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Paper Citation Record · LEDGER

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates

As of 8 August 2026, this Paper Citation Record lists 96 of 96 outbound references and 1 inbound Pith citation observation for arXiv:2506.04219.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2506.04219 v2

Coverage vector

measured 96 of 96 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-07T10:52:49.295978Z

measured 97 of 97 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-08T06:32:00.761636+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-04T08:55:58.122334Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

96 of 96 outbound references displayed

  • verified exact0
  • verified fuzzy42
  • unresolved50
  • parse uncertain4
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 65d3323d-e73f-4fa0-8abb-39c84a37adc5 · outbound

This paper cites These blood cells originate from hematopoietic stem and progenitor cells (HSPCs), which have the capacity to differentiate into many blood cell fates.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates These blood cells originate from hematopoietic stem and progenitor cells (HSPCs), which have the capacity to differentiate into many blood cell fates

Reference 1

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.639583Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.639583Z digest=sha256:9ad61daa860afbbbdefa45a4ecef31aae57026c065e143a9e779981b6d4b633d

Observation dc51c46a-5c36-42e5-bb52-e03356a804b6 · outbound

This paper cites Different transitions between these types have been established in homeostasis, injury, and transplant [54].

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Different transitions between these types have been established in homeostasis, injury, and transplant [54]

Reference 2

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.705296Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.705296Z digest=sha256:28b51452dc1df16dbadab31b610bdecf17c3aa5d8511bb1603688a30674058bb

Observation fc06b7e5-b500-4893-8c8d-2f305ec7ff93 · outbound

This paper cites Wolpert, C.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Wolpert, C

Reference 3

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.845807Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.845807Z digest=sha256:27cb09a76c8389179ce1b3b3f1168334b79acc1e3ee2775dc25d385be1e46838

Observation a835c2ca-9733-4a58-aa5c-53afd60a7459 · outbound

This paper cites Debat and P.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Debat and P

Reference 4

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.870583Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.870583Z digest=sha256:286ebc78aa652ab7ccaaa99e022e882fecd886906c25fe9684d1fe9e6ca2f3a7

Observation a9032c42-7b27-4975-9404-bba3fbaa80a9 · outbound

This paper cites Wagner,Robustness and evolvability in living systems(Princeton university press, 2013).

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Wagner,Robustness and evolvability in living systems(Princeton university press, 2013)

Reference 5

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.935486Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.935486Z digest=sha256:7f0e9ad1843b8f09a17cf056b10b52b982660eba0a927db3f3d1f6632c4afae7

Observation 01f04d5a-583f-48f1-be57-ffba64bfd0ad · outbound

This paper cites Takahashi and S.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Takahashi and S

Reference 6

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.939818Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.939818Z digest=sha256:37d7f5c8d5ce8824b6f09bdc1c290e380b3eeda92b2f707ca5a29b26c7c831b1

Observation 577df5ac-3253-4c16-a43c-3a2db65cdd3b · outbound

This paper cites Takahashi and S.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Takahashi and S

Reference 7

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.943777Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.943777Z digest=sha256:83c0a53e7bd45a163752c66110f01b5ef880b892f7bdfe2145e5c2f5b4b9ec67

Observation f4b9dd5b-1733-4dbd-8ee6-8735946e74be · outbound

This paper cites Srivastava and N.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Srivastava and N

Reference 8

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.948242Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.948242Z digest=sha256:00991be1ae0ce16b81316b61a6901c3ab963b4485d45a135d032ec7200c785bc

Observation 9b3f670c-7b98-49a4-81f0-31a0b2d701dc · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 9

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.952713Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.952713Z digest=sha256:457571a01603174bd881ad9253f7b68ad0a6845391f9030df33f7ececf4dd5f1

Observation 1c1373ec-b559-4f38-bd43-4d1053cc3b48 · outbound

This paper cites Trapnell, Genome research25, 1491 (2015).

