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Paper Citation Record · LEDGER

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA)

As of 22 August 2026, this Paper Citation Record lists 73 of 73 outbound references and 0 inbound Pith citation observations for arXiv:2606.01611.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2606.01611 v1

Coverage vector

measured 73 of 73 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-06-28T12:01:21.569134Z

measured 73 of 73 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-22T06:32:14.747728+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

73 of 73 outbound references displayed

  • verified exact2
  • verified fuzzy0
  • unresolved71
  • parse uncertain0
  • malformed identifier0
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External citation measurements

No source-named external measurement is stored.

Outbound references

Observation ffaa51bc-3a7d-4b03-978b-abd9c99f37d5 · outbound

This paper cites Are there pathways for protein folding?Journal de Chimie Physique, 65:44–45, 1968.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Are there pathways for protein folding?Journal de Chimie Physique, 65:44–45, 1968

Reference 1

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Unavailable: canonical work link unavailable.

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Observation 9a16d34b-de2a-49bf-b9ff-bb2c611180fa · outbound

This paper cites How to fold graciously.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) How to fold graciously

Reference 2

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:5e4d8cbe066c4e770238c76e03531f637e011476742174b63c6c46c669d3e8a1

Observation 784ed790-5c96-4f39-8717-bf859443e571 · outbound

This paper cites The levinthal paradox: yesterday and today.Folding and Design, 2(4):S69–S75, 1997.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) The levinthal paradox: yesterday and today.Folding and Design, 2(4):S69–S75, 1997

Reference 3

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:4bc1c210eac391f4dca0a3d5de6900f9e681968501b524eef24559bfa0864ecd

Observation 333efd97-740b-420b-93b0-4f5ab847e44d · outbound

This paper cites Ivankov and Alexei V.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Ivankov and Alexei V

Reference 4

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:02fd8776b87159655ec0598627729381585f414bfd8c98dd5a67ca6e45f9e1d8

Observation 5e9b4d62-82c2-4f50-861d-8f7f2fd73667 · outbound

This paper cites Highly accurate protein structure prediction with alphafold.Nature, 596(7873):583–589, 2021.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Highly accurate protein structure prediction with alphafold.Nature, 596(7873):583–589, 2021

Reference 5

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no resolver link, observed 2026-06-28T12:01:21.569134Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:ebe37d989a29c8e9d06cd8503452ea4dffcd99822887d32c3c5e17a73edcf3a1

Observation 94619fe7-2f2e-4322-b1cc-e3cb8de71a8f · outbound

This paper cites Burley, Dennis W.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Burley, Dennis W

Reference 6

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no resolver link, observed 2026-06-28T12:01:21.569134Z

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Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:0a661feaf5b321decb29b3c93c26d11e4af44631c965ad73cb1309080bcf4c37

Observation 865b1510-71f3-4dbd-8d1c-8f9e65221d06 · outbound

This paper cites Pdb reaches a new milestone.https://www.ebi.ac.uk/ pdbe/news/pdb-reaches-new-milestone, 2026.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Pdb reaches a new milestone.https://www.ebi.ac.uk/ pdbe/news/pdb-reaches-new-milestone, 2026

Reference 7

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no resolver link, observed 2026-06-28T12:01:21.569134Z

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:49558081aa26be79fa5b07cd16f2d4361bed9b0cc04c39667e6205eb385c5d45

Observation 9bae0e95-0d34-419e-acc7-1250f9f57315 · outbound

This paper cites Satpdb: a database of structurally annotated therapeutic peptides.Nucleic Acids Research, 44(D1):D1119–D1126, 2016.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Satpdb: a database of structurally annotated therapeutic peptides.Nucleic Acids Research, 44(D1):D1119–D1126, 2016

Reference 8

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no resolver link, observed 2026-06-28T12:01:21.569134Z

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:b62510004f0cb867c1406f875d46aec75b166ca5d68cb9f9d16aced64440009c

Observation 9699db39-02ce-4fa1-b156-6146740e844d · outbound

This paper cites Apd3: the antimicrobial peptide database as a tool for research and education.Nucleic Acids Research, 44(D1):D1087–D1093, 2016.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Apd3: the antimicrobial peptide database as a tool for research and education.Nucleic Acids Research, 44(D1):D1087–D1093, 2016

Reference 9

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no resolver link, observed 2026-06-28T12:01:21.569134Z

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:b3f3c3e7526ca53d9a8329da9f5647c522d29a379d94a79a2641a1321d333cce

