Paper Citation Record · LEDGER

LCPan: efficient variation graph construction using Locally Consistent Parsing

As of 15 August 2026, this Paper Citation Record lists 52 of 52 outbound references and 0 inbound Pith citation observations for arXiv:2511.12205.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2511.12205 v4

Coverage vector

measured 52 of 52 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-03T22:06:58.147959Z

measured 52 of 52 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-15T06:32:42.880941+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

52 of 52 outbound references displayed

verified exact0
verified fuzzy0
unresolved52
parse uncertain0
malformed identifier0
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External citation measurements

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Outbound references

Observation 45a960ae-fd57-41a5-801f-6ced9484fc4d · outbound

This paper cites M.et al.Building and improving reference genome assemblies.Proceedings of the IEEE105, 422–435 (2017).

LCPan: efficient variation graph construction using Locally Consistent Parsing M.et al.Building and improving reference genome assemblies.Proceedings of the IEEE105, 422–435 (2017)

Reference 1

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.231797Z

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Observation 0400b600-1971-4d03-9470-72244dafebaf · outbound

This paper cites Computational pan-genomics: status, promises and challenges.Brief- ings in Bioinformatics19, 118–135 (2018).

LCPan: efficient variation graph construction using Locally Consistent Parsing Computational pan-genomics: status, promises and challenges.Brief- ings in Bioinformatics19, 118–135 (2018)

Reference 2

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.321367Z

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Observation 9a99a8dc-da98-4faf-9318-f746f0c5fca1 · outbound

This paper cites & Telford, M.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Telford, M

Reference 3

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.410925Z

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Observation 5e494add-8f07-495d-ac68-01f2420fcc48 · outbound

This paper cites & Bhatt, A.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Bhatt, A

Reference 4

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.497462Z

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Observation 7e1f17eb-f35b-4163-a529-8daa392a786e · outbound

This paper cites D.et al.Mash: fast genome and metagenome distance estimation using MinHash.Genome Biology 17, 132 (2016).

LCPan: efficient variation graph construction using Locally Consistent Parsing D.et al.Mash: fast genome and metagenome distance estimation using MinHash.Genome Biology 17, 132 (2016)

Reference 5

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.575087Z

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Observation 2cd0e9be-9235-4759-9c6f-171262de086e · outbound

This paper cites Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM.

LCPan: efficient variation graph construction using Locally Consistent Parsing Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM

Reference 6

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.630484Z

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Observation b871ee33-1316-41d2-ae8e-e528d369c5ef · outbound

This paper cites & Kidd, J.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Kidd, J

Reference 7

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.688880Z

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Observation 88912524-1218-420c-b3d2-4e170e3b13cf · outbound

This paper cites & Kingsford, C.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Kingsford, C

Reference 8

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.717766Z

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Observation 937fce83-8d43-4758-9e23-95a0493e348b · outbound

This paper cites & Wheeler, D.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Wheeler, D

Reference 9

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.770678Z

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Observation 78e44cb8-5cb4-461a-a66d-3e10ff35b537 · outbound

This paper cites & Manzini, G.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Manzini, G

Reference 10

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.811833Z

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Observation 89f6eeba-dbc3-4b1f-873f-794178ec03d8 · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 11

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.827184Z

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Observation 86e63136-9f1a-43a9-af78-1543855c48ae · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 12

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.854153Z

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Observation 1cf82c2e-9c9d-451f-ac16-8d31363a812b · outbound

This paper cites R., Mount, S.

LCPan: efficient variation graph construction using Locally Consistent Parsing R., Mount, S

Reference 13

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.861981Z

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Observation e154cd87-9850-45f2-8a9d-ae914dac7086 · outbound

This paper cites & Mar¸ cais, G.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Mar¸ cais, G

Reference 14

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.895034Z

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Observation 28e7fd93-6710-41da-b6df-c4065db8b73a · outbound

This paper cites & Chikhi, R.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Chikhi, R

Reference 15

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.928067Z

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Observation a42557c0-9db5-451e-a1d6-b346ea4cdd1c · outbound

This paper cites Minimap2: pairwise alignment for nucleotide sequences.Bioinformatics34, 3094–3100 (2018).

