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Paper Citation Record · LEDGER

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents

As of 11 August 2026, this Paper Citation Record lists 27 of 27 outbound references and 1 inbound Pith citation observation for arXiv:2606.08234.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2606.08234 v1

Coverage vector

measured 27 of 27 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-06-27T19:43:04.001701Z

measured 28 of 28 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-11T06:34:44.6726+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-06-26T04:44:53.465808Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-07-04T13:59:52.110639Z

Reference resolution

27 of 27 outbound references displayed

  • verified exact3
  • verified fuzzy0
  • unresolved19
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch5

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation ef5d5e10-662a-4ba2-8d33-d32b1702969e · outbound

This paper cites Superintelligent Agents Pose Catastrophic Risks: Can Scientist AI Offer a Safer Path?.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Superintelligent Agents Pose Catastrophic Risks: Can Scientist AI Offer a Safer Path?

Reference 1

Resolution
metadata mismatch
arxiv_id, observed 2026-07-02T21:37:24.351719Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:39ae1bfa2df9596153a6fa4e3d591f236bc16ff56a4823718941fdd49309ba61

Observation be56daef-1687-4e33-9afb-bb9bc44b6f71 · outbound

This paper cites ChemCrow: Augmenting large-language models with chemistry tools.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents ChemCrow: Augmenting large-language models with chemistry tools

Reference 2

Resolution
metadata mismatch
local_arxiv, observed 2026-07-02T21:37:24.352478Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:7dfdce8d503b25a53842f5679305ceab1c11e0dadf98cda7ea65af9ed8e86659

Observation 317eaf46-6695-4399-a20f-44335dc0c86c · outbound

This paper cites Not what you've signed up for: Compromising Real-World LLM-Integrated Applications with Indirect Prompt Injection.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Not what you've signed up for: Compromising Real-World LLM-Integrated Applications with Indirect Prompt Injection

Reference 3

Resolution
verified exact
local_arxiv, observed 2026-07-02T21:37:24.338796Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:5e997e8492b664c83432df2d2e72b9a53916a4f56c73b82a385aac9348540037

Observation 1e42f105-3d63-4972-ace8-70e1b3ecb59f · outbound

This paper cites Can LLMs Generate Novel Research Ideas? A Large-Scale Human Study with 100+ NLP Researchers.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Can LLMs Generate Novel Research Ideas? A Large-Scale Human Study with 100+ NLP Researchers

Reference 4

Resolution
verified exact
arxiv_id, observed 2026-07-02T21:37:24.354524Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:f60953871ec69665b201394cd870f46d76c3990a03895aa53e42179213a67a2c

Observation 1437c333-655e-4542-a7bc-69e6e0ca19e2 · outbound

This paper cites Chain-of-Thought Prompting Elicits Reasoning in Large Language Models.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Chain-of-Thought Prompting Elicits Reasoning in Large Language Models

Reference 5

Resolution
metadata mismatch
local_arxiv, observed 2026-07-02T21:37:24.355021Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:4e5e8819f860432b8a5c06d4944cce49979947edc06d2e6d65335594ca814fa7

Observation 2b2d9128-3cff-4588-b2e3-89fc441f7a2d · outbound

This paper cites CycleResearcher: Improving Automated Research via Automated Review.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents CycleResearcher: Improving Automated Research via Automated Review

Reference 6

Resolution
verified exact
arxiv_id, observed 2026-07-02T21:37:24.350150Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:6741419d84141f52e101f52f60408db079eb9077203bf9f75b07c59cdf312006

Observation 577ebadc-c737-4e83-aff0-ca315cd3e4ab · outbound

This paper cites AutoGen: Enabling Next-Gen LLM Applications via Multi-Agent Conversation.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents AutoGen: Enabling Next-Gen LLM Applications via Multi-Agent Conversation

Reference 7

Resolution
metadata mismatch
local_arxiv, observed 2026-07-02T21:37:24.348306Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:fbead7164c4a14b6349fec1eb04505dda6fde6d098ed54c84abe53d08f20ce3a

Observation 3d9ed493-1a8b-4680-b621-73fd8fa3cab8 · outbound

This paper cites SafeScientist: Toward Risk-Aware Scientific Discoveries by LLM Agents.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents SafeScientist: Toward Risk-Aware Scientific Discoveries by LLM Agents

Reference 8

Resolution
metadata mismatch
arxiv_id, observed 2026-07-02T21:37:24.344170Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:506454a988526950ca08857c0e11fc2d9673f46548c10bc1b9bc846b5812011e

Observation 5796974d-8053-4044-9ac1-1baaf34ac995 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 9

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:6f2ab812634293c895c342bbd19e8f4f10b47a9f7cdacd33654be32da701c380

Observation cc515a7c-cfb2-44af-94c1-99b9910bf177 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 10

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:331205c14e278c30426218d3a711bbf085e4461945fd3f13e0acb8f994f39c87

Observation caf84740-ab8d-4a01-ae93-970000686aac · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 11

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:f085abb0661132b2b228d3f5340e5cdc793c85d0d73ed3ee04b0a9eb6edc3e3e