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Trapnell, Genome research25, 1491 (2015)

Reference 10

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.956822Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.956822Z digest=sha256:9a22f44ab716c0bbd7cf712fdb63826f1301f10c3ffb8c51770af45249d5f619

Observation 9ad7063b-7d61-43fe-be37-ffc0dc71f643 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 11

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.960739Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.960739Z digest=sha256:4c0de0e2e6cd552cbdc15fcf5acc6016a738ec58a8b4e28c5c639c81a910d1bf

Observation 9ad7fbef-3b74-432c-bba5-26973000794e · outbound

This paper cites Svensson, R.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Svensson, R

Reference 12

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.964922Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.964922Z digest=sha256:099101db8b36f8f27f25c578f7eff906fe748902964db7e211073938889a11e2

Observation 65b68f9a-d47d-49d6-b514-e2d8e74800f2 · outbound

This paper cites Jones, J.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Jones, J

Reference 13

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.968406Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.968406Z digest=sha256:cccf792db662afdeb1c5ee136cda6b9850c1d08f1e4ab0a8a00e19ccfac84dac

Observation 86377995-4bd3-43f4-92dc-072e0165ff9c · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 14

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.972186Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.972186Z digest=sha256:0d7874e8fa8ccf35813b1b8f833ec289caf66b36cd9530909b2d2f9249cc5053

Observation eede122a-e5a9-4782-880a-6c4c34e79999 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 15

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.976075Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.976075Z digest=sha256:3362b33e6d496daf9778632b05d096c97ce561ad3b64138475497b27e3eb9d31

Observation 23e082fa-849a-4b38-94f2-96dda7aa099f · outbound

This paper cites L¨ ahnemann, J.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates L¨ ahnemann, J

Reference 16

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.979883Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.979883Z digest=sha256:47d51bf8faa6089c75d702dbab7179b8b9bafd7b2b8592a530cbcad29a861c3e

Observation 5eae037d-8278-42a3-bb76-e4061400f502 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 17

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.983783Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.983783Z digest=sha256:a827ab4e411f956f58c95e400ca575a5e041a800fd6bf5c8ae00f43227058a72

Observation 248d5158-ff4a-40a8-95a9-b58fe70a5467 · outbound

This paper cites Huang, Bioessays34, 149 (2012).

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Huang, Bioessays34, 149 (2012)

Reference 18

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.359740Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:48.987991Z digest=sha256:10582895b0489e5d14b16e3f23f22f23b14403ac9fd83bc9b5928247f33e1cce

Observation ab774264-c910-4962-bb9a-00ca2885e496 · outbound

This paper cites Thom,Structural stability and morphogenesis(CRC press, 2018).

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Thom,Structural stability and morphogenesis(CRC press, 2018)

Reference 19

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.346239Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

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Observation cc022b7b-e316-45f0-9a5a-d3b3a416240a · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 20

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:50.332426Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

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Observation 1b360054-1e9c-460a-9bee-50e0c8bb34d2 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 21

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:48.998971Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:48.998971Z digest=sha256:4ed4cfa1407935f0b5c41e5c59534a7d0acf22fb06e4b7c0ca0db8dc0892d3a2

Observation 469409b5-1de3-4025-946c-3c128343efc5 · outbound

This paper cites Moris, C.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Moris, C

Reference 22

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.308455Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

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Observation e5b63d8f-3b1b-4ec8-91cb-2c564ea48931 · outbound

This paper cites S´ aez, R.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates S´ aez, R

Reference 23

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.295353Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.006454Z digest=sha256:1a311bb4ff82fab3e1a20bfccba6fe3a360daa96dca0aabd6de81bc2eaa44bf6

Observation 874f724f-5f5e-409a-a90c-37fad3a15cd6 · outbound

This paper cites Wang, Journal of Biological Physics48, 1 (2022).

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Wang, Journal of Biological Physics48, 1 (2022)

Reference 24

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.281987Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.010011Z digest=sha256:0adb9b47359e1d6f199fe3ef22ef7dfa9131e0ecc858a0d8b46d274d9c82fb89

Observation db2b814c-1895-4a7c-ac10-5821cf2cbda7 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 25

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:50.269631Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

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Observation a2cde4de-d7bb-493a-b62e-760aee807662 · outbound

This paper cites Raju and E.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Raju and E

Reference 26

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:49.017862Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:49.017862Z digest=sha256:02e911b4dfc3144c9390a6b316f607c7e0835e5f2fa9a357cbfeb16c531c76ff

Observation 4c68535f-5f3a-4402-aae7-b3bbf1a89d9d · outbound

This paper cites Camacho-Aguilar, A.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Camacho-Aguilar, A

Reference 27

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.256351Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.021682Z digest=sha256:2634b8e554aeb1b32131d4c643a0f07c2285f2d7f6df9233c7e1548566fa3a78

Observation 8ec51f78-ebfb-41da-9745-51b72a86fca1 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 28