Observation 315bca19-69ab-47fe-8764-06dfaabdda84 · outbound

This paper cites Neuropep: a comprehensive resource of neuropeptides.Database, 2015:bav038, 2015.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Neuropep: a comprehensive resource of neuropeptides.Database, 2015:bav038, 2015

Reference 10

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no resolver link, observed 2026-06-28T12:01:21.569134Z

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:29693d8cb549b08ba9d0e9c756213cfef77793d5c6f2380e00a7be47ea070ba7

Observation 1f8d7459-2164-49f2-bb6e-b8905c131601 · outbound

This paper cites Qupepfold: A python package for hybrid quantum-classical protein folding simulations with cvar-optimized vqe.PLOS ONE, 21:1–20, 02 2026.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Qupepfold: A python package for hybrid quantum-classical protein folding simulations with cvar-optimized vqe.PLOS ONE, 21:1–20, 02 2026

Reference 11

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no resolver link, observed 2026-06-28T12:01:21.569134Z

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:b670b08ccb7933b929d450161539f82bfda8acb940e83778640f095604643982

Observation 93f370fd-b8ac-4f5d-8b59-96b5cf3a2805 · outbound

This paper cites Peptide conformational sampling using the quantum approximate optimization algorithm.npj Quantum Information, 9:1–12, 2023.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Peptide conformational sampling using the quantum approximate optimization algorithm.npj Quantum Information, 9:1–12, 2023

Reference 12

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no resolver link, observed 2026-06-28T12:01:21.569134Z

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Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:1d0868e4cf43ba0b6f3c5fc6bd3de7e0b054828257b0d5bba2d7021365736baf

Observation 52097bb5-436c-404d-9f47-f50422afecdf · outbound

This paper cites Barkoutsos, Stefan Woerner, and Ivano Tavernelli.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Barkoutsos, Stefan Woerner, and Ivano Tavernelli

Reference 13

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:8586c3f03393ec02cbaac5ff83a1866b62cd2237d02a1f9216364d4dab3526d3

Observation c38fdf30-d4e9-400c-9159-3acc9b3adc80 · outbound

This paper cites DiFilippo, Jun Qin, Daniel Blankenberg, and Omar Shehab.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) DiFilippo, Jun Qin, Daniel Blankenberg, and Omar Shehab

Reference 14

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:379351f6c8b5097844b412aac2e919769f3c24b45f0ec09176bb1929d6b08e5b

Observation dea2fa4d-f60f-4f8e-9a57-7d712369762e · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 15

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:03e35844d545d7af08ea3e2d33ca20e293fae7da84d7a5e6795745100cb66403

Observation f069fbe4-d897-4d94-a529-bd29cd084e1b · outbound

This paper cites Love, Al´ an Aspuru-Guzik, and Jeremy L.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Love, Al´ an Aspuru-Guzik, and Jeremy L

Reference 16

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:7fa468911ec0d16f22da36e6b1eafc4fe925fabbaccfae02848f7d687d8e664e

Observation c0823a55-f24b-49e8-9524-b706056555ab · outbound

This paper cites McClean, Jonathan Romero, Ryan Babbush, and Al´ an Aspuru-Guzik.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) McClean, Jonathan Romero, Ryan Babbush, and Al´ an Aspuru-Guzik

Reference 17

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no resolver link, observed 2026-06-28T12:01:21.569134Z

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:06ffe39d3cdf7b441fa10b22939be17d5d618a0e18d356342a646fc7ad65973f

Observation 0530530e-bf6f-4eb5-bb7f-ff0365bac09a · outbound

This paper cites A Quantum Approximate Optimization Algorithm.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) A Quantum Approximate Optimization Algorithm

Reference 18

Resolution
verified exact
local_arxiv, observed 2026-07-02T01:26:24.602553Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:977ec4a4606d25afa04a574368a34b9016dd811af5e79029894bdaaaf79798a3

Observation bca3526f-f3e5-46d4-8197-903ca748a537 · outbound

This paper cites A Quantum Approximate Optimization Algorithm Applied to a Bounded Occurrence Constraint Problem.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) A Quantum Approximate Optimization Algorithm Applied to a Bounded Occurrence Constraint Problem

Reference 19

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verified exact
local_arxiv, observed 2026-07-02T01:26:24.605405Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-22T06:32:14.747728+00:00.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:b8e7691a4700fb54e7887a47d98d2002f951cc186f55354e91fa099134092e44

