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Paper Citation Record · LEDGER

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware

As of 10 August 2026, this Paper Citation Record lists 41 of 41 outbound references and 1 inbound Pith citation observation for arXiv:2607.06971.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2607.06971 v1

Coverage vector

measured 41 of 41 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-07-10T20:04:34.878812Z

measured 42 of 42 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-10T06:31:04.303077+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-08T12:12:23.290955Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-08-08T12:12:24.440461Z

Reference resolution

41 of 41 outbound references displayed

  • verified exact1
  • verified fuzzy39
  • unresolved1
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation b50f8829-719a-4afb-8486-148e2bbac878 · outbound

This paper cites Leveraging machine learning models for peptide–protein interaction prediction.RSC Chemical Biology, 5(5):401–417, 2024.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Leveraging machine learning models for peptide–protein interaction prediction.RSC Chemical Biology, 5(5):401–417, 2024

Reference 1

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raw_fallback, observed 2026-07-10T20:07:33.782573Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:29ff4d1e589db8466e99d6209b3772ad9f10a9028f6bb5bd30f143ed7b72d2f7

Observation 244303da-5837-485b-b107-fa18ed11c6ca · outbound

This paper cites Alpha&esmhfolds: a web server for comparing alphafold2 and esmfold models of the human reference proteome.Journal of Molecular Biology, 436(17):168593, 2024.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Alpha&esmhfolds: a web server for comparing alphafold2 and esmfold models of the human reference proteome.Journal of Molecular Biology, 436(17):168593, 2024

Reference 2

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:608194ed98318b0aab5bd2dcbb39021ec74ac41d2ba8a831d1d346e746d7a21e

Observation fe97a235-0710-4f41-9c68-f0b91079c33c · outbound

This paper cites Qdock- bank: A dataset for ligand docking on protein fragments predicted on utility-level quantum computers.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Qdock- bank: A dataset for ligand docking on protein fragments predicted on utility-level quantum computers

Reference 3

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:60e90cdf3f17f9e645a304f2f1b62a436a2f9303bd7c4f9d7a7dd691a316d1d1

Observation fdfd22c9-b220-4eb8-bc5d-b33015251400 · outbound

This paper cites Describing protein folding kinetics by molecular dynamics simulations.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Describing protein folding kinetics by molecular dynamics simulations

Reference 4

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raw_fallback, observed 2026-07-10T20:07:33.790630Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:8b23c3197d917875368cf42ab7d5c7c3b8b49a8a08f6bdbf74c1e237e8ea897f

Observation 9e6adb52-5507-4d26-b5e9-13ffc9802d9a · outbound

This paper cites New monte carlo algorithms for protein folding.Current opinion in structural biology, 9(2):177–183, 1999.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware New monte carlo algorithms for protein folding.Current opinion in structural biology, 9(2):177–183, 1999

Reference 5

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raw_fallback, observed 2026-07-10T20:07:33.815370Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:c5450a41ef634bde6c840e9381500aa7cbba4e8fc5b07542b83cd655a6bf2783

Observation 0b98a9ff-4886-4c69-bfbc-b64733fa33a6 · outbound

This paper cites Application of enhanced sampling monte carlo methods for high-resolution protein-protein docking in rosetta.PLoS One, 10(6):e0125941, 2015.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Application of enhanced sampling monte carlo methods for high-resolution protein-protein docking in rosetta.PLoS One, 10(6):e0125941, 2015

Reference 6

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raw_fallback, observed 2026-07-10T20:07:33.770692Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:8a7b3da511850382b432ed49c37c59e8bf34d85ef6b64820746b091a1de25786

Observation 615a3baa-981c-44a1-922b-e154a0f98d93 · outbound

This paper cites Alphafold2 and its applications in the fields of biology and medicine.Signal Transduction and Targeted Therapy, 8(1):115, 2023.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Alphafold2 and its applications in the fields of biology and medicine.Signal Transduction and Targeted Therapy, 8(1):115, 2023

Reference 7

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raw_fallback, observed 2026-07-10T20:07:33.772441Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:d4bca8355faf28dfa46c848b1e6ff4fd1b1f16197f5e3b9ca89f0dd72f64460d