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:50.243963Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.025616Z digest=sha256:567f9065fc227bc54eda20200479d00ff4e88601a8347f978aa1299a7a67e2be

Observation acba2358-328e-49a5-a1db-af164dc54d04 · outbound

This paper cites Mochulska and P.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Mochulska and P

Reference 29

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.230817Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.029458Z digest=sha256:d98019ca791e3b5ab7ebe22eab967510fbbeec213541e15aeb3815a32817450b

Observation affdc702-0796-417c-9d30-576dffae926d · outbound

This paper cites S´ aez, J.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates S´ aez, J

Reference 30

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.216384Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.033367Z digest=sha256:7cb2f6cc3476e998a07661412a4074b3bce7d5469f7b041dbe1c2e20e8f8b9b2

Observation 9aa9e008-cc8e-4fe5-8093-35b7162ef2bc · outbound

This paper cites Yampolskaya, M.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Yampolskaya, M

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.203613Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.037203Z digest=sha256:3b11ce26a5327659b59c9f9ccaa81ea6b3ced4f386b9c8806696e64fc8b3ce8e

Observation 1f7f3686-1047-4da2-90c0-4d4f439459f7 · outbound

This paper cites Grishechkin, A.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Grishechkin, A

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.190584Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.040837Z digest=sha256:ef3815564741be39dca4dca6ee23c94530b18a4baa7b79904f3c4f2b2c06b14b

Observation 0077adfb-3d85-4841-ba56-b99d261fa033 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 33

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:50.177327Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.044830Z digest=sha256:dc463731e6d75110f5ad71adf5fe0351558123e963351484ad93119c9f3a8aea

Observation 78ddb2ce-7308-4d06-a627-b01268e252c4 · outbound

This paper cites Olsson, M.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Olsson, M

Reference 34

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.164058Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.048781Z digest=sha256:2c169ae23bea9cf4736292d1b3a4da92755efa1d94ccd29dd6f630e4fa428d68

Observation f2d3b166-e34a-4023-b994-44db9961966d · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 35

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:49.052671Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:49.052671Z digest=sha256:67a008469301ebab84ba09db664ac0e6136cbdbee5e0fd11fd87f87af4710b87

Observation f58522ff-7b9d-439f-8441-c797367e3d51 · outbound

This paper cites Krotov and J.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Krotov and J

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.140690Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.056732Z digest=sha256:4da9c33a02800ebf4a17b37ac4c209dfe9e71b72287aa1cdb9a431824966be2b

Observation 21cf3bff-54e3-4c7c-9e15-59dcacdea406 · outbound

This paper cites Yampolskaya and P.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Yampolskaya and P

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.127965Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.060467Z digest=sha256:36dd6d68aef8a1c6a6a7a1d13c424a75b335e138d1546478bb55db62efdc86d5

Observation 79ef7d97-1f0d-4f77-8558-7173c547c4e5 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 38

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:50.115132Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.064184Z digest=sha256:15d2fe0cb6c867fc2f384e72236b4f4699b5ad078c1a25df9f49a5b46c7efa69

Observation 1f8067c4-afae-41b7-9a92-62f787a143fb · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 39

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:50.102273Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.068047Z digest=sha256:b59cef18e058c9f21498e0c30fcc22564d43aae2ed9127258bbbe455e06c4f91

Observation c3d3801a-23ab-404b-92d1-709639f59866 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 40

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:50.089217Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.071908Z digest=sha256:2ee7d2bd03201695e239fafde01c122ef2dd76311712718782a9f3b919efabc4

Observation 4ae41d4f-78bc-40b4-a6b4-ffcf5ffaff20 · outbound

This paper cites Guo and J.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Guo and J

Reference 41

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.076205Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.076206Z digest=sha256:97387da4b43f498c566288b181e3ce25fbab76bb6dc2e2ace989363eb28e2eb7

Observation e0108877-cab6-47b0-a8b2-7ac8739ce72a · outbound

This paper cites Ikonomou, M.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Ikonomou, M

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.064102Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.080173Z digest=sha256:170ea9d47ae74f077b6050f82495b0942c3a6185a2ab192e1a1f0b6427a0b521

Observation 99df218b-e2bf-4076-b183-fbba5a18f178 · outbound

This paper cites Smart and A.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Smart and A

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.051564Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.084094Z digest=sha256:d46e7036c0d7594a7a1eac8466f386c7607e86e8ea46e8f58192864182aa6898

Observation 4720fb82-e2d0-4c26-bb46-8740a27e7263 · outbound

This paper cites Karin, Development151, dev202997 (2024).

