SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery | Paper Citation Record

Observation 75de79fb-7fe0-4342-8800-35eb092375d8 · outbound

This paper cites Prot2Text: Multimodal Protein's Function Generation with GNNs and Transformers.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Prot2Text: Multimodal Protein's Function Generation with GNNs and Transformers

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Observation 5d657397-05a4-43a6-b728-19b1d2fd4c58 · outbound

This paper cites Nature 630:493–500.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature 630:493–500

Reference 2

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Observation 048e65a9-f110-4a12-9c51-0ceae32997b2 · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Bioinformatics 31(13):2214–2216

Reference 3

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://allenai.org/bl og/ai2-scholarqa (accessed 4 July 2026)

Reference 4

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This paper cites Available at https: //www.anthropic.com/news/model-context-protocol (accessed 4 July 2026).

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https: //www.anthropic.com/news/model-context-protocol (accessed 4 July 2026)

Reference 5

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This paper cites Available at https://www.anthropic.com/news/claude-science-ai-workbench (accessed 4 July 2026).

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://www.anthropic.com/news/claude-science-ai-workbench (accessed 4 July 2026)

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Observation 4e27f78f-a67f-4f89-a45f-c55dff8d3212 · outbound

This paper cites Nature 650(8103):857–863.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature 650(8103):857–863

Reference 7

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Observation eb3fd56d-8f3b-481b-aa31-bf30366be13f · outbound

This paper cites Journal of Medicinal Chemistry 53(7):2719–2740.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Journal of Medicinal Chemistry 53(7):2719–2740

Reference 8

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This paper cites Nature Chemistry 4:90–98.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature Chemistry 4:90–98

Reference 9

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nucleic Acids Research 51(W1):W46–W50

Reference 10

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Observation 5785e8b0-7d0b-4bdb-a374-4e11dbe861f1 · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature 624:570–578

Reference 11

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Observation ab544cbe-eb82-4598-96f5-4ce10636f09d · outbound

This paper cites Nature Machine Intelligence 6(5):525–535.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature Machine Intelligence 6(5):525–535

Reference 12

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Unresolved cited work

Reference 13

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Observation 059d0ed9-0780-4d28-9d25-b315bbfa6188 · outbound

This paper cites Available at https://github.com/delibae/claude-prism (accessed 4 July 2026) 37.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://github.com/delibae/claude-prism (accessed 4 July 2026) 37

Reference 14

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This paper cites Available at https://help.consensus .app/en/articles/12641232-research-agent (accessed 4 July 2026).

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://help.consensus .app/en/articles/12641232-research-agent (accessed 4 July 2026)

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Observation 8a640dfd-e07e-454d-9f0b-1422c0b44f47 · outbound

This paper cites Science 378(6615):49–56.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Science 378(6615):49–56

Reference 16

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Observation f0a839cf-5b55-4a40-93f4-3ae6c1ce052f · outbound

This paper cites Available at https://elicit.com/ (accessed 4 July 2026).

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://elicit.com/ (accessed 4 July 2026)

Reference 17

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Observation d180f8f1-d5c4-4a83-bb9a-c3e5a1dd24a8 · outbound

This paper cites Journal of Cheminformatics 1:8.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Journal of Cheminformatics 1:8

Reference 18

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Observation 0c3be5de-f44a-4434-916a-3cfcac50309e · outbound

This paper cites Available at https://www.futurehouse.org/news/launching-futurehouse-platform-ai-agents (accessed 4 July 2026).

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://www.futurehouse.org/news/launching-futurehouse-platform-ai-agents (accessed 4 July 2026)

Reference 19

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This paper cites Advanced Materials https://doi.org/10.1002/adma.202413523.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Advanced Materials https://doi.org/10.1002/adma.202413523

Reference 20

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Observation c42f31b9-08b8-4e1d-a345-479d4efdb131 · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Unresolved cited work

Reference 22

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature 655(8122):487–496

Reference 23

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Observation bd8e9ec5-ead1-4d00-8dcf-da08277079f0 · outbound

This paper cites Science 387(6736):850–858.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Science 387(6736):850–858

Reference 24

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature Methods 18(11):1342–1351

Reference 25

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This paper cites bioRxiv https://doi.org/10.1101/2025.05.30.656746 38.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery bioRxiv https://doi.org/10.1101/2025.05.30.656746 38

Reference 26

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This paper cites W3c member submission, World Wide Web Consortium, available at https://www.w3.org/submissions/201 3/SUBM-prov-json-20130424/.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery W3c member submission, World Wide Web Consortium, available at https://www.w3.org/submissions/201 3/SUBM-prov-json-20130424/

Reference 27

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery NEJM AI 2(1)

Reference 28

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This paper cites In: Advances in Neural Information Processing Systems, pp 10088–10116, https: //doi.org/10.52202/079017-0324.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery In: Advances in Neural Information Processing Systems, pp 10088–10116, https: //doi.org/10.52202/079017-0324

