Typed states for the displayed outbound observations.
Source: paper_references, paper_reference_links, observed 2026-08-16T05:28:32.476924Z
Paper Citation Record · LEDGER
A 3D pocket-aware and affinity-guided diffusion model for lead optimization
As of 17 August 2026, this Paper Citation Record lists 52 of 52 outbound references and 1 inbound Pith citation observation for arXiv:2504.21065.
A citation records a reference. It does not transfer a finding from one paper to another.
Coverage vector
One-hop event checks from named stored sources.
Source: scholarly_work_events, retraction_status_cache, observed 2026-08-17T06:30:58.91139+00:00
Pith citing papers itemized under the disclosed page cap.
Source: paper_references, paper_reference_links, observed 2026-08-09T12:29:03.726490Z
A source-named dated measurement, never combined with another source.
Source: pith, observed 2026-08-09T12:29:03.792353Z
Reference resolution
52 of 52 outbound references displayed
- verified exact10
- verified fuzzy20
- unresolved22
- parse uncertain0
- malformed identifier0
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External citation measurements
No source-named external measurement is stored.
Outbound references
Observation a2a65412-deef-435a-acf2-e77c6fe01368 · outbound
This paper cites Coma: efficient structure-constrained molecular generation using contractive and margin losses.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Coma: efficient structure-constrained molecular generation using contractive and margin losses
Reference 1
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation c09f1e8d-12c7-452b-ad31-47aeec1feb57 · outbound
This paper cites Molecular optimization by capturing chemist's intuition using deep neural networks.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Molecular optimization by capturing chemist's intuition using deep neural networks
Reference 2
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-16T05:28:35.434827Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 3b3fb9e3-f6c8-4903-a48f-d2560e27f069 · outbound
This paper cites Efficient multi-objective molecular optimization in a continuous latent space.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Efficient multi-objective molecular optimization in a continuous latent space
Reference 3
- Resolution
- verified fuzzy
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation e2766977-50f5-474d-9dbf-89b0884ff0c4 · outbound
This paper cites Min, Srinivasan Parthasarathy, and Xia Ning.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Min, Srinivasan Parthasarathy, and Xia Ning
Reference 4
- Resolution
- verified fuzzy
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 333a3bcf-907c-4098-b01a-67e70f5ed9be · outbound
This paper cites Molecular de-novo design through deep reinforcement learning.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Molecular de-novo design through deep reinforcement learning
Reference 5
- Resolution
- verified fuzzy
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 56df9239-3f43-4beb-aa60-569b7b99d3dd · outbound
This paper cites Fragrep: A web server for structure-based drug design by fragment replacement.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Fragrep: A web server for structure-based drug design by fragment replacement
Reference 6
- Resolution
- verified fuzzy
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 90f277dc-a4b8-4214-ad4a-dd24fb294742 · outbound
This paper cites de Souza Neto et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization de Souza Neto et al
Reference 7
- Resolution
- verified fuzzy
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation aa098419-b32c-4716-9266-c1265dcbf35f · outbound
This paper cites Target-focused library design by pocket-applied computer vision and fragment deep generative linking.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Target-focused library design by pocket-applied computer vision and fragment deep generative linking
Reference 8
- Resolution
- verified fuzzy
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation a70ca7d2-77d6-4ab5-9f24-30896ca7a30f · outbound
This paper cites Bos et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Bos et al
Reference 9
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation e6dd20f8-bba2-4f15-bf92-78cefeeb4f06 · outbound
This paper cites Hoffman et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Hoffman et al
Reference 10
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 075977cd-36f5-43cc-8242-4523c8613a5b · outbound
This paper cites Equivariant 3d-conditional diffusion model for molecular linker design.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Equivariant 3d-conditional diffusion model for molecular linker design
Reference 11
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation a81d0007-0a78-440b-be69-60713df2c774 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 12
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation c849eb34-02de-428f-a985-3394a7e77907 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 13
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 4e91d86c-f3fa-4f74-b875-25f06890fa11 · outbound
This paper cites Zhavoronkov, Y.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Zhavoronkov, Y
Reference 14
- Resolution
- unresolved
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 84b04963-606b-4404-a822-1607344736e7 · outbound
This paper cites Zhang et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Zhang et al
Reference 15
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation ded21131-7023-4a86-8cf7-38b3d0d9c859 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 16
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 424b7d25-5eb0-48c1-adff-452b0cdb5d54 · outbound
This paper cites Deep lead optimization: Leveraging generative ai for structural modification.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Deep lead optimization: Leveraging generative ai for structural modification
Reference 17
- Resolution
- unresolved
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 430d5901-b29d-4d92-835c-27f44a3e0c08 · outbound
This paper cites Zheng et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Zheng et al
Reference 18
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation c64244d9-1118-4d79-a1a9-d3c82eccb452 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 19
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 5e046de6-d886-468a-bd89-faa545b12cb2 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 20
- Resolution
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Source-reported events for the cited work
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Observation bad91595-70f6-487b-a77d-85dfa3c35fc6 · outbound
This paper cites Imrie, T.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Imrie, T
Reference 21
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 96b559ef-8bc6-4421-8038-ca24d1d6a263 · outbound
This paper cites Skalic et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Skalic et al
Reference 22
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 25567d0f-390e-4ded-a936-a0d8642f201e · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 23