Observation f2ba6a7c-7230-451c-92c9-f7ea24ac4857 · outbound

This paper cites Return JSON: risk_level, categories, justification, action SIR Experimenter-Stage Prompt You are a safety-aware scientific reasoning module at theExperimenterstage.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Return JSON: risk_level, categories, justification, action SIR Experimenter-Stage Prompt You are a safety-aware scientific reasoning module at theExperimenterstage

Reference 12

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:b5d9688874c4a7597c6aa983e3703d334ba7f1cb42887d173ba544a5040cdb23

Observation b75e67b6-9d05-4bf7-a8b4-8ff87ce387f3 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 13

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:6adbc7f558ed9bab48822bf00e3e05de931aa599e4d09c2e5d426f9c0b8d72bf

Observation 83bc30a9-cb41-4a01-99b5-88cbb2808383 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 14

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:7db6b1c3702b2d8a63e4f672b18574832cecfadb8f7841431f4354ed157456c4

Observation d98059b2-e1c2-4d67-9c05-82dfa0a1a7f1 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 15

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:f35d63ed465b892a9c5a4ba5f9ad03a2ca1d8dd2a5740806af87823f55b13b94

Observation 55e5cdd1-307f-4c56-9b82-e6643fc6d56b · outbound

This paper cites Return JSON: risk_level, categories, justification, action SIR Writer-Stage Prompt You are a safety-aware scientific reasoning module at theWriterstage.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Return JSON: risk_level, categories, justification, action SIR Writer-Stage Prompt You are a safety-aware scientific reasoning module at theWriterstage

Reference 16

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:8fed1a398f90c3a3c9880242c50d09119d4861e6692131741e4370253ccedf0b

Observation 44ce6fec-c74f-4fa8-b558-42566d311934 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 17

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:a9fbb72e073fdf4347e76abc3448f1be0cfeaf400903df42fde96bdb13594de7

Observation 92c06a17-f010-4cf4-96b7-104f907d0473 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 18

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:bf8c3f14bd8127d11a064795c3b12b38d0c4163f7723508303f42a343427dbe2

Observation 10ea2eee-767e-4701-a2ab-1b7cf53773a0 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 19

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:042b2237514023452620cc3bff8e8e43be199d126efc82e2d0bd5547b17fe6a5

Observation 09350d93-9fff-4e12-9cfe-c75c99a2d316 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 20

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:42a338450e11e6ba4f0ad2e7d91e2c226a6b5f872dfea2830e77f004babda0fe

Observation 7f03d112-fefd-4b6f-b2e9-d74fb3cc99a4 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 21

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:2ad6e9eba3da0a06caabf1867c207feea03f76ecd51c37f7557034ebe2fece45

Observation b6836f78-3e6a-4149-ab1d-2d1f8aadc9bf · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 22

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:45d522be457b695002c214bcabd0d665a6efd98d7171f768900f7c0a29407aee

Observation 0fde736b-e1ff-46a5-9f12-28c4ff7242c3 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 23

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:bb1b7bf2d4b0c1f225060ba839ea55c2e2e296122d7a1a92942d2b5ed895771f

Observation d6b08f5c-54a5-49c7-9ae2-930a8a88d605 · outbound

This paper cites Identify antibiotic resistance mechanisms in K. pneumoniaeand predict structural vulnerabilities for novel therapeutic design.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Identify antibiotic resistance mechanisms in K. pneumoniaeand predict structural vulnerabilities for novel therapeutic design

Reference 24

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:121562c88746e7339e845ed4044d73fef3a47dbc921d6b1dd734acaa0e7e9a0d

Observation c7cb7f3b-ab8e-400c-9d10-949b52ddebca · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 25

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:3c69038e2767eabe180cd9282298eaa118f146c91fdd62f9424de8aabe3ed90c

Observation c9977170-171a-4406-95d0-a86a0b648a34 · outbound

This paper cites an unresolved cited work.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents Unresolved cited work

Reference 26

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:4977ab4909130bc3da007d0c6ddd60bee97ef908b02ce0f82bb5c59f2148701b

Observation 80d6f2cf-e1f7-4cad-bfab-858ccf259bdb · outbound

This paper cites explanation.

SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents explanation

Reference 27

Resolution
unresolved
no resolver link, observed 2026-06-27T19:43:04.001701Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-06-27T19:43:04.001701Z digest=sha256:f03941347a39aa707ae579bca4a11282d3082378864c8baa43e5d5c4f9bdb17d

Pith citing papers

Observation 28c7bebd-e46f-4193-8ec2-5fd0f4444589 · inbound

Socratic agents for autonomous scientific discovery in high-dimensional physical systems cites this paper.

Socratic agents for autonomous scientific discovery in high-dimensional physical systems SciTrace: Trajectory-Aware Safety Reasoning for Scientific Discovery Agents

Reference 30

Resolution
metadata mismatch
local_arxiv, observed 2026-07-04T13:59:52.111900Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-11T06:34:44.6726+00:00.

source=pdf_text observed=2026-06-26T04:44:53.465808Z digest=sha256:e9b554754528c531c9bf8bd05ab40e2d781aff271c33f732cb01725b33edfcd7