ABOPD: Antibody CDR Design via On-Policy Distillation | Paper Citation Record

Observation 15a734de-05b2-4f35-8a43-8b67c8668d21 · outbound

This paper cites an unresolved cited work.

ABOPD: Antibody CDR Design via On-Policy Distillation Unresolved cited work

Reference 1

Resolution: verified exact; doi, observed 2026-08-01T14:18:36.778455Z

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No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation 9c63d7c6-7f3a-4418-8266-eabc475ad29d · outbound

This paper cites RosettaAntibodyDesign(RAbD):Ageneralframework for computational antibody design.PLOS Computational Biology, 14(4):e1006112, April 2018.

ABOPD: Antibody CDR Design via On-Policy Distillation RosettaAntibodyDesign(RAbD):Ageneralframework for computational antibody design.PLOS Computational Biology, 14(4):e1006112, April 2018

Reference 2

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:48.586181Z

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Observation 82ebb45f-4ed0-4390-8d59-422eb28be519 · outbound

This paper cites an unresolved cited work.

ABOPD: Antibody CDR Design via On-Policy Distillation Unresolved cited work

Reference 3

Resolution: verified exact; doi, observed 2026-08-01T14:18:36.433106Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation 89210f0b-5e70-41ed-a4ee-600013f578ec · outbound

This paper cites Antigen-specific antibody design andoptimizationwithdiffusion-basedgenerativemodelsforproteinstructures.

ABOPD: Antibody CDR Design via On-Policy Distillation Antigen-specific antibody design andoptimizationwithdiffusion-basedgenerativemodelsforproteinstructures

Reference 4

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:48.897798Z

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Observation 15041902-757c-491d-a38a-b6b809931419 · outbound

This paper cites End-to-end full-atom antibody design.

ABOPD: Antibody CDR Design via On-Policy Distillation End-to-end full-atom antibody design

Reference 5

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:49.098367Z

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Observation c40f500e-17a6-489f-b04b-1180e2648322 · outbound

This paper cites GeoAB:towardsrealisticantibodydesignandreliableaffinitymaturation.

ABOPD: Antibody CDR Design via On-Policy Distillation GeoAB:towardsrealisticantibodydesignandreliableaffinitymaturation

Reference 6

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:49.243399Z

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Observation bd7c32ec-21cc-4995-aa42-9999b6f53d9e · outbound

This paper cites AbDiffuser: full-atom generation of in vitro functioning antibodies.

ABOPD: Antibody CDR Design via On-Policy Distillation AbDiffuser: full-atom generation of in vitro functioning antibodies

Reference 7

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:49.366165Z

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Observation a2d9220a-4fe7-4e80-a9d8-39b0a8b14251 · outbound

This paper cites Greene, et al.

ABOPD: Antibody CDR Design via On-Policy Distillation Greene, et al

Reference 8

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:49.520018Z

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Observation bab9fa85-a2f4-4bac-bc17-edc888bddfd9 · outbound

This paper cites Antigen-specific antibody design via direct energy-based preference optimization.

ABOPD: Antibody CDR Design via On-Policy Distillation Antigen-specific antibody design via direct energy-based preference optimization

Reference 9

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:49.697495Z

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Observation 17060c45-8c39-4c5c-972a-8af363021d9e · outbound

This paper cites Input perturbation reduces exposure bias in diffusion models.

ABOPD: Antibody CDR Design via On-Policy Distillation Input perturbation reduces exposure bias in diffusion models

Reference 10

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:49.864647Z

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Observation 3a9de728-b122-45d6-8a09-525be1f393ac · outbound

This paper cites Shuai, Jeffrey A.

ABOPD: Antibody CDR Design via On-Policy Distillation Shuai, Jeffrey A

Reference 11

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:50.034956Z

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Observation c206cd97-371f-47d2-9bde-31f60f93838b · outbound

This paper cites Fleishman.

ABOPD: Antibody CDR Design via On-Policy Distillation Fleishman

Reference 12

Resolution: verified exact; doi, observed 2026-08-01T14:18:36.089555Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation ac85dd7c-49bc-440a-ac9c-21ec52bdc558 · outbound

This paper cites Conditional antibody design as 3D equivariant graph translation.

ABOPD: Antibody CDR Design via On-Policy Distillation Conditional antibody design as 3D equivariant graph translation

Reference 13

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:50.388735Z

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Observation a9a9db3b-4b1b-4d19-a004-7238431b67ff · outbound

This paper cites Jaakkola.

ABOPD: Antibody CDR Design via On-Policy Distillation Jaakkola

Reference 14

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:50.605514Z

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Observation cdd8733d-bf66-4d9f-a4d7-63a238e25326 · outbound

This paper cites Bennett, Joseph L.