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Karin, Development151, dev202997 (2024)

Reference 44

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.038894Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.088433Z digest=sha256:9aca5f649458e9074e5ca0c53ea3dca80a8f6815cd613abaf30a8fbd86ad10e4

Observation b58636c8-b2d6-4a37-b55b-37facbd4e9c3 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 45

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:50.025848Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.092355Z digest=sha256:4bdeffc68468643edca79e45781c716c46cf8ceb6afeb74df6d6eade16161a58

Observation 4fef2658-89e8-4d49-a305-051059af7de6 · outbound

This paper cites Souza and P.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Souza and P

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:50.013084Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.096787Z digest=sha256:153dcb3abcf5cd597c21b494b482666212dd1474a759161dca429d2ceaa5c5a7

Observation 1b9f0263-6c5e-443a-a5bc-b41cfa2faa01 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 47

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:50.000066Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.100688Z digest=sha256:9dac30e67920c9715603ff0850a3528710841b158d08f8b6890e6ae5212f2e26

Observation 9e48a014-26c9-4e21-afcb-f488b929b577 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 48

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.987627Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.104926Z digest=sha256:ea67609d4189b4a5e3f7f172311ddbfab906f076df8d51fdc7094d101b730f7e

Observation c057015c-47d8-4d7b-903d-65ff6c3e1c5a · outbound

This paper cites Yampolskaya and P.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Yampolskaya and P

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.975187Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.113224Z digest=sha256:f00e5730643b82a4207ab4c112e6111c46f51a87facbef9edd66808a35f3d676

Observation 407827b1-16fb-41ca-9147-4a6474389414 · outbound

This paper cites Kanter and H.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Kanter and H

Reference 51

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.963212Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.117171Z digest=sha256:977a82a13e14aea29840fae53699f978bdbf6ce8f6f563227854e969c7282557

Observation 68a61f58-d793-401e-91e6-17f459febb18 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 52

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.950631Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.120955Z digest=sha256:af80ec67bd81d2ce704b836018d9d1be73de745d839394e891cdc53766eb555e

Observation d799fe5d-f4dd-4c20-a79a-020382e870e9 · outbound

This paper cites Bialek,Biophysics: searching for principles(Princeton University Press, 2012).

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Bialek,Biophysics: searching for principles(Princeton University Press, 2012)

Reference 53

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.938572Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.124565Z digest=sha256:cf5c9f46de1322e4ad3446cd845410b1dd88f798a599da2ef37435d207c231b9

Observation d386ef59-f775-4c46-be3e-4e7873e9db0f · outbound

This paper cites Newhouse and M.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Newhouse and M

Reference 54

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.925942Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.128058Z digest=sha256:a4974efb80f0ad2fec08d2debe975076c34d4c75ba78963055766a3c3d1f1c6a

Observation 6ef2dd3a-4684-4816-b468-cc11a918fb7c · outbound

This paper cites Weinreb, A.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Weinreb, A

Reference 55

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.912887Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.131986Z digest=sha256:4d713e83f92827f242bc10ec9602ae3f791e7995ff531c22a0543ad58f3fe13e

Observation 2ec6807b-d27c-412a-83c3-3657cd0ed275 · outbound

This paper cites Alysandratos, M.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Alysandratos, M

Reference 56

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.900336Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.135838Z digest=sha256:a8ced614745435a0673be46b636ee135fcd16fc6b3ba55ecdaa5c4219e8996c8

Observation 11deb820-6eab-4bc0-b8e1-d36e10d34ab8 · outbound

This paper cites Hawkins, S.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Hawkins, S

Reference 57

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.887803Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.140117Z digest=sha256:e3ec567b121569d89190420f47d24dd5df1508e253973f932c69a95420ef5315

Observation 56862ef1-4cd9-4049-aa21-d7196731ca26 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 58

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.875111Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.144084Z digest=sha256:5b9e1b343e129cccadad4709fdd086e1bee0feb8e86339fbd3f1a3c081d45dff

Observation 858f37ac-4ca6-4add-ab6d-87c42a1786fd · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 59

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.863027Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.147890Z digest=sha256:81bb3a686a294881272c21942f1728bdb0484ceeb168a1151e81ff1dfe66432d

Observation ace1fd66-72d4-419f-adb3-f003ae0a96f0 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 60

