Paper Citation Record · LEDGER

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models

As of 6 August 2026, this Paper Citation Record lists 19 of 19 outbound references and 0 inbound Pith citation observations for arXiv:2507.21980.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.21980 v1

Coverage vector

measured 19 of 19 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T12:14:33.797544Z

measured 19 of 19 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-06T06:34:29.942622+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

19 of 19 outbound references displayed

verified exact2
verified fuzzy9
unresolved7
parse uncertain0
malformed identifier0
metadata mismatch1

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation d3300f1e-0ae0-4ce3-8782-fd4781bf4881 · outbound

This paper cites Claude 3.7 sonnet and claude code.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models Claude 3.7 sonnet and claude code

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T12:14:35.081451Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation e9a26543-7b6b-4528-b287-17ae888006ce · outbound

This paper cites and Ackerman, G.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models and Ackerman, G

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T12:14:35.071300Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation dd6a89ba-d8aa-4ba8-8e68-39145a9f7f0c · outbound

This paper cites an unresolved cited work.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models Unresolved cited work

Reference 3

Resolution: unresolved; raw_fallback, observed 2026-08-06T12:14:35.061540Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation 265f8bfb-eab6-406f-9ab9-77af927e8fb3 · outbound

This paper cites S., Brady, A.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models S., Brady, A

Reference 4

Resolution: verified exact; doi, observed 2026-08-06T12:14:33.964644Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation 7bc5a208-9e74-48c5-854f-06f6cbe1c5bf · outbound

This paper cites Detection of the diadema antillarum scuticociliatosis philaster clade on sympatric metazoa, plankton, and abiotic surfaces and assessment for its potential reemergence.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models Detection of the *diadema antillarum* scuticociliatosis *philaster* clade on sympatric metazoa, plankton, and abiotic surfaces and assessment for its potential reemergence

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T12:14:35.051439Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation 1c99edfc-1c58-4eff-b1ac-a7a21f3b957e · outbound

This paper cites M., Crielaard, W., and Brandt, B.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models M., Crielaard, W., and Brandt, B

Reference 6

Resolution: metadata mismatch; raw_fallback, observed 2026-08-06T12:14:34.149715Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation 9084aed6-aa5e-4c2f-8091-c66a732bfabc · outbound

This paper cites K., and Knight, R.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models K., and Knight, R

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T12:14:35.039650Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation 5a9246e9-cd92-4976-b82b-e66ae90af420 · outbound

This paper cites The llama 4 herd: The beginning of a new era of natively multimodal ai innovation.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models The llama 4 herd: The beginning of a new era of natively multimodal ai innovation

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T12:14:35.026266Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation 10124054-e5c7-4660-8aba-2eb2b03b8788 · outbound

This paper cites T., Douglas, G.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models T., Douglas, G

Reference 9

Resolution: unresolved; no resolver link, observed 2026-08-06T12:14:32.965149Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e6acb8b5-4b7d-4f49-ba31-aafb7ba40d32 · outbound

This paper cites GPT-4 Technical Report.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models GPT-4 Technical Report

Reference 10

Resolution: unresolved; no resolver link, observed 2026-08-06T12:14:33.097445Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation c8586d3b-13df-45d7-8c3e-1cae66e80b47 · outbound

This paper cites T., Malik, F., Waldron, L., and Segata, N.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models T., Malik, F., Waldron, L., and Segata, N

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T12:14:35.012032Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation c515f475-2f1f-4964-864a-61e54bfa0a3b · outbound

This paper cites S., Wei, J., Chung, H.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models S., Wei, J., Chung, H

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T12:14:34.900591Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation e1c22673-9bd7-40ee-9326-09fe055c2b2d · outbound

This paper cites Recreational water quality criteria, 2012.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models Recreational water quality criteria, 2012

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T12:14:34.766403Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation 286a258c-1866-43bb-bd5f-c92fcce44ede · outbound

This paper cites an unresolved cited work.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models Unresolved cited work

Reference 14

Resolution: unresolved; raw_fallback, observed 2026-08-06T12:14:34.656089Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation 3f7f0cf1-5573-4a7d-81ad-3089a6b0b45b · outbound

This paper cites L., Berrios, D.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models L., Berrios, D

Reference 15

Resolution: verified exact; doi, observed 2026-08-06T12:14:34.472963Z

Source-reported events for the cited work

correction dated 2021-05-10. Source: crossref record 10.1128/msystems.00273-21->10.1128/msystems.01194-20:correction, observed 2026-07-11T03:07:46.552847+00:00. This notice travels one citation hop only.

Observation b122bb41-0616-4e80-9a82-7a55b74f08ac · outbound

This paper cites Z., Peddada, S.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models Z., Peddada, S

Reference 16

Resolution: unresolved; no resolver link, observed 2026-08-06T12:14:33.566061Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation c1a73947-0eb3-4dbf-898b-5feca84b947e · outbound

This paper cites Grok 3 Beta --- The Age of Reasoning Agents.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models Grok 3 Beta --- The Age of Reasoning Agents

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T12:14:34.334144Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-06T06:34:29.942622+00:00.

Observation 4a989e31-2e08-48a6-8442-b128cacb348d · outbound

This paper cites D., Ren, H., Huang, J., Chen, C., Zhou, Y., Fu, S., Liu, W., Liu, T., Li, X., Chen, Y., He, L., Zou, J., Li, Q., Liu, H., and Sun, L.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models D., Ren, H., Huang, J., Chen, C., Zhou, Y., Fu, S., Liu, W., Liu, T., Li, X., Chen, Y., He, L., Zou, J., Li, Q., Liu, H., and Sun, L

Reference 18

Resolution: unresolved; no resolver link, observed 2026-08-06T12:14:33.727733Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 599242fa-ccd9-4003-b93b-ae26957483fe · outbound

This paper cites write newline.

Predicting Microbial Ontology and Pathogen Risk from Environmental Metadata with Large Language Models write newline

Reference 19

Resolution: unresolved; no resolver link, observed 2026-08-06T12:14:33.797544Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Pith citing papers

No inbound Pith citation observations are available.