Observation d6dd70ed-677d-4365-9b56-17748672bd08 · outbound

This paper cites Accurate structure prediction of biomolecular interactions with alphafold 3.Nature, 630(8016):493–500.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Accurate structure prediction of biomolecular interactions with alphafold 3.Nature, 630(8016):493–500

Reference 8

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raw_fallback, observed 2026-07-10T20:07:33.774201Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:c837cc8a24e88168ef65ea157019905ccf6728ab68339942d381c05ecabd7eb7

Observation 660f0adb-29aa-4ced-8bdf-d422889bb43c · outbound

This paper cites Quantum algorithms for quantum chemistry and quantum materials science.Chemical reviews, 120(22):12685–12717.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Quantum algorithms for quantum chemistry and quantum materials science.Chemical reviews, 120(22):12685–12717

Reference 9

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raw_fallback, observed 2026-07-10T20:07:33.809588Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:d0dcbbb50783ff02509d743843bb1df178afc5a519951654faa88e8c73a57906

Observation da610e14-4df5-4ddb-9dde-4dbde0c34cb5 · outbound

This paper cites qubit-adapt-vqe: An adaptive algorithm for constructing hardware-efficient ansätze on a quantum processor.PRX Quantum, 2(2):020310, 2021.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware qubit-adapt-vqe: An adaptive algorithm for constructing hardware-efficient ansätze on a quantum processor.PRX Quantum, 2(2):020310, 2021

Reference 10

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:d1c903c366af90886ebe4c2ead20cf08d0a5a5a9ca2ab7fca0ca396890800094

Observation fc851e89-ec80-4f6c-bbad-bbab47c797be · outbound

This paper cites A quantum framework for protein binding-site structure prediction on utility-level quantum processors.Advanced Science, 13(12):e13641, 2026.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware A quantum framework for protein binding-site structure prediction on utility-level quantum processors.Advanced Science, 13(12):e13641, 2026

Reference 11

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raw_fallback, observed 2026-07-10T20:07:33.817393Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:bdb43f716c3de1fff9f5fcca6273fc93b25e8a944a81d2e98a04acdb6f281d6d

Observation e2d762ba-4f71-41de-9cb6-12c157681541 · outbound

This paper cites A hybrid quantum-ai framework for protein structure prediction on nisq devices.arXiv preprint arXiv:2510.06413, 2025.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware A hybrid quantum-ai framework for protein structure prediction on nisq devices.arXiv preprint arXiv:2510.06413, 2025

Reference 12

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arxiv_id, observed 2026-07-10T20:07:33.424800Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:b5fe633ba62d49df4dcaa6ef498bfd68de9ebfac1dc657df7d5d09729fe874f2

Observation d34b6552-99c5-485c-8eee-2cdfa5d52316 · outbound

This paper cites Chemistry beyond the scale of exact diagonalization on a quantum-centric supercomputer.Science Advances, 11(25):eadu9991, 2025.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Chemistry beyond the scale of exact diagonalization on a quantum-centric supercomputer.Science Advances, 11(25):eadu9991, 2025

Reference 13

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raw_fallback, observed 2026-07-10T20:07:33.813514Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:3cdf2d3a20367ff60496464174d11b3aa6e88c41349f686cf27be7d2b7716967

Observation f65cb596-3342-4f8f-9873-c0f10d41782a · outbound

This paper cites Quantum power method by a superposition of time-evolved states.PRX Quantum, 2(1):010333, 2021.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Quantum power method by a superposition of time-evolved states.PRX Quantum, 2(1):010333, 2021

Reference 14

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raw_fallback, observed 2026-07-10T20:07:33.762556Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:ec6a3009dfea11b719e4efe9eb7d108170f32bb9f92473420556351499762243

Observation f86383ab-2116-4a6d-a76e-8df30ae747fa · outbound

This paper cites Protein folding thermodynamics and dynamics: where physics, chemistry, and biology meet.Chemical reviews, 106(5):1559–1588, 2006.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Protein folding thermodynamics and dynamics: where physics, chemistry, and biology meet.Chemical reviews, 106(5):1559–1588, 2006

Reference 15

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raw_fallback, observed 2026-07-10T20:07:33.764516Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:2af356e4550df1de118d36fde53f3f0fc97581ea12e29fbd9aa16ece003388d0

