Paper Citation Record · LEDGER

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1

As of 9 August 2026, this Paper Citation Record lists 38 of 38 outbound references and 0 inbound Pith citation observations for arXiv:2507.09251.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.09251 v3

Coverage vector

measured 38 of 38 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T18:05:07.013170Z

measured 38 of 38 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-09T06:31:02.800959+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

38 of 38 outbound references displayed

verified exact0
verified fuzzy35
unresolved1
parse uncertain0
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External citation measurements

No source-named external measurement is stored.

Outbound references

Observation baf2c4aa-ec29-4ec1-84d8-fc813a9c32fa · outbound

This paper cites nature596(7873), 583–589 (2021).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 nature596(7873), 583–589 (2021)

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:13.235116Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation a17f1ce6-98e0-4448-b7a4-242020dc7def · outbound

This paper cites biorxiv, 2021–10 (2021).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 biorxiv, 2021–10 (2021)

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:13.105338Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation e43507c7-f395-4bb8-8397-c88746e5a1a0 · outbound

This paper cites Nature, 1–3 (2024).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Nature, 1–3 (2024)

Reference 3

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:12.994929Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 1fbca028-1994-48cd-9841-80ac320abaa8 · outbound

This paper cites Science373(6557), 871–876 (2021).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Science373(6557), 871–876 (2021)

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:12.864798Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation ed0fc4fa-6b99-44dc-94e9-6b90c43e30df · outbound

This paper cites Science384(6693), 2528 (2024).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Science384(6693), 2528 (2024)

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:12.670800Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 9cfd7658-3630-4e88-bd0c-bf55cd955cf1 · outbound

This paper cites Science 379(6637), 1123–1130 (2023).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Science 379(6637), 1123–1130 (2023)

Reference 6

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:12.473588Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 22a4a85f-1ab2-47b8-955f-0377c7b4033b · outbound

This paper cites Nature Machine Intelligence5(10), 1087–1096 (2023).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Nature Machine Intelligence5(10), 1087–1096 (2023)

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:12.252397Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 26a241b3-8b33-488a-8726-b15452f17bec · outbound

This paper cites HelixFold-Multimer: Elevating Protein Complex Structure Prediction to New Heights.

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 HelixFold-Multimer: Elevating Protein Complex Structure Prediction to New Heights

Reference 8

Resolution: metadata mismatch; local_arxiv, observed 2026-08-06T18:05:07.342818Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 3e146e9a-368d-4243-81dd-6c9fc38fcc2e · outbound

This paper cites Technical Report of HelixFold3 for Biomolecular Structure Prediction.

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Technical Report of HelixFold3 for Biomolecular Structure Prediction

Reference 9

Resolution: metadata mismatch; local_arxiv, observed 2026-08-06T18:05:07.174464Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 0c8417eb-d883-46f9-bb6d-2430ff0ef55a · outbound

This paper cites Nature methods19(6), 679–682 (2022).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Nature methods19(6), 679–682 (2022)

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:12.104687Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 4bb4c405-b959-4b73-8f05-71893e80064b · outbound

This paper cites Science, 0018 (2025).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Science, 0018 (2025)

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:12.017712Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 056ab4df-777b-4e00-bc0a-e948a7864c60 · outbound

This paper cites Bioinformatics39(9), 573 (2023).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Bioinformatics39(9), 573 (2023)

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:11.888468Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 3c4d8046-66ac-4056-9a3b-1a0e50147bd7 · outbound

This paper cites Communications Biology8(1), 373 (2025).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Communications Biology8(1), 373 (2025)

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:11.776915Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation ae24eac8-7a52-4eec-bf5c-6394d5362533 · outbound

This paper cites PLOS Computational Biology18(8), 1010483 (2022).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 PLOS Computational Biology18(8), 1010483 (2022)

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:11.612757Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 7b664634-3d26-4654-bff4-792446b332c7 · outbound

This paper cites Protein Science33(1), 4865 (2024).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Protein Science33(1), 4865 (2024)

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:11.437150Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 2f2c4199-ef3c-41f1-951a-f3009b22d131 · outbound

This paper cites Research Square, 3 (2025).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Research Square, 3 (2025)

Reference 16

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:11.234556Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 6bd57d8b-2851-4c57-8c64-843f3ab84849 · outbound

This paper cites nature communications15(1), 2464 (2024) 27.