LCPan: efficient variation graph construction using Locally Consistent Parsing Minimap2: pairwise alignment for nucleotide sequences.Bioinformatics34, 3094–3100 (2018)

Reference 16

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.966056Z

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Observation 533ce439-1754-497e-a287-466b484a0569 · outbound

This paper cites & Kingsford, C.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Kingsford, C

Reference 17

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:55.984127Z

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Observation d4fe9fbd-84a3-46ba-8d6e-876fb13b8dbc · outbound

This paper cites & Orenstein, Y.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Orenstein, Y

Reference 18

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.022317Z

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Observation e787a69c-663a-4e13-9a92-b88201b81b1c · outbound

This paper cites Effective sequence similarity detection with strobemers.Genome research31, 2080–2094 (2021).

LCPan: efficient variation graph construction using Locally Consistent Parsing Effective sequence similarity detection with strobemers.Genome research31, 2080–2094 (2021)

Reference 19

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.056233Z

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Observation 6da361ed-63a6-4559-80a5-c161924d172d · outbound

This paper cites Syncmers are more sensitive than minimizers for selecting conserved k -mers in biological sequences.

LCPan: efficient variation graph construction using Locally Consistent Parsing Syncmers are more sensitive than minimizers for selecting conserved k -mers in biological sequences

Reference 20

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.068187Z

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Observation 4d43ab16-066c-4a56-968d-a322a74dc562 · outbound

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LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 21

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.102891Z

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Observation c61cc13a-fd44-439d-a4c2-5f68c8291096 · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 22

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.136625Z

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Observation 9e020117-7385-420f-821b-6a151bfc0eb1 · outbound

This paper cites & Vishkin, U.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Vishkin, U

Reference 23

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.175634Z

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Observation 4609c68b-0a2f-4643-90b5-bd29d447cab2 · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 24

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.208617Z

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Observation 8664d771-6eaf-4232-b026-0909c91da75b · outbound

This paper cites & Sahinalp, C.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Sahinalp, C

Reference 25

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.229611Z

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Observation 0fddb8a0-6117-44e5-b68d-5b83cd0c7162 · outbound

This paper cites & Sahinalp, S.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Sahinalp, S

Reference 26

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.263647Z

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Observation 59a0b4c9-9e95-4802-98bd-145d9998ff08 · outbound

This paper cites Efficient terabyte-scale text compression via stable local consistency and parallel grammar processing.

LCPan: efficient variation graph construction using Locally Consistent Parsing Efficient terabyte-scale text compression via stable local consistency and parallel grammar processing

Reference 27

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.270152Z

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Observation af7798af-37d9-40a3-b508-6121cb2d0817 · outbound

This paper cites & Sahinalp, S.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Sahinalp, S

Reference 28

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.336181Z

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Observation 2c9861a8-5b63-4c9d-a44a-0c3d5a9c494d · outbound

This paper cites & Porat, E.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Porat, E

Reference 29

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.374015Z

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Observation 8aed6196-dea8-4683-b11c-647014db4fa5 · outbound

This paper cites & Pacheco, A.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Pacheco, A

Reference 30

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.478083Z

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Observation cc053c37-9af9-4c72-8cd9-ffd71e0aae88 · outbound

This paper cites & Marschall, T.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Marschall, T

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.538935Z

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Observation edb74a27-72cb-4cda-a2ee-1bbd6409442e · outbound

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LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 32

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.625182Z

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Observation 3459f34b-2a61-46f6-b332-66f74eb04b4b · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 33

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.685164Z

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Observation 93879d6b-7819-4a25-bbc0-22b126b4ec11 · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 34

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.824451Z

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Observation a1275277-4dc5-41d6-b309-1dcf7bc3458b · outbound

This paper cites & Limasset, A.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Limasset, A

Reference 35

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.878544Z

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Observation 9f5a75b4-b669-434a-865d-579f59fc7c57 · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 36

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:56.961167Z

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Observation 9f53184b-48a0-40bd-aa7a-a36925772eb5 · outbound

This paper cites K.et al.The 100-genomes strains, anS.

LCPan: efficient variation graph construction using Locally Consistent Parsing K.et al.The 100-genomes strains, anS

Reference 37

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.041852Z

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Observation 31b2718e-14d5-4d47-8a5d-5529ea7cd8fc · outbound

This paper cites & Kingsford, C.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Kingsford, C

Reference 38

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.128700Z

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Observation 85b28c3c-0b2c-4842-af1b-74dec71b798b · outbound

This paper cites GNU Parallel - the command-line power tool.;login: The USENIX Magazine36, 42–47 (2011).