ABOPD: Antibody CDR Design via On-Policy Distillation Bennett, Joseph L

Reference 15

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:50.784840Z

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Observation ae5d5dd9-b53e-40cb-994c-4757c67d48dd · outbound

This paper cites IgGM: A generative model for functional antibody and nanobody design.

ABOPD: Antibody CDR Design via On-Policy Distillation IgGM: A generative model for functional antibody and nanobody design

Reference 16

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:50.961537Z

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Observation 3f77813c-ae98-4d4e-8289-c3e41fad78c6 · outbound

This paper cites AbFlow: End-to-endparatope-centricantibodydesign by interaction enhanced flow matching.

ABOPD: Antibody CDR Design via On-Policy Distillation AbFlow: End-to-endparatope-centricantibodydesign by interaction enhanced flow matching

Reference 17

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:51.124210Z

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Unavailable: canonical work link unavailable.

Observation 3d85ebf7-fbc7-4ca7-9adc-a897fb500474 · outbound

This paper cites ODesign: A world model for biomolecular interaction design, 2025.

ABOPD: Antibody CDR Design via On-Policy Distillation ODesign: A world model for biomolecular interaction design, 2025

Reference 18

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:51.273454Z

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Observation ae0434a1-4314-400e-8a22-915e77c58e54 · outbound

This paper cites High-affinity protein binder design via flow matching and in silico maturation.bioRxiv, January 2026.

ABOPD: Antibody CDR Design via On-Policy Distillation High-affinity protein binder design via flow matching and in silico maturation.bioRxiv, January 2026

Reference 19

Resolution: verified exact; doi, observed 2026-08-01T14:18:35.954134Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation 248973fe-58cc-4957-acfd-e6af84a28bfd · outbound

This paper cites Pellock, Tamuka M.

ABOPD: Antibody CDR Design via On-Policy Distillation Pellock, Tamuka M

Reference 20

Resolution: verified exact; doi, observed 2026-08-01T14:18:35.713208Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation ce946126-df32-4552-8827-4a5f85bba8c1 · outbound

This paper cites Dauparas, I.

ABOPD: Antibody CDR Design via On-Policy Distillation Dauparas, I

Reference 21

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:51.693008Z

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Observation b4bf2dda-c3ae-4453-8f46-25da6b5080ab · outbound

This paper cites Watson, David Juergens, Nathaniel R.

ABOPD: Antibody CDR Design via On-Policy Distillation Watson, David Juergens, Nathaniel R

Reference 22

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:51.851801Z

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Observation dffc0c2b-19c6-4c8c-adc9-0e7ceee16a3f · outbound

This paper cites Ingraham, Max Baranov, Zak Costello, et al.

ABOPD: Antibody CDR Design via On-Policy Distillation Ingraham, Max Baranov, Zak Costello, et al

Reference 23

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.019316Z

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Observation 0c67e6b3-09c8-4d9b-a123-37596087e580 · outbound

This paper cites Trippe, Valentin De Bortoli, et al.

ABOPD: Antibody CDR Design via On-Policy Distillation Trippe, Valentin De Bortoli, et al

Reference 24

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.154730Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 4e08169f-7a78-4c36-8bd1-43fa9b99d7d9 · outbound

This paper cites FastproteinbackbonegenerationwithSE(3)flowmatching.

ABOPD: Antibody CDR Design via On-Policy Distillation FastproteinbackbonegenerationwithSE(3)flowmatching

Reference 25

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.239885Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation d580089e-9ddd-4b8c-a7a8-c9593371e91a · outbound

This paper cites SE(3)-stochastic flow matching for protein backbone generation.

ABOPD: Antibody CDR Design via On-Policy Distillation SE(3)-stochastic flow matching for protein backbone generation

Reference 26

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.320633Z

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Observation f4ec7e35-11c4-4c88-b749-ce15610e3fe9 · outbound

This paper cites On-policy distillation of language models: Learning from self-generated mistakes.

ABOPD: Antibody CDR Design via On-Policy Distillation On-policy distillation of language models: Learning from self-generated mistakes

Reference 27

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.433610Z

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Unavailable: canonical work link unavailable.

Observation ffde584d-748b-4c42-8aa6-7fd562a32702 · outbound

This paper cites D-OPSD: On-policy self-distillation for continuously tuning step-distilled diffusion models, 2026.

ABOPD: Antibody CDR Design via On-Policy Distillation D-OPSD: On-policy self-distillation for continuously tuning step-distilled diffusion models, 2026

Reference 28

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.507047Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 84bf09f7-22cb-4dd2-994e-ef1898d271aa · outbound

This paper cites Flow-OPD: On-policy distillation for flow matching models, 2026.

ABOPD: Antibody CDR Design via On-Policy Distillation Flow-OPD: On-policy distillation for flow matching models, 2026

Reference 29

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.600512Z

Source-reported events for the cited work

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Observation bbef8f1c-db26-43b5-9759-7065557bd094 · outbound

This paper cites DiffusionOPD:Aunifiedperspectiveofon-policydistillationindiffusion models, 2026.