Observation 9ab4f966-4aba-4b7a-8ae1-b37e65fd6350 · outbound

This paper cites Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics.Biochemistry, 39(37):11177–11183, 2000.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics.Biochemistry, 39(37):11177–11183, 2000

Reference 16

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raw_fallback, observed 2026-07-10T20:07:33.766568Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:075dcbf9aa2ffbe996ca04cb1792e4df661f0a6bfe541191fa5842b3cdd5cea6

Observation 26078160-b618-4243-8163-643509cd7d24 · outbound

This paper cites Molecular dynamics, monte carlo simulations, and langevin dynamics: a computational review.BioMed research international, 2015(1):183918, 2015.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Molecular dynamics, monte carlo simulations, and langevin dynamics: a computational review.BioMed research international, 2015(1):183918, 2015

Reference 17

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raw_fallback, observed 2026-07-10T20:07:33.785966Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:127ad108e5fa6a0f7a38e672575c2b129d696db6903d18694d01c0029423414b

Observation e5f88b3a-db23-4795-b923-15c8ac3dd60e · outbound

This paper cites Theory of protein folding: the energy landscape perspective.Annual review of physical chemistry, 48(1):545–600, 1997.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Theory of protein folding: the energy landscape perspective.Annual review of physical chemistry, 48(1):545–600, 1997

Reference 18

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raw_fallback, observed 2026-07-10T20:07:33.773490Z

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source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:4f825b963fabb9b92d080ad150aa18c3a3e88b7a093d3277c917b509f6f284ac

Observation abd818a6-fe64-4193-967a-988f65a2b51c · outbound

This paper cites The structural basis of peptide-protein binding strategies.Structure, 18(2):188–199, 2010.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware The structural basis of peptide-protein binding strategies.Structure, 18(2):188–199, 2010

Reference 19

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raw_fallback, observed 2026-07-10T20:07:33.777488Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:9768afba2942df8534f5cd7ad80db92c65825efbe544fff3f7773847ae22f093

Observation 41ba87a9-af6c-4d31-b9e2-ece21ce1c928 · outbound

This paper cites The energy landscapes and motions of proteins.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware The energy landscapes and motions of proteins

Reference 20

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raw_fallback, observed 2026-07-10T20:07:33.792494Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:16fba5b9575e6102035fa863c18a84619e12b9f501115281fd6121e2c3f822e3

Observation 9135a556-383b-482b-bfae-65e91038bbde · outbound

This paper cites Peptide conformational sampling using the quantum approximate optimization algorithm.npj Quantum Information, 9(1):70, 2023.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Peptide conformational sampling using the quantum approximate optimization algorithm.npj Quantum Information, 9(1):70, 2023

Reference 21

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:79ff7cff6ef8d98e28cce96610a99897a43d9f6a1b046da775ef1dabf8c6dd07

Observation 428c569c-f62c-4ede-ab3a-0f41f2b15a07 · outbound

This paper cites The relation between the divergence of sequence and structure in proteins.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware The relation between the divergence of sequence and structure in proteins

Reference 22

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raw_fallback, observed 2026-07-10T20:07:33.756230Z

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No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:e77d3e1f0473535d04f3ec936f9d610ccdfdc92b50b94038be4e0ab4d227b9aa

Observation 228bdc74-3534-4ffe-af60-ce8cdaba0911 · outbound

This paper cites Protein folding and misfolding.Nature, 426(6968):884–890.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Protein folding and misfolding.Nature, 426(6968):884–890

Reference 23

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raw_fallback, observed 2026-07-10T20:07:33.758142Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:eaa85281fcc17d2099e9507b77e5606d45f33a54e4d340ac074c91ef9592d4cc

Observation fa2ce4ef-e533-4c04-8abd-55cc42832b33 · outbound

This paper cites Resource-efficient quantum algorithm for protein folding.npj Quantum Information, 7(1):38, 2021.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Resource-efficient quantum algorithm for protein folding.npj Quantum Information, 7(1):38, 2021

Reference 24

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raw_fallback, observed 2026-07-10T20:07:33.768875Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:d3ab5fe84deb799b0b2e88fb058343912da427b36960827dae052be3b40041a6

