Paper Citation Record · LEDGER

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data

As of 19 August 2026, this Paper Citation Record lists 37 of 37 outbound references and 1 inbound Pith citation observation for arXiv:2411.14464.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2411.14464 v3

Coverage vector

measured 37 of 37 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-12T18:49:42.864113Z

measured 38 of 38 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-19T06:32:44.657259+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-10T22:20:45.941857Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-08-10T22:20:46.136142Z

Reference resolution

37 of 37 outbound references displayed

verified exact1
verified fuzzy18
unresolved18
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 56c58baa-0b5d-4938-b3d9-e1fdd7cf0117 · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 1

Resolution: verified exact; doi, observed 2026-08-12T18:49:42.903976Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 5674abc5-e3a5-456f-a3f9-fc88f6373974 · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 2

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.665321Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 6747da23-9d64-4c82-859a-d8848a0a3bbf · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 3

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.633688Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation d20b151b-6447-4383-82d7-9a166bc7ad03 · outbound

This paper cites F., Louwen, J.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data F., Louwen, J

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.612212Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 529bcb99-7752-47a1-bf1c-3f6401c0831d · outbound

This paper cites u hrkop, K., Shen, H., Meusel, M., Rousu, J., and B \.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data u hrkop, K., Shen, H., Meusel, M., Rousu, J., and B \

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.590359Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 654dbf8a-c2b3-41be-9ddf-8c8268afb578 · outbound

This paper cites u hrkop, K., Fleischauer, M., Ludwig, M., Aksenov, A. A., Melnik, A. V., Meusel, M., Dorrestein, P. C., Rousu, J., and B \.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data u hrkop, K., Fleischauer, M., Ludwig, M., Aksenov, A. A., Melnik, A. V., Meusel, M., Dorrestein, P. C., Rousu, J., and B \

Reference 6

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.565061Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation e17f0436-d49b-4df8-b717-f0e24f73da94 · outbound

This paper cites A., Petras, D., Gerwick, W.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data A., Petras, D., Gerwick, W

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.541481Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation bf10b262-6bb3-4faf-a659-99f3d67f1968 · outbound

This paper cites J., and Coley, C.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data J., and Coley, C

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.507287Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 50bd2d22-3ca6-4d0c-a30e-b86e9746a125 · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 9

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.487036Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation e10575a9-6904-47bf-b41f-ff3d44cd48df · outbound

This paper cites J., and Ridder, L.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data J., and Ridder, L

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.460121Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 122a3c7d-ec8a-4182-8aa1-f4b7b5fc16b0 · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 11

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.435814Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 71c0ab88-3e36-452b-9c6c-90351de7373e · outbound

This paper cites A., Thiessen, P.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data A., Thiessen, P

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.406805Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 335bdaea-2f55-49ea-8601-8e4482389477 · outbound

This paper cites S., Wohlgemuth, G., Barupal, D.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data S., Wohlgemuth, G., Barupal, D

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.385479Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation fdaa8f5e-8414-45bc-a0cd-90214ee41bef · outbound

This paper cites Adam: A Method for Stochastic Optimization.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Adam: A Method for Stochastic Optimization

Reference 14

Resolution: unresolved; no resolver link, observed 2026-08-12T18:49:42.735138Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation b72056b3-20e9-4321-82d6-7b30bcd33c17 · outbound

This paper cites Semi-Supervised Classification with Graph Convolutional Networks.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Semi-Supervised Classification with Graph Convolutional Networks

Reference 15

Resolution: unresolved; no resolver link, observed 2026-08-12T18:49:42.741340Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e44a02fe-f399-4ae3-abac-dffbcae4e5c5 · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 16

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.361390Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 75735777-38ce-46ed-9101-54e22e5d7a11 · outbound

This paper cites E., Chenthamarakshan, V., Das, P., and Kavraki, L.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data E., Chenthamarakshan, V., Das, P., and Kavraki, L

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.336829Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation ef9ba7c3-0f31-4c0b-ab8f-656bf5ca1b80 · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 18

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.315729Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 99625b0c-ec21-47ed-a2d7-133e4a8eeb2c · outbound

This paper cites MassBank of North America.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data MassBank of North America

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.294522Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation b5a1ff09-c051-493b-a0e1-1262ad2bbb9b · outbound

This paper cites NIST20 : Updates to the nist tandem and electron ionization spectral libraries.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data NIST20 : Updates to the nist tandem and electron ionization spectral libraries