ABOPD: Antibody CDR Design via On-Policy Distillation DiffusionOPD:Aunifiedperspectiveofon-policydistillationindiffusion models, 2026

Reference 30

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.676955Z

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Observation 7fc03af2-0b67-4c3a-9f40-796debfa31d5 · outbound

This paper cites Molecular de-novo design through deep reinforcement learning.Journal of Cheminformatics, 9(1):48, 2017.

ABOPD: Antibody CDR Design via On-Policy Distillation Molecular de-novo design through deep reinforcement learning.Journal of Cheminformatics, 9(1):48, 2017

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.792332Z

Source-reported events for the cited work

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Observation 78f7f407-1759-406a-8987-c0f72cb59c01 · outbound

This paper cites Graph convolutional policy network for goal-directed molecular graph generation.

ABOPD: Antibody CDR Design via On-Policy Distillation Graph convolutional policy network for goal-directed molecular graph generation

Reference 32

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:52.907300Z

Source-reported events for the cited work

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Observation 09553321-1e1a-40e4-8b9b-cd6a6a22be8f · outbound

This paper cites Zare, and Patrick Riley.

ABOPD: Antibody CDR Design via On-Policy Distillation Zare, and Patrick Riley

Reference 33

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:53.037227Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 01299bec-0b7b-410f-ad71-9ceb9e5172d9 · outbound

This paper cites MolAct: An agentic RL framework for molecular editing and property optimization, 2025.

ABOPD: Antibody CDR Design via On-Policy Distillation MolAct: An agentic RL framework for molecular editing and property optimization, 2025

Reference 34

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:53.180093Z

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Observation c8ddc9cd-e22c-4f48-9c41-e6c072b59b65 · outbound

This paper cites ProteinRL: Reinforcement learning with generative protein language models for property-directed sequence design.

ABOPD: Antibody CDR Design via On-Policy Distillation ProteinRL: Reinforcement learning with generative protein language models for property-directed sequence design

Reference 35

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:53.398571Z

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Observation 15f12c77-b64a-474b-a7be-727f96c9d739 · outbound

This paper cites Mark Kim, and Armen Mkrtchyan.

ABOPD: Antibody CDR Design via On-Policy Distillation Mark Kim, and Armen Mkrtchyan

Reference 36

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:53.558528Z

Source-reported events for the cited work

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Observation 70820568-9b23-41ac-864a-fac825acf214 · outbound

This paper cites Classifier-free diffusion guidance.

ABOPD: Antibody CDR Design via On-Policy Distillation Classifier-free diffusion guidance

Reference 37

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:53.660439Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 4cc56579-4714-4234-be50-01390d2ce3cc · outbound

This paper cites Learning using privileged information: similarity control and knowledge transfer.J.

ABOPD: Antibody CDR Design via On-Policy Distillation Learning using privileged information: similarity control and knowledge transfer.J

Reference 38

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:53.814715Z

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Observation 56fcfad0-b751-44cb-bf19-6e09d3013959 · outbound

This paper cites Unifying distillation and privileged information.

ABOPD: Antibody CDR Design via On-Policy Distillation Unifying distillation and privileged information

Reference 39

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:53.995923Z

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Observation 3e1d30c8-4709-4647-b7e9-2048136712b8 · outbound

This paper cites Denoising diffusion probabilistic models.

ABOPD: Antibody CDR Design via On-Policy Distillation Denoising diffusion probabilistic models

Reference 40

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:54.118244Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 958bb434-c00e-4697-9557-c852c0c16226 · outbound

This paper cites SAbDab: the structural antibody database.Nucleic Acids Research, 42(D1):D1140–D1146, 2014.

ABOPD: Antibody CDR Design via On-Policy Distillation SAbDab: the structural antibody database.Nucleic Acids Research, 42(D1):D1140–D1146, 2014

Reference 41

Resolution: verified exact; doi, observed 2026-08-01T14:18:35.363924Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation 85b06d5d-5f44-429c-9b2f-70580c2b0e0e · outbound

This paper cites Full-atompeptidedesignwithgeometriclatentdiffusion.

ABOPD: Antibody CDR Design via On-Policy Distillation Full-atompeptidedesignwithgeometriclatentdiffusion

Reference 42

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:54.346602Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation a21e0c2e-48bf-4489-ad90-5760e27f8b08 · outbound

This paper cites Proteo-R1: Reasoning foundation models for de novo protein design.

ABOPD: Antibody CDR Design via On-Policy Distillation Proteo-R1: Reasoning foundation models for de novo protein design

Reference 43

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:54.419274Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 06d909c3-67f1-493b-b225-d725860c4114 · outbound

This paper cites Lewis, et al.