Reference 29

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature 596(7873):583–589

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature Reviews Microbiology 17:167–180

Reference 31

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Language agents achieve superhuman synthesis of scientific knowledge

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery https://ww w.rdkit.org; software archive https://doi.org/10.5281/zenodo.591637

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Science 379(6637):1123–1130

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Advanced Drug Delivery Reviews 46(1–3):3–26

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature Communications 14(1):1155

Reference 36

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature 651:914–919

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Observation 7b8ade01-c0e8-498f-8be2-25c590fef1da · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery W3C Recommendation, https://www.w3.org/TR/prov-dm/ 39

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature Chemical Biology 16:60–68

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Observation ea06214b-3d7a-4b1b-8947-ec347cc7284c · outbound

This paper cites Available at https://docs.omicos.cn/zh/part 1/01-overview.html (accessed 4 July 2026).

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://docs.omicos.cn/zh/part 1/01-overview.html (accessed 4 July 2026)

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://docs.omicos.cn/zh/pa rt1/08-starting-cli.html (accessed 4 July 2026)

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Observation 2053f53d-84a5-4bcf-b2de-b8f820ed1d2a · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://docs.omicos.cn/zh/ part1/07-starting-serve.html (accessed 4 July 2026)

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Observation cb756ca5-40f5-478f-8500-a771b441e6a9 · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://github.com/TianGzlab/OmicsClaw (accessed 4 July 2026)

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Observation f6d6fcf7-fff2-482c-80b7-85fe703d65c1 · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature Genetics 53:322–331

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Observation cf22c295-8c8a-4bfb-9289-11dd48096dfd · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Biochemical Journal 448(3):417–423

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Resolution: verified exact; doi, observed 2026-08-01T21:38:39.693578Z

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Observation 0c1a0463-bc19-4715-aab0-5b6d2b18dde1 · outbound

This paper cites bioRxiv https://doi.org/10.1101/2025.06.14 .659707.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery bioRxiv https://doi.org/10.1101/2025.06.14 .659707

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Resolution: verified exact; doi, observed 2026-08-01T21:38:39.524311Z

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Observation bddd57e6-569e-4464-a8a1-ba0473f5fa2e · outbound

This paper cites BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuning.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuning

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Observation 00d1eb16-ea66-461b-be47-9fd2d1885228 · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature Biomedical Engineering 10:245–258

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Observation 0986b7d5-4ac8-4379-b242-ed6e9e25ebdf · outbound

This paper cites bioRxiv https://doi.org/10.1101/2025.04.14.64885 0.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery bioRxiv https://doi.org/10.1101/2025.04.14.64885 0

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Resolution: verified exact; doi, observed 2026-08-01T21:38:39.427877Z

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Observation d800fe7e-71bc-4ddf-ab22-e0c8e9912af6 · outbound

This paper cites Science 357(6347):168–175.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Science 357(6347):168–175

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Journal of Chemi- cal Information and Modeling 50(5):742–754

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Resolution: verified exact; doi, observed 2026-08-01T21:38:39.324911Z

Source-reported events for the cited work

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Observation e28e82fb-75c0-4777-af6d-f8b0e9e81660 · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery PLoS Computational Biology 9(10):e1003285

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Observation a38884b0-1a69-490a-ae7a-8e70edfd32ac · outbound

This paper cites In: Findings of the Association for Computational Linguistics: EMNLP 2025.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery In: Findings of the Association for Computational Linguistics: EMNLP 2025

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Resolution: unresolved; no resolver link, observed 2026-08-01T21:34:45.329729Z

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Observation 6aa39649-ad80-4994-b296-3b8e8dd06da4 · outbound

This paper cites Science 353(6294):78–82.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Science 353(6294):78–82

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Observation 076ffa8d-5782-4e47-a0d4-7197ece97c71 · outbound

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature 646:716–723

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Observation 4eb18d6e-0cc5-4777-9816-2c2263e74fee · outbound

This paper cites Available at https://github.com/swaruplab/operon (accessed 4 July 2026).

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Available at https://github.com/swaruplab/operon (accessed 4 July 2026)

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Resolution: unresolved; no resolver link, observed 2026-08-01T21:34:45.494865Z

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Observation 31ab4c95-ff73-4245-9a79-2d1dca6b04e7 · outbound

This paper cites Nature 624:86–91.

SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature 624:86–91

Reference 57

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature 620:1089–1100

Reference 60

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Scientific Data 3:160018

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery The AI Scientist-v2: Workshop-Level Automated Scientific Discovery via Agentic Tree Search

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Benchmarking virtual cell models for in-the-wild perturbation response

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery Nature Biotechnology 39(11):1375–1384

Reference 67

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SciForge: An AI-Native, Multimodal Workbench for Scientific Discovery https://doi.org/10.1093/nar/gk ae1010

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Pith citing papers