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.275069Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 7d9e0c9c-9fa4-4c5e-90b1-23dbbcb1df01 · outbound

This paper cites W., Hallacy, C., Ramesh, A., Goh, G., Agarwal, S., Sastry, G., Askell, A., Mishkin, P., Clark, J., et al.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data W., Hallacy, C., Ramesh, A., Goh, G., Agarwal, S., Sastry, G., Askell, A., Mishkin, P., Clark, J., et al

Reference 21

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.255082Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 3ae170fc-a1ab-4ded-9ba0-4b83d39a53ac · outbound

This paper cites L., Wolf, S., Hollender, J., and Neumann, S.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data L., Wolf, S., Hollender, J., and Neumann, S

Reference 22

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.232313Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation a4427b2b-e00f-4d33-a96a-cbefe8526169 · outbound

This paper cites u hrkop, K., B \.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data u hrkop, K., B \

Reference 23

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.210457Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 1fcdb8f4-d2b1-4cc8-977b-2565decad3c2 · outbound

This paper cites and Zhang, Y.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data and Zhang, Y

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.192475Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 455078d6-85ad-438d-8b99-df6597ffd2ba · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 25

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.170362Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation b0f1cd85-112b-4eb1-934f-103b9b47791d · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 26

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.151867Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation c0c4eedf-b708-45f5-a5fe-bf35d7745101 · outbound

This paper cites J., Phelan, V.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data J., Phelan, V

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.131573Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation b63a1f06-38b7-4826-8e93-fed3d2512f87 · outbound

This paper cites N., Belanger, D., Adams, R.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data N., Belanger, D., Adams, R

Reference 28

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.111874Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 0002a80a-2d84-4593-9b06-07935e377363 · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 29

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.091992Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 4ae47203-670f-42d5-8150-ea0dfa32a875 · outbound

This paper cites MassFormer: Tandem Mass Spectrum Prediction for Small Molecules using Graph Transformers.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data MassFormer: Tandem Mass Spectrum Prediction for Small Molecules using Graph Transformers

Reference 30

Resolution: unresolved; no resolver link, observed 2026-08-12T18:49:42.826974Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation a7999b7d-544e-48fd-95d2-00e11ede3d72 · outbound

This paper cites Using Graph Neural Networks for Mass Spectrometry Prediction.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Using Graph Neural Networks for Mass Spectrometry Prediction

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-12T18:49:42.832840Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e1b438bd-be1a-4e2d-ae66-db977a844c05 · outbound

This paper cites , " * write output.state after.block = add.period write newline.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data , " * write output.state after.block = add.period write newline

Reference 32

Resolution: unresolved; no resolver link, observed 2026-08-12T18:49:42.838073Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 5a48ab51-f21f-4358-a4f6-083986fe800d · outbound

This paper cites write newline.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data write newline

Reference 33

Resolution: unresolved; no resolver link, observed 2026-08-12T18:49:42.843248Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 600cd002-74ee-4879-adc2-61a9d312484e · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 34

Resolution: unresolved; raw_fallback, observed 2026-08-12T18:49:43.046938Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation 0b82ad7e-f6ce-4e9e-ab5d-815f4ecf0733 · outbound

This paper cites an unresolved cited work.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data Unresolved cited work

Reference 35

Resolution: unresolved; no resolver link, observed 2026-08-12T18:49:42.853974Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation c7597427-dc36-420e-a1a8-91a3c635f940 · outbound

This paper cites , " * write output.state after.block = add.period write newline.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data , " * write output.state after.block = add.period write newline

Reference 36

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T18:49:43.015666Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.

Observation bc64693f-a7a3-4de1-b026-299c8103f90d · outbound

This paper cites write newline.

JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data write newline

Reference 37

Resolution: unresolved; no resolver link, observed 2026-08-12T18:49:42.864113Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Pith citing papers

Observation a1434016-bbd8-4f56-a660-66aa06977072 · inbound

MADGEN: Mass-Spec attends to De Novo Molecular generation cites this paper.

MADGEN: Mass-Spec attends to De Novo Molecular generation JESTR: Joint Embedding Space Technique for Ranking Candidate Molecules for the Annotation of Untargeted Metabolomics Data

Reference 20

Resolution: verified exact; local_arxiv, observed 2026-08-10T22:20:46.141406Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-19T06:32:44.657259+00:00.