ABOPD: Antibody CDR Design via On-Policy Distillation Lewis, et al

Reference 44

Resolution: verified exact; doi, observed 2026-08-01T14:18:35.088469Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation 18b940ad-bfbf-4f44-a7d1-65900e0eb715 · outbound

This paper cites Alford, Andrew Leaver-Fay, Jeliazko R.

ABOPD: Antibody CDR Design via On-Policy Distillation Alford, Andrew Leaver-Fay, Jeliazko R

Reference 45

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:54.786552Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 3f4c0b0a-96c4-4ba0-bc53-17dcd9017679 · outbound

This paper cites DockQ: A quality measure for protein-protein docking models.PLOS ONE, 11(8): e0161879, 2016.

ABOPD: Antibody CDR Design via On-Policy Distillation DockQ: A quality measure for protein-protein docking models.PLOS ONE, 11(8): e0161879, 2016

Reference 46

Resolution: verified exact; doi, observed 2026-08-01T14:18:34.793535Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation d691b5a0-3c71-47d4-a559-bd538e505e51 · outbound

This paper cites UniMoMo: Unified generative modeling of 3D molecules for de novo binder design.

ABOPD: Antibody CDR Design via On-Policy Distillation UniMoMo: Unified generative modeling of 3D molecules for de novo binder design

Reference 47

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:55.035775Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 6fdae50f-bdac-4673-8e5e-3a5b8ba0e48b · outbound

This paper cites Antibody design using a score-based diffusion model guided by evolutionary,physicalandgeometricconstraints.

ABOPD: Antibody CDR Design via On-Policy Distillation Antibody design using a score-based diffusion model guided by evolutionary,physicalandgeometricconstraints

Reference 48

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:55.148144Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 84c1d573-6c7f-4b7e-b8c7-c2ff469b4303 · outbound

This paper cites Ruffolo, Lee-Shin Chu, Sayan P.

ABOPD: Antibody CDR Design via On-Policy Distillation Ruffolo, Lee-Shin Chu, Sayan P

Reference 49

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:55.243202Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation f343b3bf-2014-4a69-bc99-60067b008721 · outbound

This paper cites The HDOCK server for integrated protein–protein docking.Nature Protocols, 15:1829–1852, 2020.

ABOPD: Antibody CDR Design via On-Policy Distillation The HDOCK server for integrated protein–protein docking.Nature Protocols, 15:1829–1852, 2020

Reference 50

Resolution: verified exact; doi, observed 2026-08-01T14:18:34.507636Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation bf6f087b-163b-4953-95ae-522784859bb5 · outbound

This paper cites Dynamic geometric equivariant network for full-atom antibodydesign.ProceedingsoftheAAAIConferenceonArtificialIntelligence,40(1):444–452,March2026.

ABOPD: Antibody CDR Design via On-Policy Distillation Dynamic geometric equivariant network for full-atom antibodydesign.ProceedingsoftheAAAIConferenceonArtificialIntelligence,40(1):444–452,March2026

Reference 51

Resolution: verified exact; doi, observed 2026-08-01T14:18:34.265621Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation 5e259ac2-0683-4f13-9e05-b4e2e964089b · outbound

This paper cites BoltzGen: Toward universal binder design.bioRxiv, November.

ABOPD: Antibody CDR Design via On-Policy Distillation BoltzGen: Toward universal binder design.bioRxiv, November

Reference 52

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:55.576223Z

Source-reported events for the cited work

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Observation 394472a0-d283-4e69-af74-3792f0bd6327 · outbound

This paper cites Guiding a diffusion model with a bad version of itself.

ABOPD: Antibody CDR Design via On-Policy Distillation Guiding a diffusion model with a bad version of itself

Reference 53

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:55.771610Z

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Observation 0f148cde-68d5-4fee-833d-8cc4ea2f52d2 · outbound

This paper cites Token perturbation guidance for diffusion models.

ABOPD: Antibody CDR Design via On-Policy Distillation Token perturbation guidance for diffusion models

Reference 54

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:55.883166Z

Source-reported events for the cited work

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Observation a5c2aeeb-f5e9-44fe-afcc-14631eb9e757 · outbound

This paper cites reference-derived.

ABOPD: Antibody CDR Design via On-Policy Distillation reference-derived

Reference 55

Resolution: verified exact; doi, observed 2026-08-01T14:18:33.984589Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-05T06:32:48.257954+00:00.

Observation 2e3f2e10-9373-4611-95ac-a2962eea795f · outbound

This paper cites URLhttp://dx.doi.org/10.1101/2025.11.20.689494.

ABOPD: Antibody CDR Design via On-Policy Distillation URLhttp://dx.doi.org/10.1101/2025.11.20.689494

Reference 2025

Resolution: unresolved; no resolver link, observed 2026-08-01T14:15:55.659547Z

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