predictions Enhance Antibody Development with HelixFold-Multimer

Reference 3

Resolution
verified exact
local_arxiv, observed 2026-08-06T20:36:26.571478Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:24.604849Z digest=sha256:788e2789b29bc0ab3df960ddf48c6db826094089f7bfccfc6fd301f77f22326e

Observation 8a088606-7433-4b74-b361-16ee15b7e106 · outbound

This paper cites Technical Report of HelixFold3 for Biomolecular Structure Prediction.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Technical Report of HelixFold3 for Biomolecular Structure Prediction

Reference 4

Resolution
unresolved
no resolver link, observed 2026-08-06T20:36:24.699020Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T20:36:24.699020Z digest=sha256:90fa930e2212250936b261a5a44b323aca1d1c78a7f977308518bb79113f879d

Observation 0ad2ab4d-cd24-40d7-a23b-25b03d7ba141 · outbound

This paper cites Learning inverse folding from millions of predicted structures.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Learning inverse folding from millions of predicted structures

Reference 5

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:28.217912Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:24.803000Z digest=sha256:fe5b5a44a0b76b18b6a866997a46d61d27344382c56e4c5dbd0c10a94f40565e

Observation 3fd62260-7d23-453c-bcbe-d9d5cbbb7642 · outbound

This paper cites Robust deep learning–based protein sequence design using proteinmpnn.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Robust deep learning–based protein sequence design using proteinmpnn

Reference 6

Resolution
unresolved
no resolver link, observed 2026-08-06T20:36:24.896712Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T20:36:24.896712Z digest=sha256:c4faaf22200b477985e9342706766553fb004e810db7ca10bb1a1186f3c17d55

Observation c2ab23f6-61a0-4a8a-b957-c53d6ebaa94b · outbound

This paper cites The foldx web server: an online force field.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 The foldx web server: an online force field

Reference 7

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:28.092783Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:24.960176Z digest=sha256:c150373ea0c2cb2e1972355b2227d99c76cbe938e04a217e95af5c9a9b2948dc

Observation b6e642d3-dc24-4a2e-a146-5cd73b140a93 · outbound

This paper cites Prodigy: a web server for predicting the binding affinity of protein–protein complexes.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Prodigy: a web server for predicting the binding affinity of protein–protein complexes

Reference 8

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:27.978258Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:25.028802Z digest=sha256:a434f5825d694c01e14a5238645a5a8942a871d6f89d3003ff3118c202a83c77

Observation ea699978-4166-4b6e-ad64-3067cd361270 · outbound

This paper cites Protein data bank.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Protein data bank

Reference 9

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:27.864165Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:25.110840Z digest=sha256:e608c0bcb5244ef7663bb8ffa024bfde06621ee6469ba6b8a4a0e8948a4fd7d0

Observation 181671b4-e5d3-493d-b33d-a8408fed5fa6 · outbound

This paper cites Atomically accurate de novo design of antibodies with rfdiffusion.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Atomically accurate de novo design of antibodies with rfdiffusion

Reference 10

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:27.726422Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:25.194325Z digest=sha256:5b62387d76e7bb2c8f0dc833b82c4bc0e181ab553b001173d2a224f4b2699b92

Observation 44425426-d977-4311-896c-1e234ed31383 · outbound

This paper cites HelixFold-Multimer: Elevating Protein Complex Structure Prediction to New Heights.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 HelixFold-Multimer: Elevating Protein Complex Structure Prediction to New Heights

Reference 11

Resolution
unresolved
no resolver link, observed 2026-08-06T20:36:25.308088Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T20:36:25.308088Z digest=sha256:88823912763ba79649ceaa271d264b0a626f0070a7af9d639ca8b6d68d1cfcb3

Observation f95a846d-b485-4caa-969a-570f8dac71d4 · outbound

This paper cites Proteingym: Large-scale benchmarks for protein design and fitness prediction.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Proteingym: Large-scale benchmarks for protein design and fitness prediction

Reference 12

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:27.596755Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:25.412890Z digest=sha256:6a04913fca8d20a9022b16978edfb7e621c4b9a0fbcef7e350c99f79d77c0dac