Observation 42acb59b-0b3e-4c71-8656-a877855766a3 · outbound

This paper cites Quantum computing in the nisq era and beyond.Quantum, 2:79, 2018.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Quantum computing in the nisq era and beyond.Quantum, 2:79, 2018

Reference 20

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Observation 4f69a4f3-9af3-4549-b066-772d985d0b08 · outbound

This paper cites Ising formulations of many np problems.Frontiers in Physics, 2:5, 2014.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Ising formulations of many np problems.Frontiers in Physics, 2:5, 2014

Reference 21

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Observation b35c301c-1608-4a00-8a59-6cfc02e364eb · outbound

This paper cites Benchmarking the performance of portfolio optimization with qaoa.Quantum Information Processing, 22:25, 2023.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Benchmarking the performance of portfolio optimization with qaoa.Quantum Information Processing, 22:25, 2023

Reference 22

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Observation 4962f4a4-5b45-4eec-9fab-44299321034c · outbound

This paper cites Behera, Emad A.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Behera, Emad A

Reference 23

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Observation 871866af-a3a1-4c86-a05f-1fd5be761e4d · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 24

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Observation cc7b29b9-3d4c-4e2b-ab4a-1f3984e65873 · outbound

This paper cites McClean, Sergio Boixo, Vadim N.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) McClean, Sergio Boixo, Vadim N

Reference 25

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Observation e77c4665-45c5-4af5-94d5-1e7b3654dd4c · outbound

This paper cites Digitized-counterdiabatic quantum approximate optimization algorithm.Physical Review A, 105(4):042612, 2022.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Digitized-counterdiabatic quantum approximate optimization algorithm.Physical Review A, 105(4):042612, 2022

Reference 26

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Observation d039943d-1a00-41e5-bdbb-f98ee0cab330 · outbound

This paper cites Convergence of digitized-counterdiabatic qaoa: circuit depth versus free parameters.Physical Review A, 109(1):012420, 2024.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Convergence of digitized-counterdiabatic qaoa: circuit depth versus free parameters.Physical Review A, 109(1):012420, 2024

Reference 27

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Observation 5f833e55-8a75-4058-8dca-b00a9fb58246 · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 28

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Observation 00162c34-4cf2-442d-9641-d13eb453b053 · outbound

This paper cites Shortcuts to adiabaticity: Concepts, methods, and applications.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Shortcuts to adiabaticity: Concepts, methods, and applications

Reference 29

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Observation 04a46da4-d5cc-4878-91aa-f6872ef84f96 · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 30

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Observation cc10d48c-b128-4417-bb9f-1f54b3b3d9fd · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 31

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Observation b7531615-0d49-4690-9364-acd66301a6e9 · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 32

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Observation 4ec06aff-f6e5-4f29-86c1-0012f99134c2 · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 33

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Observation fc92dcb3-ca9d-46dc-bebd-4c387da481cc · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 34

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Observation fbf34c6d-7cf4-4f01-9900-2d543234faf7 · outbound

This paper cites Hegade, Koushik Paul, Francisco Albarr´ an-Arriagada, Enrique Solano, Adolfo del Campo, and Xi Chen.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Hegade, Koushik Paul, Francisco Albarr´ an-Arriagada, Enrique Solano, Adolfo del Campo, and Xi Chen

Reference 35

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:57796efd4598b2e0e3229915814d6cae5b8d6eda855276366d7e118effbacccd

Observation 30c91fe6-4c6b-4737-9fbe-b02d916ae191 · outbound

This paper cites Ostlund.Modern Quantum Chemistry: Introduction to Advanced Elec- tronic Structure Theory.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Ostlund.Modern Quantum Chemistry: Introduction to Advanced Elec- tronic Structure Theory

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:86ea861c0bf920753bf6d6826d7e0a48fdbda95908b1b81b5d31564e174f2267

Observation b1f4de8d-415f-41a7-8ab7-74402fad4a55 · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 37

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:ef7b6a44eb2e4c0e2d63dff9ebfec76ed2d94f6f255dbeae35deb90fe3c9d015

Observation 1a78fd57-6a6f-40bd-bc7c-e354c33fbdcf · outbound

This paper cites Trucks, John A.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Trucks, John A

Reference 38

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:99c73b9def5c93391f5d8a07294d3bc4b069ec56c28771aca87780c65ad0f45e