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.849897Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.151694Z digest=sha256:f06bd883e4d564ba308292e3a822396ab02aad9af408e03616a540723e8faca3

Observation 373e59af-d9c2-4525-8ce1-4a8ccfa166bd · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 61

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.836797Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.155225Z digest=sha256:641b504342b5f828b5a9aeb133091e1b8a4c56b7d47d0752d49d8ded77a7fb45

Observation 4c635db8-d51e-4f98-9270-4b66d960e03e · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 62

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.823279Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.159773Z digest=sha256:ca1e57065698a1310c5c2138d02388ece9cdddd6225c271d65cd3fe6cba59f40

Observation d769e76b-ee90-4051-a976-dfbcc8151868 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 63

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.809416Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.163621Z digest=sha256:0ad8b10df99236df2f2b8a03041aaf9f86f8d6ca312d458f2bdf03ced601b9be

Observation bbb95109-af0e-4b56-b2dd-944e894f0287 · outbound

This paper cites Pardo-Saganta, B.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Pardo-Saganta, B

Reference 64

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.786318Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.167356Z digest=sha256:a0c9326c72d42e7e4e7160b936c1ca04eff91924b8d4bcd057418e58fd9bd768

Observation 89ca9de6-caa1-4e96-a261-217f49f65ce6 · outbound

This paper cites Goetz, H.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Goetz, H

Reference 65

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.773113Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.171114Z digest=sha256:2443942644430d8847d1a7a2387d8d63f68bff411a1141b74221cd113b62fd84

Observation 0cac5db2-1b0f-429c-be58-02d38141498d · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 66

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.759421Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.174832Z digest=sha256:3483b2683bf0da5f63f6b13afd29c96ce13b60a93fc1cb716d9b4e7844c76a9b

Observation 9322644e-47d8-4170-a463-63e058fe2ffe · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 67

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.746226Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.178860Z digest=sha256:dab63c6ba32ef56ed5ef7a0ec1dfe136d0030d05e593e9be3855b2d84449a90c

Observation 33a7343a-8274-46fb-aa72-d3728bfb421b · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 68

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.732781Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.182756Z digest=sha256:c41e84204c70c092a0c8ee8718303b09069a8b7741968bd27237b08e2ff9d2d9

Observation eaa6c2e5-b438-451e-95a6-7150a8346e92 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 69

Resolution
parse uncertain
raw_fallback, observed 2026-08-07T10:52:49.719682Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.186303Z digest=sha256:ec3c67875fc83117501605a33a2abd5a11f0df231cc45df76ce9c5e255dd9e77

Observation 02f18f12-1ab5-46ad-a6b9-67c7c0561ed7 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 70

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.707079Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.190276Z digest=sha256:3f4013e734ad95da1fd653d77e4bc3b10b9d245ec5f8bd836d7132bb220733dd

Observation d2d04100-ad72-46b0-af43-68f866663647 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 71

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.693748Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.194276Z digest=sha256:25d6864508dc45ab7807c54c2627d38cc4a69f205c2e1f594aebcc8ff93ec6b0

Observation f228f641-4b93-4c68-907b-a27a5b33b3d3 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 72

Resolution
parse uncertain
raw_fallback, observed 2026-08-07T10:52:49.681401Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.198239Z digest=sha256:1be9c45bbb1663a65ef759e3f64cce54913215de5da70726e706a070d4a1eb22

Observation 20606bd5-024e-4c1c-a768-38df717a8f94 · outbound

This paper cites Simulation details 8.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Simulation details 8

Reference 73

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.668411Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.202659Z digest=sha256:4a5fbb559e10dec958ab418f856b47294df4550c88bfd5cf3d1c7b703552096b

Observation 1d44ee0b-21b4-4b5d-9b5c-aa00cf7aae10 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 74

Resolution
parse uncertain
raw_fallback, observed 2026-08-07T10:52:49.655229Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.206554Z digest=sha256:6d1bc289fc661d2fa771b77d9fd80034e5c51853614ebb24b45bd2855f5df383

Observation c06d6e92-07bb-4801-b4bf-76cd4751369f · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 75

Resolution
parse uncertain
raw_fallback, observed 2026-08-07T10:52:49.642812Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.210145Z digest=sha256:7f5bc676bedc09754ee2ad41a7de5af54850f05f9b2bbbfe47ebcf393b855525

