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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication

As of 18 August 2026, this Paper Citation Record lists 54 of 54 outbound references and 0 inbound Pith citation observations for arXiv:2606.28395.

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pith.paper-citation-record.v1
2606.28395 v1

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Outbound references

Observation bf23f686-d744-4f39-aa3e-b2549dd84f7f · outbound

This paper cites Communications Biol- ogy6(1), 304 (2023) 1, 2.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Communications Biol- ogy6(1), 304 (2023) 1, 2

Reference 1

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This paper cites Fron- tiers in Immunology15, 1499301 (2024) 1.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Fron- tiers in Immunology15, 1499301 (2024) 1

Reference 2

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This paper cites Advances in neural information pro- cessing systems35, 32897–32912 (2022) 3.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Advances in neural information pro- cessing systems35, 32897–32912 (2022) 3

Reference 3

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication medRxiv pp

Reference 4

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This paper cites Clinical Cancer Research30(8), 1509–1517 (2024) 8.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Clinical Cancer Research30(8), 1509–1517 (2024) 8

Reference 5

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This paper cites In: Proceedings of the IEEE/CVF international conference on com- puter vision.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication In: Proceedings of the IEEE/CVF international conference on com- puter vision

Reference 6

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This paper cites Cancer discovery2(5), 401–404 (2012) 5.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Cancer discovery2(5), 401–404 (2012) 5

Reference 7

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This paper cites NPJ precision oncology4(1), 14 (2020) 2.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication NPJ precision oncology4(1), 14 (2020) 2

Reference 8

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This paper cites In: International conference on ma- chine learning.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication In: International conference on ma- chine learning

Reference 9

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This paper cites Nature Methods pp.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Nature Methods pp

Reference 10

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This paper cites Cancer research83(23), 3861–3867 (2023) 5.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Cancer research83(23), 3861–3867 (2023) 5

Reference 11

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This paper cites Science signaling6(269), pl1–pl1 (2013) 5.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Science signaling6(269), pl1–pl1 (2013) 5

Reference 12

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication In: Proceedings of the IEEE/CVF Inter- national Conference on Computer Vision

Reference 13

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Ad- vances in neural information processing systems33, 21271–21284 (2020) 2

Reference 14

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Nature biomedical engineering4(8), 827–834 (2020) 1, 2

Reference 15

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication In: Proceedings of the IEEE/CVF conference on com- puter vision and pattern recognition

Reference 16

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication In: Proceedings of the IEEE/CVF con- ference on computer vision and pattern recognition

Reference 17

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication In: International con- ference on machine learning

Reference 18

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Neural Computing and Applications37(16), 9311– 9330 (2025) 1

Reference 19

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication In: Advances in Neural Infor- mation Processing Systems (Dec 2024) 2, 5, 6, 8

Reference 20

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication In: Proceedings of the IEEE/CVF Conference on Computer Vision and Pat- tern Recognition

Reference 21

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Briefings in Bioinformatics25(1) (2023) 1, 2, 6

Reference 22

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication npj Breast Cancer (2025) 8

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication NAR cancer6(4), zcae046 (2024) 1

Reference 24

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Nature cancer1(8), 789–799 (2020) 2

Reference 25

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication ArXiv pp

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication The Breast66, 183–190 (2022) 1

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Bioin- formatics38(14), 3629–3637 (2022) 1

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Clinical cancer re- search16(21), 5222–5232 (2010) 1

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication medRxiv pp

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication BioRxiv pp

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Commu- nications Engineering3(1), 104 (2024) 1

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Cancer Research83(17), 2970–2984 (2023) 2

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Na- ture Communications15(1), 9886 (2024) 1, 2

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication NPJ precision oncology5(1), 87 (2021) 2

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Spade: Spatial transcriptomics and pathology alignment using a mixture of data experts for an expressive latent space

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This paper cites Rejuvenating image-GPT as Strong Visual Representation Learners.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Rejuvenating image-GPT as Strong Visual Representation Learners

Reference 37

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This paper cites BioRxiv p.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication BioRxiv p

Reference 38

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This paper cites Nature communications11(1), 3877 (2020) 1, 2.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Nature communications11(1), 3877 (2020) 1, 2

Reference 39

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This paper cites Clinical cancer research26(17), 4682–4687 (2020) 1.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Clinical cancer research26(17), 4682–4687 (2020) 1

Reference 40

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication bioRxiv pp

Reference 41

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Observation b51cc2ed-092c-4016-b743-5a4a30bc1d23 · outbound

This paper cites Expert review of molecular diagnostics9(5), 417–422 (2009) 1.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Expert review of molecular diagnostics9(5), 417–422 (2009) 1

Reference 42

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Communications Medicine3(1), 44 (2023) 5

Reference 43

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This paper cites Molecu- lar diagnosis & therapy24(5), 621–632 (2020) 1.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Molecu- lar diagnosis & therapy24(5), 621–632 (2020) 1

Reference 44

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Cell genomics 1(3) (2021) 5

Reference 45

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication In: Proceedings of the IEEE/CVF Conference on Com- puter Vision and Pattern Recognition

Reference 46

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Na- ture communications15(1), 10232 (2024) 1

Reference 47

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Cancer research81(19), 5115–5126 (2021) 2

Reference 48

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Nature genetics45(10), 1113– 1120 (2013) 5

Reference 49

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Advances in Neural Infor- mation Processing Systems36, 70626–70637 (2023) 1, 2

Reference 50

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Observation 0534e7e8-d7ab-4a38-8d64-fee276dd160e · outbound

This paper cites Virchow2: Scaling Self-Supervised Mixed Magnification Models in Pathology.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Virchow2: Scaling Self-Supervised Mixed Magnification Models in Pathology

Reference 51

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arxiv_id, observed 2026-06-30T03:04:15.277608Z

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Observation d7ec7054-70af-409b-b4a1-e9767be53ba6 · outbound

This paper cites Downstream application of JASPR features and compared baseline architectures.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Downstream application of JASPR features and compared baseline architectures

Reference 52

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Observation a7842bff-e54c-454b-87c8-32c77f32bcb5 · outbound

This paper cites Overview of methods that model histology images and paired genomics data.

JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Overview of methods that model histology images and paired genomics data

Reference 53

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arxiv_id, observed 2026-06-30T03:04:15.281081Z

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Observation 0f4a4907-b807-42a0-bb45-b38257554d43 · outbound

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JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication Unresolved cited work

Reference 54

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