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arxiv: 1312.1255 · v1 · pith:7UNEA4SFnew · submitted 2013-12-04 · 🧬 q-bio.PE · math.CO

A short note on exponential-time algorithms for hybridization number

classification 🧬 q-bio.PE math.CO
keywords computedhybridizationnotenumbersameshorttimeacyclic
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In this short note we prove that, given two (not necessarily binary) rooted phylogenetic trees T_1, T_2 on the same set of taxa X, where |X|=n, the hybridization number of T_1 and T_2 can be computed in time O^{*}(2^n) i.e. O(2^{n} poly(n)). The result also means that a Maximum Acyclic Agreement Forest (MAAF) can be computed within the same time bound.

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