Observation d3f0b992-1677-4cfc-9c37-aeac7b0a9654 · outbound

This paper cites Limitations of the model 12 References 12 A.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Limitations of the model 12 References 12 A

Reference 76

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.629015Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.214331Z digest=sha256:ab4dfe45fb3c6065cd54a5ec158965b93793ba12ef9d687a037653bc2406fdee

Observation c7893f28-7be5-4f9b-8982-c91e6ef5426d · outbound

This paper cites As explained in Randet al.[1], two of the simplest bifurcations with three attractors are the binary cusp and the heteroclinic flip.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates As explained in Randet al.[1], two of the simplest bifurcations with three attractors are the binary cusp and the heteroclinic flip

Reference 77

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.615723Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.218081Z digest=sha256:212c956e55ef6d44214ac6a1320c0d50091b2732db135d698b8d1e856a58b404

Observation 570c5515-071e-4d18-8124-7af0552f05ff · outbound

This paper cites In our model, alignment with each cell type is given its own axis, set by the Hopfield-inspired order parametersm µ.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates In our model, alignment with each cell type is given its own axis, set by the Hopfield-inspired order parametersm µ

Reference 78

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.601398Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.222083Z digest=sha256:5928e10d27ef5c8f799703a08099736109ef8a86cd92430725e337b4df08911e

Observation fe1e9eeb-dd37-4234-aa82-fd184717cc64 · outbound

This paper cites Double cusp B.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Double cusp B

Reference 79

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.587679Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.226065Z digest=sha256:64ab462bae7de942185b4a704c3bdb4b7c535e5b200722bbcb03b1f322a85b78

Observation 50bbdcf9-4995-4281-a548-190a79d37881 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 80

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.574577Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.229893Z digest=sha256:eb7d4bffe71e6c5acc22c7df7ca6a65275e5e451e7ce0e22d74fdfa1be5b7b7e

Observation e8538158-2cd2-45cd-a34c-106534f50b0b · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 81

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.562213Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.233723Z digest=sha256:71696d65c3424b3d9bf827b2834c3e037899ae4c9178afa8df2d422b0ecd970c

Observation 219944fd-a717-4e20-bc18-0c5648102b1c · outbound

This paper cites For trans- forming from cell-type spacem µ to landscape space ˜x,˜y, we defineH=K −1.h x,y µ denote the entries ofHsuch that ˜x= P µ hx µmµ and ˜y= P µ hy µmµ.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates For trans- forming from cell-type spacem µ to landscape space ˜x,˜y, we defineH=K −1.h x,y µ denote the entries ofHsuch that ˜x= P µ hx µmµ and ˜y= P µ hy µmµ

Reference 82

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.549640Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.237513Z digest=sha256:c905ac90ebd5fb49817b3243ea7fab40bd3b4ebac5989199284d81eabead3212

Observation bbd0b575-3362-4bf5-9bd2-192ad5e94e8f · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 83

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.537105Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.241187Z digest=sha256:24de733f10e2fdafe4a762ad5c80bc61e0005cbb860190258d38deff60957d98

Observation 57f54a95-cc22-4687-acc5-9a327c82bed2 · outbound

This paper cites In other words, the update rule of the Hopfield model causes this energy function to decrease.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates In other words, the update rule of the Hopfield model causes this energy function to decrease

Reference 84

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.524461Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.245856Z digest=sha256:79ada974e6ac2e756f180d6693c0a50175caad2b90e3f29d022705749c9e405b

Observation 3bea87a1-d2e6-4bc7-858a-4e2e2ce21a60 · outbound

This paper cites Each cell experiences a landscape that is biased towards one fate or another by its neighboring cells.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Each cell experiences a landscape that is biased towards one fate or another by its neighboring cells

Reference 85

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.511526Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.249945Z digest=sha256:69affbeb25c61a4bf575d998c73dbad54c0b78546e65d3fae6df1cfde11e2f2b

Observation be3f5f38-30b1-4f8b-bd25-8231c39d4b32 · outbound

This paper cites The values for the signaling parameters (k, f) were varied as follows.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates The values for the signaling parameters (k, f) were varied as follows

Reference 86

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.498671Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.253778Z digest=sha256:605a89e966088e8036b0afcc356b48c8801b41202f96ec5c4be1b9d7e6de50e8