Observation 9096cf01-494a-4b4e-8a2e-26917de18c37 · outbound

This paper cites Unsupervised evolution of protein and antibody complexes with a structure-informed language model.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Unsupervised evolution of protein and antibody complexes with a structure-informed language model

Reference 13

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:27.496702Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:25.500883Z digest=sha256:24b902b96c9ef43acd39a4e6f7b20ac798ce69144a78e979ca39f5b7caad9b0c

Observation 54a0b75c-0c0d-4b48-bf48-7c3986cb916f · outbound

This paper cites De novo design of high-affinity protein binders with AlphaProteo.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 De novo design of high-affinity protein binders with AlphaProteo

Reference 14

Resolution
unresolved
no resolver link, observed 2026-08-06T20:36:25.630159Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T20:36:25.630159Z digest=sha256:c138853f5726855c2647da497f9035ef78592674361bac527d482db2c6626d89

Observation 9b2feb47-95fd-4d2d-9519-076a484115f0 · outbound

This paper cites De novo design of protein structure and function with rfdiffusion.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 De novo design of protein structure and function with rfdiffusion

Reference 15

Resolution
unresolved
no resolver link, observed 2026-08-06T20:36:25.711344Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-06T20:36:25.711344Z digest=sha256:53ebe48a33ad3d2aea757f4a6ca46edb7c0c962f009b27be56c5c2ec505e50ff

Observation 65f2926c-6311-48f9-9709-50e7d2cf6828 · outbound

This paper cites Flex ddg: Rosetta ensemble-based estimation of changes in protein–protein binding affinity upon mutation.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Flex ddg: Rosetta ensemble-based estimation of changes in protein–protein binding affinity upon mutation

Reference 16

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:27.393015Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:25.816821Z digest=sha256:3277ff972ba91d61602e86b4f9ce1a6e46113b074d22985256a3cbd3e7377962

Observation e104b243-ab55-4aa7-8fcb-4950a1136c44 · outbound

This paper cites X-ray crystal structure localizes the mechanism of inhibition of an il-36r antagonist monoclonal antibody to interaction with ig1 and ig2 extra cellular domains.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 X-ray crystal structure localizes the mechanism of inhibition of an il-36r antagonist monoclonal antibody to interaction with ig1 and ig2 extra cellular domains

Reference 17

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:27.287222Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:25.902481Z digest=sha256:50444edd6290c6fa434c64e5c47e3ab1080d9beb9f3a7dbe93852fa09c37bef3

Observation 0028c583-85fe-409d-b080-d73400eaa470 · outbound

This paper cites The influenza hemagglutinin stem antibody cr9114: Evidence for a narrow evolutionary path towards universal protection.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 The influenza hemagglutinin stem antibody cr9114: Evidence for a narrow evolutionary path towards universal protection

Reference 18

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:27.170701Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:26.013430Z digest=sha256:cbd23ffbcd87bd3ca17967fa44d464aac5016b1b14e0699068fda2c601926468

Observation 7e39c00f-2110-40fc-a284-e927f20c4a33 · outbound

This paper cites Antibody recognition of a highly conserved influenza virus epitope.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Antibody recognition of a highly conserved influenza virus epitope

Reference 19

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:27.063209Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:26.106566Z digest=sha256:727ad19f25bd958de81746509f61504a8becef615afb380ca7296fbb9d0f81b0

Observation 32a936c9-1654-4988-9304-62158dc084fe · outbound

This paper cites Binding affinity landscapes constrain the evolution of broadly neutralizing anti-influenza antibodies.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Binding affinity landscapes constrain the evolution of broadly neutralizing anti-influenza antibodies

Reference 20

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:26.877968Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:26.213432Z digest=sha256:817e497e9e440fd9b8184285d12b23422c784afd2abca4da090dbd3a371b1209

Observation b3073653-2827-4b2c-af5b-a67863b13b41 · outbound

This paper cites Language models of protein sequences at the scale of evolution enable accurate structure prediction.

HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3 Language models of protein sequences at the scale of evolution enable accurate structure prediction

Reference 21

Resolution
verified fuzzy
raw_fallback, observed 2026-08-06T20:36:26.723587Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-06T20:36:26.285059Z digest=sha256:a6b69433670489a91c97ebac576c671720da490379493057550060b1c184f217

Pith citing papers

No inbound Pith citation observations are available.