LCPan: efficient variation graph construction using Locally Consistent Parsing GNU Parallel - the command-line power tool.;login: The USENIX Magazine36, 42–47 (2011)

Reference 39

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Observation 72753045-4540-49d1-94a8-1a45ccbfe4a7 · outbound

This paper cites F.et al.A complete diploid human genome benchmark for personalized genomics.bioRxiv(2025).

LCPan: efficient variation graph construction using Locally Consistent Parsing F.et al.A complete diploid human genome benchmark for personalized genomics.bioRxiv(2025)

Reference 40

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.276849Z

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Observation 7f7a8760-815d-4ea7-81bc-25594c3a94a1 · outbound

This paper cites & Tomescu, A.

LCPan: efficient variation graph construction using Locally Consistent Parsing & Tomescu, A

Reference 41

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.347191Z

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Observation 435d590a-9f15-4a10-91e9-aaddb21e3203 · outbound

This paper cites M.et al.A robust benchmark for detection of germline large deletions and insertions.Nature Biotech- nology38, 1347–1355 (2020).

LCPan: efficient variation graph construction using Locally Consistent Parsing M.et al.A robust benchmark for detection of germline large deletions and insertions.Nature Biotech- nology38, 1347–1355 (2020)

Reference 42

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.420402Z

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Observation 11576f41-f9dd-4365-b250-7d6576ae2407 · outbound

This paper cites pbsv: PacBio structural variant SV calling and analysis tools (2025).

LCPan: efficient variation graph construction using Locally Consistent Parsing pbsv: PacBio structural variant SV calling and analysis tools (2025)

Reference 43

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.498792Z

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Observation 87bacc66-f7d9-4b29-a5b3-738f65a1d5fd · outbound

This paper cites Murmurhash (2008).

LCPan: efficient variation graph construction using Locally Consistent Parsing Murmurhash (2008)

Reference 44

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.575847Z

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Observation 448894d5-0819-4c5b-a756-d25c8607c7b3 · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 45

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.652004Z

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Observation 9e43dbb9-8c61-44e4-95b7-6cc600f16221 · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 46

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.697627Z

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Observation 872a5779-85b5-4be4-a9fe-1ae7db775f59 · outbound

This paper cites The RINT substringxyzcan also be followed by an LMAX core wherezlmorlmnmay satisfy the LMAX rule (y < z < l andl > m; ory < z < l < mandm > n).

LCPan: efficient variation graph construction using Locally Consistent Parsing The RINT substringxyzcan also be followed by an LMAX core wherezlmorlmnmay satisfy the LMAX rule (y < z < l andl > m; ory < z < l < mandm > n)

Reference 47

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.769790Z

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Observation 68b5eaf5-fd40-421e-b24c-443be3f3a350 · outbound

This paper cites ⊓ ⊔ We showed in Lemma 1 that a string can be fully represented without gaps using cores.

LCPan: efficient variation graph construction using Locally Consistent Parsing ⊓ ⊔ We showed in Lemma 1 that a string can be fully represented without gaps using cores

Reference 48

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.844161Z

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Observation ab5275ce-70af-486f-9cb1-8c11ae5984c3 · outbound

This paper cites By definition, no local minimum can exist adjacent to an LMAX core.

LCPan: efficient variation graph construction using Locally Consistent Parsing By definition, no local minimum can exist adjacent to an LMAX core

Reference 49

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.911875Z

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Observation fac8c755-79ab-4eb5-ba3c-e20355c41fef · outbound

This paper cites The closest RINT core could start atyifz=l, but in that case, no other core may start atzfor the same reason outlined above.

LCPan: efficient variation graph construction using Locally Consistent Parsing The closest RINT core could start atyifz=l, but in that case, no other core may start atzfor the same reason outlined above

Reference 50

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:57.972545Z

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Observation 95de12b4-53cf-4339-be04-952fdfa6edc8 · outbound

This paper cites For example, ifw=xyyznm, thenxyyzis a RINT core, and the next LMIN, LMAX, or SSEQ core may start atyzn.

LCPan: efficient variation graph construction using Locally Consistent Parsing For example, ifw=xyyznm, thenxyyzis a RINT core, and the next LMIN, LMAX, or SSEQ core may start atyzn

Reference 51

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:58.081876Z

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Observation 88f01e8e-5695-4e96-a2db-218a20e4fa5e · outbound

This paper cites an unresolved cited work.

LCPan: efficient variation graph construction using Locally Consistent Parsing Unresolved cited work

Reference 52

Resolution: unresolved; no resolver link, observed 2026-08-03T22:06:58.147959Z

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Pith citing papers

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