Observation e5ace226-12af-45c9-9d80-8daa8cc988bc · outbound

This paper cites For the modern Hopfield network to converge to the correct pattern, it is necessary that the temperature is low enough such thate β ≫P, wherePis the number of stored patterns.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates For the modern Hopfield network to converge to the correct pattern, it is necessary that the temperature is low enough such thate β ≫P, wherePis the number of stored patterns

Reference 87

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.485223Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.257539Z digest=sha256:3b9ac66d7a595340e664afdb557e1df2e439c3dd2278080df6293c08193cf168

Observation 1536a3af-98f2-42e7-ba32-ce54128ca806 · outbound

This paper cites The simulations were initiated at the initial attractor state with noise added to the gene expression:x i(t= 0) =ξ 0i +z i.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates The simulations were initiated at the initial attractor state with noise added to the gene expression:x i(t= 0) =ξ 0i +z i

Reference 88

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.471860Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.261556Z digest=sha256:5d4dfa7b7e11668ab46e95c4539fa7e3ae6420777342794c48571240d0358f67

Observation 2dad4dc9-ee74-4df5-ba1c-dde32c962f51 · outbound

This paper cites However, this does not reflect biological reality.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates However, this does not reflect biological reality

Reference 89

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.457776Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.265425Z digest=sha256:190396846691917148e123437de141a4bd86a9aeb41906350bf2ce8865e90b28

Observation 4d763ea7-2ba2-4962-af84-d50f21402b5a · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 90

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.443962Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.269316Z digest=sha256:da036ff38d336af00450997d3f08bc9abbc9c3b7f8c315f908638ac7ff29ddfb

Observation d0321034-7d3a-42b2-b692-c35a987dcbf7 · outbound

This paper cites S´ aez, R.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates S´ aez, R

Reference 91

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.430058Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.273118Z digest=sha256:68649360388b811714575bd07c832cbfc41b4e06a0caf2ed5cf2233a78fa52f2

Observation 204c7b2c-5231-4fc9-801a-acd51891e03c · outbound

This paper cites Kanter and H.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Kanter and H

Reference 92

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.414756Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.276987Z digest=sha256:640226de5bbc731e6851d6b8721d6467485c19cc641c05ec1c405578667e4b18

Observation ba372104-5cd4-45b0-ad96-a6b8e81d6a9e · outbound

This paper cites Chaudhry, J.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Chaudhry, J

Reference 93

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:49.400678Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.280753Z digest=sha256:951cb62f8f443ee9ca8c74086a2286e667e84bf7e1f8c6f8e4ca32d359ddf518

Observation 17d6d8ba-7fb6-4fa0-be29-7e93b5303573 · outbound

This paper cites Large Associative Memory Problem in Neurobiology and Machine Learning.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Large Associative Memory Problem in Neurobiology and Machine Learning

Reference 94

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:49.284365Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:49.284365Z digest=sha256:cda6b543f584f99d38bc26dc2a32fdc076c5bd6bee17c4afbabd8e0a1766b225

Observation e1a077cd-091f-4fbe-a82e-bffe4efd9c3e · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 95

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.386594Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.288265Z digest=sha256:18fff2a7c99ea5208bf9030f747f75c3eb025446127f72a2616de9b9049c2f45

Observation c58911cb-b2a7-4c4f-b48b-08ef607358a9 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 96

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.372852Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.292048Z digest=sha256:b205e3717323dae9fa926329a47def6cc31c8401d13b1ca37625a2fdf4b5cdee

Observation 88e26a87-6b66-4470-b137-a8ca3c613ff8 · outbound

This paper cites an unresolved cited work.

Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates Unresolved cited work

Reference 97

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:49.358987Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

source=pdf_text observed=2026-08-07T10:52:49.295978Z digest=sha256:79919794e9bce7181255d106e38df27dc0829c3c6cb74831692b73ef8fec8206

Pith citing papers

Observation c361895a-6780-4b36-b8de-5fc8de1a35e9 · inbound

Inheritance Entropy: A Model-Independent Method to Probe the Hereditary Structure of Cell Lineage Trees cites this paper.

Inheritance Entropy: A Model-Independent Method to Probe the Hereditary Structure of Cell Lineage Trees Collective gene dynamics leave signatures of decision landscapes in cell fate coordinates

Reference 13

Resolution
unresolved
no resolver link, observed 2026-08-04T08:55:58.122334Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-04T08:55:58.122334Z digest=sha256:c4cb1c5174f0b96c5192679375966f80884ad118302abc05c0f5e9f6ca7b9725