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 3ea7e014-b5e3-4b2f-a981-8c61a837c40e · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 24
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation d43106ae-0133-4fa0-884a-f3c9d336411a · outbound
This paper cites Green, D.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Green, D
Reference 25
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation ad04473b-3b99-4000-957a-a8fbb15f47ea · outbound
This paper cites Green and J.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Green and J
Reference 26
- Resolution
- verified exact
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 8a4d185c-96f5-4dff-9c16-5c010aefef26 · outbound
This paper cites Ragoza, T.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Ragoza, T
Reference 27
- Resolution
- verified exact
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation e741d1cd-0388-4790-953a-d1fba56b8899 · outbound
This paper cites Generating 3D Molecular Structures Conditional on a Receptor Binding Site with Deep Generative Models.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Generating 3D Molecular Structures Conditional on a Receptor Binding Site with Deep Generative Models
Reference 28
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation e2938e18-d596-42cc-a60e-94def0654ee7 · outbound
This paper cites Generating 3D Molecules for Target Protein Binding.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Generating 3D Molecules for Target Protein Binding
Reference 29
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 4a12537e-5ad7-4730-9ec7-309cf8b7d8c9 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 30
- Resolution
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Source-reported events for the cited work
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Observation e86b9962-0ffc-4841-af78-1c15c74c238d · outbound
This paper cites DiffBP: Generative Diffusion of 3D Molecules for Target Protein Binding.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization DiffBP: Generative Diffusion of 3D Molecules for Target Protein Binding
Reference 31
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 16606fa6-5609-4a42-a78f-6ffc31eb7fcf · outbound
This paper cites Schneuing et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Schneuing et al
Reference 32
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 19cf4dfe-2349-4b93-aba8-6e8a8fbf944c · outbound
This paper cites 3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization 3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction
Reference 33
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation a61d488e-b2dd-4de2-90ab-9df723dc296e · outbound
This paper cites Huang et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Huang et al
Reference 34
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 296fd5ba-b9f3-4633-846b-e8b8e0750874 · outbound
This paper cites Wu et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Wu et al
Reference 35
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation e916e585-3b2b-4ef4-8d14-09c41ee8c52c · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 36
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 0180178b-7a3d-4671-8b59-4d25b73af7ea · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 37
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation c1e3371f-934b-4365-b777-3a20602350f5 · outbound
This paper cites DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design
Reference 38
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation c01ed0fd-c991-4b3b-b95e-e6a128633b1d · outbound
This paper cites Lu et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Lu et al
Reference 39
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation f1b80e7d-cc68-4996-bfda-d1dd8cb87227 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 40
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 8d162ce4-02aa-4915-8a6c-c9e4c3b196c6 · outbound
This paper cites MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation
Reference 41
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation a408c9a3-6c19-4ce9-81a3-9c552bdeab66 · outbound
This paper cites Kingma, T.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Kingma, T
Reference 42
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation c74913fc-72bb-4155-b60a-6c00a6575b59 · outbound
This paper cites Score-Based Generative Modeling through Stochastic Differential Equations.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Score-Based Generative Modeling through Stochastic Differential Equations
Reference 43
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 8c652f7a-7fda-482f-a673-5af573b19533 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 44
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation a9e75476-a9cc-47da-ac5b-7635c56af62a · outbound
This paper cites Guan et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Guan et al
Reference 45
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation ae3bb44a-bb63-49ac-9454-c49aabda454a · outbound
This paper cites Yang et al.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Yang et al
Reference 46
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation eb8a051e-0615-4ea3-ba07-0172e1cdffaf · outbound
This paper cites Directional Message Passing for Molecular Graphs.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Directional Message Passing for Molecular Graphs
Reference 47
- Resolution
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Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 0734c174-64fa-49db-9107-b76d09fc2c4e · outbound
This paper cites Dhariwal and A.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Dhariwal and A
Reference 48
- Resolution
- verified fuzzy
- raw_fallback, observed 2026-08-16T05:28:34.059334Z
Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 2599fd50-748c-411c-9be9-364a1c68d3c4 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 49
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 64bf8123-e94d-4bbc-8ccb-7b39af676e05 · outbound
This paper cites Ertl and A.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Ertl and A
Reference 50
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 561de566-4f89-4174-b425-0b3d29d07755 · outbound
This paper cites Sangster.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Sangster
Reference 51
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Observation 10969126-38a0-4f3b-b47a-3988bfb9ecb3 · outbound
This paper cites an unresolved cited work.
A 3D pocket-aware and affinity-guided diffusion model for lead optimization Unresolved cited work
Reference 52
- Resolution
- unresolved
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.
Pith citing papers
Observation 03ac4cb8-5811-44a1-93e6-4742343cdfdc · inbound
RAPID-Net: Accurate Pocket Identification for Binding-Site-Agnostic Docking cites this paper.
RAPID-Net: Accurate Pocket Identification for Binding-Site-Agnostic Docking A 3D pocket-aware and affinity-guided diffusion model for lead optimization
Reference 123
- Resolution
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Source-reported events for the cited work
No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.