Observation 9cd2e0a3-0d81-49ea-b48b-00e0ea2486ab · outbound

This paper cites A new substitution matrix for protein sequence searches based on contact frequencies in protein structures.Protein Engineering, Design and Selection, 6(3):267–278, 1993.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware A new substitution matrix for protein sequence searches based on contact frequencies in protein structures.Protein Engineering, Design and Selection, 6(3):267–278, 1993

Reference 25

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raw_fallback, observed 2026-07-10T20:07:33.750030Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:c9221603600acb6dbf5b625e8142ca428fa12ba4876ea57ca041fa5332072d2b

Observation a948d688-f995-4cd8-a956-127ce5084699 · outbound

This paper cites an unresolved cited work.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Unresolved cited work

Reference 26

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raw_fallback, observed 2026-07-10T20:07:33.775933Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:14d54a15f6c946808461c348872b2f6346aab59f714cc6ad621ee8dad5ae1d1d

Observation 4d72ae36-dd52-422d-a5e8-cb9f74a07e0b · outbound

This paper cites Theory for the folding and stability of globular proteins.Biochemistry, 24(6):1501–1509.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Theory for the folding and stability of globular proteins.Biochemistry, 24(6):1501–1509

Reference 27

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raw_fallback, observed 2026-07-10T20:07:33.779904Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:639611985f1e3a52cc9f0fc947736f61f067bf5cb52b3cf91ea639b1db4a5fec

Observation 6b1c7dc7-09e2-4340-8a5d-03ee05477e7f · outbound

This paper cites Stereochemistry of polypeptide chain configurations.J.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Stereochemistry of polypeptide chain configurations.J

Reference 28

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raw_fallback, observed 2026-07-10T20:07:33.821438Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:54755454f885d73da3c3c99625036faafc59d5dcb30a93c176a148d2470aa406

Observation 3b0b7f35-8c31-4f4a-9a5c-f824d25d3872 · outbound

This paper cites Efficient quantum algorithms for simulating sparse hamiltonians.Communications in Mathematical Physics, 270(2):359–371.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Efficient quantum algorithms for simulating sparse hamiltonians.Communications in Mathematical Physics, 270(2):359–371

Reference 29

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raw_fallback, observed 2026-07-10T20:07:33.801466Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:52afc5e3ffc1c17b9c515182ce94fbe7c543d420c62d247333f37703fac4875e

Observation 9990728b-f62c-4113-9d10-852cb200f489 · outbound

This paper cites Estimation of effective interresidue contact energies from protein crystal structures: quasi-chemical approximation.Macromolecules, 18(3):534–552, 1985.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Estimation of effective interresidue contact energies from protein crystal structures: quasi-chemical approximation.Macromolecules, 18(3):534–552, 1985

Reference 30

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raw_fallback, observed 2026-07-10T20:07:33.805570Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:cc3df9d4d6554021053845cc2e1630bf7ff7f49e091d5b5757798276b8f0285d

Observation f5e174e7-99c6-492e-bf38-50f24bbff567 · outbound

This paper cites All-atom empirical potential for molecular modeling and dynamics studies of proteins.The journal of physical chemistry B, 102(18):3586–3616, 1998.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware All-atom empirical potential for molecular modeling and dynamics studies of proteins.The journal of physical chemistry B, 102(18):3586–3616, 1998

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.803649Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:54706ce2bdb310ab78e8aa7340fc735e3caaa4857aa94eada28fe74b46b88576

Observation a5ffe11e-f618-491d-91c5-c5cd8f358dd8 · outbound

This paper cites Openmm 8: molecular dynamics simulation with machine learning potentials.The Journal of Physical Chemistry B, 128(1):109–116.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Openmm 8: molecular dynamics simulation with machine learning potentials.The Journal of Physical Chemistry B, 128(1):109–116

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.819598Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:33b716536c6ef83369e1122ac3f65dd7b02c439d4881f9cd5b490d06643fa802

Observation dfe05efe-5fe3-47f3-a12b-24d46ac573d1 · outbound

This paper cites Pyrosetta: a script-based interface for implementing molecular modeling algorithms using rosetta.Bioinformatics, 26(5):689–691.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Pyrosetta: a script-based interface for implementing molecular modeling algorithms using rosetta.Bioinformatics, 26(5):689–691

