Paper Citation Record · LEDGER

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration

As of 18 August 2026, this Paper Citation Record lists 44 of 44 outbound references and 0 inbound Pith citation observations for arXiv:2509.02639.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2509.02639 v1

Coverage vector

measured 44 of 44 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-05T12:15:01.862637Z

measured 44 of 44 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-18T06:34:40.430872+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

44 of 44 outbound references displayed

verified exact6
verified fuzzy2
unresolved34
parse uncertain0
malformed identifier1
metadata mismatch1

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation ec51ac03-0d4c-482a-b5ff-e88f34fcdf31 · outbound

This paper cites Single-Cell RNA Sequencing Tech- nology Landscape in 2023.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Single-Cell RNA Sequencing Tech- nology Landscape in 2023

Reference 1

Resolution: verified exact; doi, observed 2026-08-05T12:15:01.950894Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 3cd1f856-a12f-4d16-b902-6cd52608d05d · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 2

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.360543Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 705d1134-f02f-4900-924f-af07b0e501bd · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 3

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.350856Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation cbc9d811-6e79-4fab-a58e-64d9117fd1fa · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 4

Resolution: malformed identifier; no resolver link, observed 2026-08-05T12:15:01.739390Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 35071228-d990-4707-b00a-d1aff1674bfa · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 5

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.341118Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation e8a3b8d9-23b1-4f52-952a-0777e760f622 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 6

Resolution: unresolved; no resolver link, observed 2026-08-05T12:15:01.747103Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 5e683ced-4e80-41eb-91a7-cb96463c27bd · outbound

This paper cites UMAP: Uniform Manifold Approximation and Projection for Dimension Reduction.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration UMAP: Uniform Manifold Approximation and Projection for Dimension Reduction

Reference 7

Resolution: unresolved; no resolver link, observed 2026-08-05T12:15:01.750832Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 6b36bba0-4590-4720-a808-8db3f0f119cc · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 8

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.326235Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 7714a207-e962-4839-8a19-52de02f2adfa · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 9

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.317124Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation dbcb519b-756a-4024-966c-1919e5b38a56 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 10

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.308280Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 5249b2fd-e40d-48c1-9270-429b211cc384 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 11

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.298953Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 04d4d5f2-b378-4bcd-922a-f4a6ee470502 · outbound

This paper cites Constructing Domain Ontology for Alzheimer Disease Using Deep Learning Based Approach.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Constructing Domain Ontology for Alzheimer Disease Using Deep Learning Based Approach

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:15:02.288820Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation bd65b0c1-7c3c-4dc2-91dd-5ee1aca98c8b · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 13

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.278836Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 443440a4-03f5-401e-b0b0-8bfe3d21d79e · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 14

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.269485Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 60807717-2390-4635-8261-d338f8043b76 · outbound

This paper cites Forward only counter propagation network for balance scale weight and distance classification task,.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Forward only counter propagation network for balance scale weight and distance classification task,

Reference 15

Resolution: metadata mismatch; raw_fallback, observed 2026-08-05T12:15:02.033624Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 3e344bad-5679-467a-945b-d146a9744b8f · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 16

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.260584Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 7fee8488-f27a-4121-b3ea-058ae1a11a3d · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 17

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.250882Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 8fbda73b-7d14-4dcd-b838-7b91b20a7257 · outbound

This paper cites Brief Bioinform.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Brief Bioinform

Reference 18

Resolution: verified exact; doi, observed 2026-08-05T12:15:01.924174Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 9e29427a-8c5c-4b49-8c2a-8b11e1fdf2f8 · outbound

This paper cites G3DC: a Gene-Graph-Guided se- lective Deep Clustering method for single cell RNA-seq data.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration G3DC: a Gene-Graph-Guided se- lective Deep Clustering method for single cell RNA-seq data

Reference 19

Resolution: verified exact; doi, observed 2026-08-05T12:15:01.914508Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation abff8676-68ee-41fb-9384-a7517997742c · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 21

Resolution: verified exact; doi, observed 2026-08-05T12:15:01.891633Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 955f10b1-e23e-47d9-bbb8-57c3238f7df0 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 22

Resolution: unresolved; no resolver link, observed 2026-08-05T12:15:01.802594Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation c1308d22-5c52-4ece-828a-e4a0affa1d76 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 23

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.235552Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation da2eecb4-46d7-4b65-bc4f-da1437e0fc17 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 24

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.226789Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 0aa8bb9c-4deb-4a8d-a62b-0fe400f99fd5 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 25

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.218529Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 19cd465c-049f-42c5-aba2-0a397a1e0550 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 26

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.209651Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation ad4252f5-8218-4550-b35f-6d2b9a7b8ec4 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 27

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.201289Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 2d454a17-9913-4483-a10f-147f490dd008 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 28

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.192955Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 7a51148c-caad-48a3-9c1a-089e9669a255 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 29

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.183853Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 7113055a-fe81-49c6-b8ab-12a95888aeec · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 30

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.175586Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 71c3fd8b-0be0-48e8-81be-e1940b1166ed · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 31

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.167295Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 211e1e81-5028-4772-b459-dcbbfb65703d · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 32

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.158706Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 7cd7febd-c780-4b45-a51b-3493772d9b18 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 33

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.149706Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation c8b126ac-d46d-4cea-acf1-ae208da8f9a9 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 34

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.140151Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation bc148c7e-a8c3-4610-9c2b-d56b939bcb17 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 35

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.130465Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 60867138-8f82-450b-8fc5-e2077f06c141 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 36

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.120798Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 9ab05f33-0b96-4281-9fcd-598c4a3003b4 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 37

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.111384Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 5c78a77a-4566-4996-a706-4e1cbed80bfc · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 38

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.100922Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation ef7877ca-21b6-428f-8504-c29d21cf4004 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 39

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.091187Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 1495e026-a46f-49e7-b77e-b72e875f6c93 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 40

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.081696Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation d806e52a-30d6-42bf-bdeb-299cf0062f0f · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 41

Resolution: verified exact; doi, observed 2026-08-05T12:15:01.903836Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation ca0e89e9-31d4-4008-a263-0a4556208647 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 42

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.072768Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 62a9d01c-2921-45bb-b41b-600513c366a3 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 43

Resolution: unresolved; raw_fallback, observed 2026-08-05T12:15:02.063060Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 8414d645-880b-4df6-b6be-44623f398db5 · outbound

This paper cites an unresolved cited work.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration Unresolved cited work

Reference 1890

Resolution: verified exact; doi, observed 2026-08-05T12:15:01.934112Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Observation 6c5e66eb-b3b5-4555-a31f-b2b68ab90c8c · outbound

This paper cites R package version 1.1.

Enhanced Single-Cell RNA-seq Embedding through Gene Expression and Data-Driven Gene-Gene Interaction Integration R package version 1.1

Reference 2019

Resolution: verified fuzzy; raw_fallback, observed 2026-08-05T12:15:02.053889Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-18T06:34:40.430872+00:00.

Pith citing papers

No inbound Pith citation observations are available.