Observation c57ad430-ba16-4f5c-b184-1812d0651be2 · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 39

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:d6dca9a187d7190527d3a2e77a458619acc7e01d2d2a0de4d84b1115f4f19459

Observation 72afdd91-27e4-4c31-b188-8c5148be9020 · outbound

This paper cites Perdew and Alex Zunger.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Perdew and Alex Zunger

Reference 40

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:ff2c21ef20b1b2026447c4924707f889e0fc97544ef994b4f30034b9f08797d3

Observation 7bb57349-fac6-4f1f-aba5-b3a06af8e981 · outbound

This paper cites Hohenberg and W.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Hohenberg and W

Reference 41

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:3c41a76aed57297839fd5a0a1392d47a63be8c4f45e5c54649890df0a0e4a009

Observation 52756d0d-0eee-4b91-8640-908bb03960d5 · outbound

This paper cites Kohn and L.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Kohn and L

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:d7fcfe916f772ed7561901bdd040ecf1d0391597a1da34a0b807bd340740a1bd

Observation d6039e16-1e9e-4670-9738-ce2b3a2f8c2c · outbound

This paper cites A consistent and accurate ab initio parametrization of density functional dispersion correction (dft-d) for the 94 elements h–pu.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) A consistent and accurate ab initio parametrization of density functional dispersion correction (dft-d) for the 94 elements h–pu

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:9d8835a82c856fedf5ad916822ecf07b65ea4a880c51cd6215385ebe3178828a

Observation 86ee8de8-abd4-4bfd-a620-8d1039f8e392 · outbound

This paper cites A generally applicable atomic-charge dependent Lon- don dispersion correction.The Journal of Chemical Physics, 150(15):154122, 2019.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) A generally applicable atomic-charge dependent Lon- don dispersion correction.The Journal of Chemical Physics, 150(15):154122, 2019

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no resolver link, observed 2026-06-28T12:01:21.569134Z

Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:4194284ce67793373dd7ed79fe663d0d1018129b2078d7024926e9b78bc5023e

Observation 0cf69d96-0398-4cc6-9ba1-c662f0f305f9 · outbound

This paper cites Long-range corrected hybrid density functionals with damped atom–atom dispersion corrections.Physical Chemistry Chemical Physics, 10(44):6615– 6620, 2008.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Long-range corrected hybrid density functionals with damped atom–atom dispersion corrections.Physical Chemistry Chemical Physics, 10(44):6615– 6620, 2008

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:87f2a4312fd86b954cc3f236e2856b24fda4eb3f0f1b3699ca5e9df49f9f0860

Observation 7de1fea8-1b9e-48be-9358-5ed9e6c6c70c · outbound

This paper cites Effect of the damping function in dispersion corrected density functional theory.Journal of Computational Chemistry, 32(7):1456–1465, 2011.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Effect of the damping function in dispersion corrected density functional theory.Journal of Computational Chemistry, 32(7):1456–1465, 2011

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:758eba3e1f79a15129b5efd898a37196eddd2b93e30e464286c3658f2215d5a8

Observation 24278b58-9079-4bb7-988e-cedb19be8e80 · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 47

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:8b5e73785658aa51491564eab216a0aaff0e80764f04d1e0b546fae6739cdca3

Observation e85ff037-93c6-448b-b9a9-ee9260ca4495 · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 48

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:5c7756d3e18506bb052a758579db91412d5b580332fa83dafe06ef35131fa371

Observation f7dc3809-8a40-431a-ac91-1797126f711d · outbound

This paper cites Ponder and David A.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Ponder and David A

Reference 49

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:f8ab6b3de9afe7d8cae4f88fbc1167743ac23bb83ca738a881ba581217eb7601

Observation 70c233ee-ff54-4b21-a328-13d75f34c8d3 · outbound

This paper cites MacKerell, Donald Bashford, M.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) MacKerell, Donald Bashford, M

Reference 50

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:c6281662cc763a7e048c509325f66a9e81ebc361251626a3f269fd6ce5f2dfcb

Observation 5da2b86a-c38a-4edb-81c7-564e61de1ad7 · outbound

This paper cites MacKerell.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) MacKerell

Reference 51

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Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:c19dc2d706322dcc63540832fac2b72521104b0a8b5648f4197d52975c0a38f9

Observation c1dddd04-3265-4a03-8f0c-f08ee01f4b89 · outbound

This paper cites Springer, 2014.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Springer, 2014