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 nature communications15(1), 2464 (2024) 27

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:11.066615Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation d1102c57-894a-43b2-a137-827317793fec · outbound

This paper cites Nature625(7996), 832–839 (2024).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Nature625(7996), 832–839 (2024)

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:10.896539Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation c72cdad0-4791-4675-83b4-e3b3ca93482a · outbound

This paper cites Nature Communications 15(1), 7328 (2024).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Nature Communications 15(1), 7328 (2024)

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:10.709345Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 73c85f93-c821-453a-bca5-827ea694e92c · outbound

This paper cites Protein crystallography: methods and protocols, 627–641 (2017).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Protein crystallography: methods and protocols, 627–641 (2017)

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:10.538445Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 3b7eb255-3da9-4c4c-b4f8-cee4b12d6114 · outbound

This paper cites Nature biotechnology35(11), 1026–1028 (2017).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Nature biotechnology35(11), 1026–1028 (2017)

Reference 21

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:10.365141Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 36fb6d05-6669-4e46-bc47-846f4ffedd40 · outbound

This paper cites BioRxiv, 2025–06 (2025).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 BioRxiv, 2025–06 (2025)

Reference 22

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:10.165868Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation c7eaee93-2f7b-434e-a8fe-128e6346a589 · outbound

This paper cites BioRxiv, 2025–01 (2025).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 BioRxiv, 2025–01 (2025)

Reference 23

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:10.010011Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 74e186d7-a461-44d1-9711-cf1b246a924c · outbound

This paper cites BioRxiv, 2024–10 (2024).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 BioRxiv, 2024–10 (2024)

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:09.811764Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation fbf7831f-6569-4249-8f2f-f710c58139c2 · outbound

This paper cites The Protein Journal27(1), 59–70 (2008).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 The Protein Journal27(1), 59–70 (2008)

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:09.681189Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation d65ec39d-69dc-494b-82fc-7cd6ac5de7de · outbound

This paper cites Journal of The Royal Society Interface10(79), 20120835 (2013).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Journal of The Royal Society Interface10(79), 20120835 (2013)

Reference 26

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:09.506602Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 239abefc-bb83-422d-8781-74f805ae714b · outbound

This paper cites Chemical Reviews118(4), 1691–1741 (2018).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Chemical Reviews118(4), 1691–1741 (2018)

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:09.307858Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 3c60a73c-68d9-4b22-8c9e-f6b96377add3 · outbound

This paper cites Beilstein Journal of Organic Chemistry17, 1–10 (2021).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Beilstein Journal of Organic Chemistry17, 1–10 (2021)

Reference 28

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:09.130614Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 45595dfb-5715-43b2-91a5-69aa4afd5e2f · outbound

This paper cites Angewandte Chemie136(34), 202405823 (2024).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Angewandte Chemie136(34), 202405823 (2024)

Reference 29

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:08.923354Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 53c67fd4-b42c-488e-b77f-24e5ae84574a · outbound

This paper cites Nature structural & molecular biology30(8), 1172–1182 (2023).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Nature structural & molecular biology30(8), 1172–1182 (2023)

Reference 30

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:08.719325Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation dfe822b0-5df1-4dae-8827-1f4e3527c972 · outbound

This paper cites Adam: A Method for Stochastic Optimization.

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Adam: A Method for Stochastic Optimization

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-06T18:05:06.492835Z

Source-reported events for the cited work

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Observation 61e9cd8e-9692-490d-b95c-88e26f007136 · outbound

This paper cites Nucleic Acids Research50, 1368–1372.

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Nucleic Acids Research50, 1368–1372

Reference 32

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:08.583604Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation ff01a500-0c32-4bbf-b5da-ff38309b3ec0 · outbound

This paper cites Nucleic Acids Research28(1), 235–242 (2000).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Nucleic Acids Research28(1), 235–242 (2000)

Reference 33

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:08.379767Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 8051857a-c795-42f6-9be8-f49d74f34376 · outbound

This paper cites PLOS ONE11(8), 1–9 (2016).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 PLOS ONE11(8), 1–9 (2016)

Reference 34

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:08.185238Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 2bf4be09-6a7a-432f-8845-8683e0614102 · outbound

This paper cites Bioinformatics29(21), 2722–2728 (2013) 28.

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Bioinformatics29(21), 2722–2728 (2013) 28

Reference 35

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:08.031712Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation bfa04779-5d62-4f27-b6dc-05936f04b5b1 · outbound

This paper cites http://www.rdkit.org.

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 http://www.rdkit.org

Reference 36

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:07.860958Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 646900a7-f395-45e2-a8e6-59d31d9b69ba · outbound

This paper cites Bioinformatics 32(2), 298–300 (2015).

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 Bioinformatics 32(2), 298–300 (2015)

Reference 37

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:07.683755Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Observation 03d846ac-76b9-4808-84ae-e251938d9e00 · outbound

This paper cites BMC Bioinformatics17(1), 81 (2016) 29.

Reshaping Biomolecular Structure Prediction through Strategic Conformational Exploration with HelixFold-S1 BMC Bioinformatics17(1), 81 (2016) 29

Reference 38

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T18:05:07.525559Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

Pith citing papers

No inbound Pith citation observations are available.