Paper Citation Record · LEDGER

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling

As of 8 August 2026, this Paper Citation Record lists 16 of 16 outbound references and 0 inbound Pith citation observations for arXiv:2507.15087.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.15087 v1

Coverage vector

measured 16 of 16 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T15:47:06.344749Z

measured 16 of 16 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-08T06:32:00.761636+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

16 of 16 outbound references displayed

verified exact1
verified fuzzy1
unresolved14
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 13999926-73b1-497c-9311-ccb9a1a93b62 · outbound

This paper cites Caduceus: Bi-Directional Equivariant Long-Range DNA Sequence Modeling.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Caduceus: Bi-Directional Equivariant Long-Range DNA Sequence Modeling

Reference 9

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.217632Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 9fab3117-1a44-415f-a165-f4b1ef0fd7ca · outbound

This paper cites an unresolved cited work.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Unresolved cited work

Reference 11

Resolution: unresolved; raw_fallback, observed 2026-08-06T15:47:06.773918Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation a05c3812-a629-40f2-a409-0efa37451196 · outbound

This paper cites LLaMA: Open and Efficient Foundation Language Models.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling LLaMA: Open and Efficient Foundation Language Models

Reference 12

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.246737Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 537af739-9755-44e5-9b7b-5ec5ecb97fce · outbound

This paper cites DNAGPT: A Generalized Pre-trained Tool for Versatile DNA Sequence Analysis Tasks.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling DNAGPT: A Generalized Pre-trained Tool for Versatile DNA Sequence Analysis Tasks

Reference 15

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.314400Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e57d1b98-62c7-4c44-a167-3ad53b97a885 · outbound

This paper cites Neural Machine Translation of Rare Words with Subword Units.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Neural Machine Translation of Rare Words with Subword Units

Reference 2002

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.222924Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation af8530ab-3780-48e6-ade3-aa85ef3ccba9 · outbound

This paper cites an unresolved cited work.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Unresolved cited work

Reference 2014

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.263928Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation bb3b5c4d-0897-4e4f-a23c-b0455a1cef72 · outbound

This paper cites DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genome.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genome

Reference 2015

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.344749Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 43c54bb7-7db1-4f0c-a222-a9ae608f2c8b · outbound

This paper cites Reformer: The Efficient Transformer.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Reformer: The Efficient Transformer

Reference 2016

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.198796Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation acef5fb4-5878-4aa7-96a1-4dabd98ceb0f · outbound

This paper cites DNAZEN: Enhanced Gene Sequence Representations via Mixed Granularities of Coding Units.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling DNAZEN: Enhanced Gene Sequence Representations via Mixed Granularities of Coding Units

Reference 2017

Resolution: verified exact; local_arxiv, observed 2026-08-06T15:47:06.647647Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation b1b1368b-749f-42df-95d1-3e860f4c49f5 · outbound

This paper cites DeBERTa: Decoding-enhanced BERT with Disentangled Attention.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling DeBERTa: Decoding-enhanced BERT with Disentangled Attention

Reference 2019

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.195190Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 2e35a413-8c7f-4a72-9909-39e69639a695 · outbound

This paper cites an unresolved cited work.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Unresolved cited work

Reference 2020

Resolution: unresolved; raw_fallback, observed 2026-08-06T15:47:06.783486Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation cc137ac1-815c-406d-9d7c-e00716a1d4d4 · outbound

This paper cites Decoupled Weight Decay Regularization.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Decoupled Weight Decay Regularization

Reference 2021

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.206836Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 2fc6c41f-92ba-4d7d-85b4-37e674a22063 · outbound

This paper cites Train Short, Test Long: Attention with Linear Biases Enables Input Length Extrapolation.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Train Short, Test Long: Attention with Linear Biases Enables Input Length Extrapolation

Reference 2022

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.213917Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 0457d81c-9ad3-47a4-a0b2-81551b446dbb · outbound

This paper cites Transformer-XL: Attentive Language Models Beyond a Fixed-Length Context.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Transformer-XL: Attentive Language Models Beyond a Fixed-Length Context

Reference 2023

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.187126Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e4c59aea-1f93-4a2f-ae5e-8e66aeed29ec · outbound

This paper cites Devlin, M.-W.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Devlin, M.-W

Reference 2024

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T15:47:06.793988Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation ab8c0842-3550-47a3-9a9b-8207df9fa922 · outbound

This paper cites Qwen3 Technical Report.

Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling Qwen3 Technical Report

Reference 2025

Resolution: unresolved; no resolver link, observed 2026-08-06T15:47:06.284843Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Pith citing papers

No inbound Pith citation observations are available.