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Paper Citation Record · LEDGER

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses

As of 23 August 2026, this Paper Citation Record lists 22 of 22 outbound references and 0 inbound Pith citation observations for arXiv:2607.28090.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2607.28090 v1

Coverage vector

measured 22 of 22 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-07-31T18:07:29.374374Z

measured 22 of 22 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-23T06:30:58.430688+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

22 of 22 outbound references displayed

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  • verified fuzzy0
  • unresolved21
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  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 5a65d57f-81de-422c-bcdc-4b504b398e77 · outbound

This paper cites Stark, Gabriele Gut, et al.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Stark, Gabriele Gut, et al

Reference 1

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no resolver link, observed 2026-07-31T18:07:27.470945Z

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Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-07-31T18:07:27.470945Z digest=sha256:63ce91f4b45682acc7f195989630ccdb2dfaa99871d6dc53a78423fc172f6588

Observation 463f88d8-9c55-43b8-bf29-2748b4c37c05 · outbound

This paper cites SCALE: Scalable conditional atlas-level endpoint transport for virtual cell perturbation prediction.arXiv preprint arXiv:2603.17380, 2026.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses SCALE: Scalable conditional atlas-level endpoint transport for virtual cell perturbation prediction.arXiv preprint arXiv:2603.17380, 2026

Reference 2

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no resolver link, observed 2026-07-31T18:07:27.530344Z

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source=pdf_text observed=2026-07-31T18:07:27.530344Z digest=sha256:d52ef537c1d3405b6d7cbffbdfda2ed25c6984fef1ae91a9bc398789bbc653cd

Observation 69f6501a-7476-4b33-a342-e50d84b63786 · outbound

This paper cites an unresolved cited work.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Unresolved cited work

Reference 3

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source=pdf_text observed=2026-07-31T18:07:27.605957Z digest=sha256:51bac23573dd43b55f13f35ddec1fa862957b60c7679a4af24a9785b83ad6822

Observation 4542781b-b366-411e-a137-c4c9194ad4f6 · outbound

This paper cites Towards generalizable single-cell perturbation modeling via the Conditional Monge Gap.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Towards generalizable single-cell perturbation modeling via the Conditional Monge Gap

Reference 4

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source=pdf_text observed=2026-07-31T18:07:27.682035Z digest=sha256:5118b1d8610aa3428f019fd57bcfb9dccc95ee7309f80de956faaf7d64730a55

Observation de4430d2-49be-4d45-b8d1-f54e61e8f251 · outbound

This paper cites Frangieh, Johannes C.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Frangieh, Johannes C

Reference 5

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source=pdf_text observed=2026-07-31T18:07:27.750489Z digest=sha256:6e516409360c842263d2609197e6d5a558fd94175d9593736d32cb24b5233cab

Observation a2043d12-5a8b-4dc2-97c0-546c27cd1cbc · outbound

This paper cites STRAND: Sequence-conditioned transport for single- cell perturbations.arXiv preprint arXiv:2602.10156, 2026.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses STRAND: Sequence-conditioned transport for single- cell perturbations.arXiv preprint arXiv:2602.10156, 2026

Reference 6

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source=pdf_text observed=2026-07-31T18:07:27.809302Z digest=sha256:8b619680c1c669d8b281bdc294df545f29ff97097b3d1156ad52ab3eb57b63b3

Observation 0a9cb4ab-7488-4f39-bd19-76a4f694ef0f · outbound

This paper cites Domain-adversarial training of neural networks.Journal of Machine Learning Research, 17(59):1–35, 2016.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Domain-adversarial training of neural networks.Journal of Machine Learning Research, 17(59):1–35, 2016

Reference 7

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source=pdf_text observed=2026-07-31T18:07:27.873459Z digest=sha256:abebe0df0ce9a711d7cac84ac11e80be36235fb6ae0a8e099931f04c507fbc72

Observation 0cdac710-a6bd-424d-836e-bd4b6ab504f2 · outbound

This paper cites OCOO-T : A Simple and Scalable Virtual Cell Model for Transcriptional Perturbation Response Prediction.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses OCOO-T : A Simple and Scalable Virtual Cell Model for Transcriptional Perturbation Response Prediction

Reference 8

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no resolver link, observed 2026-07-31T18:07:27.966431Z

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source=pdf_text observed=2026-07-31T18:07:27.966431Z digest=sha256:c7738c4f34d20cbfba488550e428902cef8be6bfa6df82e7b7e760f9cc0567f2

Observation f87da6c6-097f-4b66-b355-9aea3663f684 · outbound

This paper cites Systematic reconstruction of molecular pathway signatures using scalable single-cell perturbation screens.Nature Cell Biology, 27:505–517, 2025.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Systematic reconstruction of molecular pathway signatures using scalable single-cell perturbation screens.Nature Cell Biology, 27:505–517, 2025

Reference 9

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verified exact
doi, observed 2026-07-31T18:10:56.299167Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-23T06:30:58.430688+00:00.

source=pdf_text observed=2026-07-31T18:07:28.005364Z digest=sha256:1dc323e55c66abd93bb0f4a1874be16d8f82beaebda9b233791e11c2207cd58a

Observation 66ef3ce3-fbe7-46dd-9f65-29a62417635b · outbound

This paper cites Brendan McMahan, Brendan Avent, Aurélien Bellet, Mehdi Bennis, Ar- jun Nitin Bhagoji, Keith Bonawitz, Zachary Charles, Graham Cormode, Rachel Cummings, et al.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Brendan McMahan, Brendan Avent, Aurélien Bellet, Mehdi Bennis, Ar- jun Nitin Bhagoji, Keith Bonawitz, Zachary Charles, Graham Cormode, Rachel Cummings, et al