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:901be8929e837f944a998b0bf6b67eb46cddb75ac9c418002dd7fab1e2ca314a

Observation 14d68b40-34b7-4b7a-9ee5-d9a419affa67 · outbound

This paper cites On the hamiltonian replica exchange method for efficient sampling of biomolecular systems: Application to protein structure prediction.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) On the hamiltonian replica exchange method for efficient sampling of biomolecular systems: Application to protein structure prediction

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Resolution
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Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:30726612be5facd38d59d6577e71f2483c5183f82dc984de1821cf41335de2a8

Observation 02aa7b1d-b4a6-4846-bdb7-ffa4d1fa3a05 · outbound

This paper cites Replica exchange with solute scaling: a more effi- cient version of replica exchange with solute tempering (rest2).The Journal of Physical Chemistry B, 115(30):9431–9438, 2011.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Replica exchange with solute scaling: a more effi- cient version of replica exchange with solute tempering (rest2).The Journal of Physical Chemistry B, 115(30):9431–9438, 2011

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no resolver link, observed 2026-06-28T12:01:21.569134Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:afc5d9b45eb8ba0d23c0a3af2a13a1625128ee794a3775f43ca7da5e1d8c69ba

Observation 3a6d716e-a011-4481-bd1a-99e68c034250 · outbound

This paper cites Replica exchange with solute tempering: efficiency in large scale systems.The Journal of Physical Chemistry B, 111(19):5405–5410, 2007.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Replica exchange with solute tempering: efficiency in large scale systems.The Journal of Physical Chemistry B, 111(19):5405–5410, 2007

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Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:bd5210b5be2263934c535cba6336cbfba425dae7e069b55dbc2819594506e455

Observation 787033cb-3b01-42af-baf5-3220cfd494b2 · outbound

This paper cites Jernigan.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Jernigan

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Resolution
unresolved
no resolver link, observed 2026-06-28T12:01:21.569134Z

Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:23a61229801f0bfcd4c9bb1407ac02fb0ec1caf01d31e16bd549385cbd434489

Observation 36a29c6d-66c7-4a04-8fa5-0e2951a978a4 · outbound

This paper cites Fast procedure for reconstruction of full-atom protein models from reduced representations.Journal of Computational Chemistry, 29(9):1460–1465, 2008.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Fast procedure for reconstruction of full-atom protein models from reduced representations.Journal of Computational Chemistry, 29(9):1460–1465, 2008

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Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:275c239a7012bee49b440acb8023c6fa09f639b24e0b5642592b5dcbddba20b3

Observation 0aefd854-a6d1-4835-8d7e-5d1837ab8e9b · outbound

This paper cites an unresolved cited work.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Unresolved cited work

Reference 58

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:5e7c87810193aa005063d72f0c3db0dc92bf585377d40641fe2696c4d8d1f4c1

Observation d2c066ee-36a3-490f-95c7-9864e56c5d13 · outbound

This paper cites Pettersen, Thomas D.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Pettersen, Thomas D

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Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:24cb53f4e90124e5ee69954bc3ad376084af3b596331bfc9261d27f0025865c3

Observation b9575574-1673-4614-980a-03c6a5d319a6 · outbound

This paper cites Marenich, Christopher J.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Marenich, Christopher J

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Resolution
unresolved
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Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:0dd9beefe42bf9994961136c22b947d2215ade879343ba6f609e0e8545365bfe

Observation cfb5589a-5171-4348-a2f8-2062a3d677e6 · outbound

This paper cites Accurate structure prediction of biomolecular interactions with alphafold 3.Nature, 630(8016):493–500, 2024.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Accurate structure prediction of biomolecular interactions with alphafold 3.Nature, 630(8016):493–500, 2024

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:576ec577cb1ba35282153be53808fd8e01666aea76a9f9e8e402c841a5417cd5

Observation 11422be3-959f-4692-bd09-8b36d750cadd · outbound

This paper cites Phillips, David J.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Phillips, David J

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Resolution
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Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:598a05d4769ec1d0d8eb8b3ad4c784cd2bacad773f66fe08a39d09fe162fa78f

Observation 3f5f30e9-d61b-403f-a574-38635f44bfe8 · outbound

This paper cites Best, Xiao Zhu, Jihyun Shim, Pedro E.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Best, Xiao Zhu, Jihyun Shim, Pedro E

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:2e35ef03d8a131ea339bbe57a39243d740ec32213d7d593119f551b45684d99b