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.823420Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:44bccd0d0a231ccaf443bed1005b96ecd5f2af7d949e43514dd4566574b838bc

Observation 306a1370-4b32-4389-86a5-c9214f9e191c · outbound

This paper cites The maxwell–boltzmann distribution.Molecular Physics, 103(21-23):2821–2828, 2005.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware The maxwell–boltzmann distribution.Molecular Physics, 103(21-23):2821–2828, 2005

Reference 34

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.788802Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:97702aec991f6964356517f3d9e5580f4e52152b8855bcd3a3bffe293b085d39

Observation 6879cf1a-df58-4cbe-a5ea-ba9b7953e92b · outbound

This paper cites The pdbbind database: method- ologies and updates.Journal of medicinal chemistry, 48(12):4111–4119, 2005.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware The pdbbind database: method- ologies and updates.Journal of medicinal chemistry, 48(12):4111–4119, 2005

Reference 35

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.751994Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:1ab3696e0bbaec5b9eb802f8e29bd9b40b5b3720b29eb38327eb1dc74b114370

Observation 7da82e91-7796-47e0-9ba0-8df1df6f17a4 · outbound

This paper cites Colabfold: making protein folding accessible to all.Nature methods, 19(6):679–682.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Colabfold: making protein folding accessible to all.Nature methods, 19(6):679–682

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.796812Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:f4c8bc4b3f0ca7b2095e9229f7cbea94aeee081d6c28322607f09d4ff8a51e63

Observation 2a3c754c-717d-4024-a144-d81ac49b393e · outbound

This paper cites Language models of protein sequences at the scale of evolution enable accurate structure prediction.bioRxiv, 2022.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Language models of protein sequences at the scale of evolution enable accurate structure prediction.bioRxiv, 2022

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.786776Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:f994885c91a41c8b92bb27ce3334a7e33e2f43b142012e7fa7bae1c4e64db4ab

Observation 75623a9a-e891-4084-815a-afca945bd075 · outbound

This paper cites Lawrence Zitnick, Jerry Ma, and Rob Fergus.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Lawrence Zitnick, Jerry Ma, and Rob Fergus

Reference 38

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.811373Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:bb81da0eef42c864e9251df3b097461f37eda04cc020b33bbf383f6942316389

Observation e3eb6763-6d1e-48fa-ad48-8f2eae004929 · outbound

This paper cites High-resolution de novo structure prediction from primary sequence.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware High-resolution de novo structure prediction from primary sequence

Reference 39

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.798984Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:2b2c31085ef67f76f22d775887e81aec6e51d49241eca7d4bfb5e7bef33a47ac

Observation 3a570804-3f84-42bb-b36c-2d3f22e41e44 · outbound

This paper cites Easy and accurate protein structure prediction using colabfold.Nature Protocols, 20(3):620–642, 2025.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware Easy and accurate protein structure prediction using colabfold.Nature Protocols, 20(3):620–642, 2025

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.767753Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:897888b80a04d2c4f0c1bced7592258a6b22dfa6eb08c52c05b7bb33e56dac29

Observation 583d99d0-dd16-4c45-b4f3-6aec41b2c3b1 · outbound

This paper cites OpenFold: Retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization.bioRxiv, 2022.

Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware OpenFold: Retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization.bioRxiv, 2022

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-07-10T20:07:33.794514Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-07-10T20:04:34.878812Z digest=sha256:1537ce697885e4efdb579aa8afd608631b5f78d6df7115ce93f136498b5a2b1f

Pith citing papers

Observation f95d611d-a194-4e33-9def-f2c5820a9ce3 · inbound

A Quantum Circuit Framework for Protein Ensemble-Level Energetics cites this paper.

A Quantum Circuit Framework for Protein Ensemble-Level Energetics Quantum Sampling Architecture for Protein Structure Reconstruction on Utility-Scale Hardware

Reference 21

Resolution
verified exact
local_arxiv, observed 2026-08-08T12:12:24.446183Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

source=pdf_text observed=2026-08-08T12:12:23.290955Z digest=sha256:d963bfcbeb4c9219bb7c36510921d60e5a9ee542cdb94f87f890d4fef00d0db6