Reference 10

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source=pdf_text observed=2026-07-31T18:07:28.065450Z digest=sha256:b9470349a23e657ba411cca1291fa9f0c8388679fb6877f046abc4d3a114fd3f

Observation aea6f387-1e72-4afb-a5f0-418e8b0142fe · outbound

This paper cites FedBN: Federated learning on non-IID features via local batch normalization.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses FedBN: Federated learning on non-IID features via local batch normalization

Reference 11

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source=pdf_text observed=2026-07-31T18:07:28.153085Z digest=sha256:109a6ceb4cfa3ffcfecdb97441405ab509c59d9ed4dbbc07dc09f2dba6776bbe

Observation b832e4cc-2f5b-4495-9ced-72b68967e422 · outbound

This paper cites Alexander Wolf, and Fabian J.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Alexander Wolf, and Fabian J

Reference 12

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source=pdf_text observed=2026-07-31T18:07:28.289948Z digest=sha256:77bbb18c475d170320de3b5c49617462cbaf08f95e663dc96ccd4917f02188ea

Observation c0e0e34e-5707-4397-9c8b-fd4d01502ece · outbound

This paper cites Predicting cellular responses to complex perturbations in high-throughput screens.Molecular Systems Biology, 2023.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Predicting cellular responses to complex perturbations in high-throughput screens.Molecular Systems Biology, 2023

Reference 13

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source=pdf_text observed=2026-07-31T18:07:28.399872Z digest=sha256:7339addce4947ab0cebfd0aedef9b9cdb289c818f18dfa8c77b4806077e2b296

Observation 6f543e7f-1aff-486b-af42-a682b71a19e8 · outbound

This paper cites Communication-efficient learning of deep networks from decentralized data.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Communication-efficient learning of deep networks from decentralized data

Reference 14

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source=pdf_text observed=2026-07-31T18:07:28.502312Z digest=sha256:7657868d8b57963a49ca460c98d42150f83974be15f1702add0c055fe4b3d0c0

Observation 36c5965b-a6de-4274-be13-bdf747a53621 · outbound

This paper cites Replogle, Reuben A.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Replogle, Reuben A

Reference 15

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source=pdf_text observed=2026-07-31T18:07:28.605749Z digest=sha256:f3125c9c7d0fcc595443687a43562adfc746a264b90d8f08f3e5dd6a425287f4

Observation 0aad0911-5a2e-497f-94c0-cbf5eeca2cfd · outbound

This paper cites Predicting transcriptional outcomes of novel multigene perturbations with GEARS.Nature Biotechnology, 2023.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Predicting transcriptional outcomes of novel multigene perturbations with GEARS.Nature Biotechnology, 2023

Reference 16

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source=pdf_text observed=2026-07-31T18:07:28.765301Z digest=sha256:a5473415cb15e8487e5091a31daff66f033630204d2174049c139fa79bd77dc4

Observation b7a95693-5b08-4d44-a660-a2b444dcb943 · outbound

This paper cites Federated optimization in heterogeneous networks.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Federated optimization in heterogeneous networks

Reference 17

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source=pdf_text observed=2026-07-31T18:07:28.883074Z digest=sha256:e2323307d86a5b6fc8abdfad63a21fababa4e88186155de185b7801c8ddd969a

Observation 45097dd3-6aef-40a7-9aac-b97db074f11e · outbound

This paper cites Deep CORAL: Correlation alignment for deep domain adaptation.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Deep CORAL: Correlation alignment for deep domain adaptation

Reference 18

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source=pdf_text observed=2026-07-31T18:07:28.980528Z digest=sha256:2845bf03ad9ec0d18e6b5bf3c0678041c1ad340589c34c22d008ed7d5badbb28

Observation eafe1026-136e-4606-8037-63624afa32b4 · outbound

This paper cites Benchmarking algorithms for generalizable single-cell perturbation response prediction.Nature Methods, 23(2):451–464, 2026.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Benchmarking algorithms for generalizable single-cell perturbation response prediction.Nature Methods, 23(2):451–464, 2026

Reference 19

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source=pdf_text observed=2026-07-31T18:07:29.098821Z digest=sha256:5f4b628ccdc12eeda750719a31d49d92daa819f35286286f452d1cdcd4ea54a3

Observation f33d0915-a2a5-4147-bb51-cdb708a504cc · outbound

This paper cites an unresolved cited work.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Unresolved cited work

Reference 20

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source=pdf_text observed=2026-07-31T18:07:29.196766Z digest=sha256:f9e061b2756b825e48338929e8da480b1890ae6bc88648bdf2aa559851d9b045

Observation b28ba47f-24f3-4bbe-bddc-a1ed9a0bab58 · outbound

This paper cites Schmon, Marcel Nassar, et al.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses Schmon, Marcel Nassar, et al

Reference 21

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source=pdf_text observed=2026-07-31T18:07:29.286433Z digest=sha256:5fa08bbb623949d8c2b1496952ef46ed5581b691170206516b51cbf660b29f26

Observation 174c652c-6fa1-4326-a54c-a9707722f61e · outbound

This paper cites scdfm: Distributional flow matching model for robust single-cell perturbation prediction.arXiv preprint arXiv:2602.07103, 2026.

PerturbMap: Cross-Context Transfer of Single-Cell Perturbation Responses scdfm: Distributional flow matching model for robust single-cell perturbation prediction.arXiv preprint arXiv:2602.07103, 2026

Reference 22

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source=pdf_text observed=2026-07-31T18:07:29.374374Z digest=sha256:059c88ebf82cfbc201f2edb4d066c800d4e353124548e4e223e2086cba2976b5

Pith citing papers

No inbound Pith citation observations are available.