MOSAIK: A hash-based algorithm for accurate next-generation sequencing read mapping

2); (2) Illumina; 3); (3) Broad Institute of Harvard; Alistair Ward (1); Boston College; CA; Cambridge; Chestnut Hill; Chip Stewart (1

arxiv: 1309.1149 · v1 · pith:5VDVG6W3new · submitted 2013-09-04 · 🧬 q-bio.GN · q-bio.QM

MOSAIK: A hash-based algorithm for accurate next-generation sequencing read mapping

Wan-Ping Lee (1) , Michael Stromberg (1 , 2) , Alistair Ward (1) , Chip Stewart (1 , 3) , Erik Garrison (1) , Gabor T. Marth (1) ((1) Department of Biology

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Boston College Chestnut Hill MA (2) Illumina Inc. San Diego CA (3) Broad Institute of Harvard Massachusetts Institute of Technology Cambridge MA)

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keywords accuratenext-generationsequencingalgorithmclinicaldatagenomegenomes

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This paper presents an accurate short-read mapper for next-generation sequencing data which is widely used in the 1000 Genomes Project, and human clinical and other species genome studies.

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MOSAIK: A hash-based algorithm for accurate next-generation sequencing read mapping

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