Observation 469ea288-ea30-437b-a6dd-a64f872ef1f1 · outbound

This paper cites Jorgensen, Jayaraman Chandrasekhar, Jeffry D.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Jorgensen, Jayaraman Chandrasekhar, Jeffry D

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Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:4b81eb817de0e00ee8b21499b3b6cc669b83def8fb96730c952a9884565f50ee

Observation d2e6a14c-6e33-4a98-b102-d01497371603 · outbound

This paper cites Particle mesh ewald: An n·log (n) method for ewald sums in large systems.The Journal of chemical physics, 98(12):10089–10092, 1993.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Particle mesh ewald: An n·log (n) method for ewald sums in large systems.The Journal of chemical physics, 98(12):10089–10092, 1993

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Resolution
unresolved
no resolver link, observed 2026-06-28T12:01:21.569134Z

Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:5f36632cab45c0659ca123f3484293ce1f24688a1f5c1138e890170a1b37b754

Observation db345a98-0c83-4616-ac26-f5e734e240a6 · outbound

This paper cites Schneider and E.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Schneider and E

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Resolution
unresolved
no resolver link, observed 2026-06-28T12:01:21.569134Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:df5a14de63d7286245663dc4d35d4ee513771737a1f2a0bcb6cc124f8d61d6f9

Observation e635ff83-58ce-4016-98a9-6f9e98387760 · outbound

This paper cites Improved side-chain torsion potentials for the amber ff99sb protein force field.Proteins: Structure, Function, and Bioinformatics, 78(8):1950–1958, 2010.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Improved side-chain torsion potentials for the amber ff99sb protein force field.Proteins: Structure, Function, and Bioinformatics, 78(8):1950–1958, 2010

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Resolution
unresolved
no resolver link, observed 2026-06-28T12:01:21.569134Z

Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:c025412eb21c172e131af3a6c9430d21ec498fef498b1de8e4083e667b3d93cb

Observation adaf1a28-218b-4b94-96db-acab70bcfece · outbound

This paper cites Developing a molecular dynamics force field for both folded and disordered protein states.Proceedings of the National Academy of Sciences, 115(21):E4758–E4766, 2018.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Developing a molecular dynamics force field for both folded and disordered protein states.Proceedings of the National Academy of Sciences, 115(21):E4758–E4766, 2018

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unresolved
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Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:2af38b4bdf65cd1f52887ccc6f45197ba99f3ba5a43e4e10e3168a7464168121

Observation 171bf848-9eef-446e-a5ed-fc4c7199be0a · outbound

This paper cites Lincs: a linear constraint solver for molecular simulations.Journal of computational chemistry, 18(12):1463– 1472, 1997.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Lincs: a linear constraint solver for molecular simulations.Journal of computational chemistry, 18(12):1463– 1472, 1997

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unresolved
no resolver link, observed 2026-06-28T12:01:21.569134Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:e0da3d8328508caff3cb945e079ab827596d5e556f7d1f7c1c54feacde931fe6

Observation 51aeccb4-69df-420b-9d0f-f58303b8c3ac · outbound

This paper cites Wright.Numerical Optimization.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Wright.Numerical Optimization

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Resolution
unresolved
no resolver link, observed 2026-06-28T12:01:21.569134Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:ca6971e766f3d8fb97fc467e32a879de71d119c616d9b1f752d19befc15eeb76

Observation 8bbf5e4f-4314-4108-8904-ea37ff45a325 · outbound

This paper cites Polymorphic transitions in single crystals: A new molecular dynamics method.Journal of Applied Physics, 52(12):7182–7190, 1981.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Polymorphic transitions in single crystals: A new molecular dynamics method.Journal of Applied Physics, 52(12):7182–7190, 1981

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Source-reported events for the cited work

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source=pdf_text observed=2026-06-28T12:01:21.569134Z digest=sha256:1e6e0ac125c7925d7ddfe22f3bcb322f9089df1d2076124d38e5c858e59e1e17

Observation fd94e3f0-c7b1-4181-9c13-c94b96e2c203 · outbound

This paper cites Jernigan.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Jernigan

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Resolution
unresolved
no resolver link, observed 2026-06-28T12:01:21.569134Z

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This paper cites Gallivan and Dennis A.

Peptide Structure Prediction Using Counter-Diabatic Quantum Approximate Optimization Algorithm (CD-QAOA) Gallivan and Dennis A

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