Paper Citation Record · LEDGER

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization

As of 14 August 2026, this Paper Citation Record lists 42 of 42 outbound references and 0 inbound Pith citation observations for arXiv:2411.19503.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2411.19503 v1

Coverage vector

measured 42 of 42 reference resolution

Typed states for the displayed outbound observations.

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One-hop event checks from named stored sources.

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Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

42 of 42 outbound references displayed

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External citation measurements

No source-named external measurement is stored.

Outbound references

Observation db65efa9-b671-49fb-8b53-79125fb03a8b · outbound

This paper cites Computer-Assisted Design of Complex Organic Syntheses: Pathways for molecular synthesis can be devised with a computer and equipment for graphical communication.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Computer-Assisted Design of Complex Organic Syntheses: Pathways for molecular synthesis can be devised with a computer and equipment for graphical communication

Reference 1

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Observation 5d89b26a-5927-4c99-9649-2015a2bb892e · outbound

This paper cites General methods for the construction of complex molecules.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization General methods for the construction of complex molecules

Reference 2

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Observation 9793dede-7726-4fcc-bd6f-9cf62baf5392 · outbound

This paper cites Computer-assisted synthetic analysis. Methods for machine generation of synthetic intermediates involving multistep look-ahead.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Computer-assisted synthetic analysis. Methods for machine generation of synthetic intermediates involving multistep look-ahead

Reference 3

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Observation d0bd4450-d5a0-4126-b2d0-315a0c66cd61 · outbound

This paper cites SOPHIA, a knowledge base-guided reaction prediction system-utilization of a knowledge base derived from a reaction database.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization SOPHIA, a knowledge base-guided reaction prediction system-utilization of a knowledge base derived from a reaction database

Reference 4

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Observation c2d91afa-dc9c-42fe-a74b-1f68f77e776d · outbound

This paper cites Chemoinformatics: a textbook , John Wiley & Sons, 2006.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Chemoinformatics: a textbook , John Wiley & Sons, 2006

Reference 5

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Source-reported events for the cited work

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Observation 360ecf17-279c-46ce-9dc5-bd3dc844c86c · outbound

This paper cites Computer-assisted synthetic planning: the end of the beginning.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Computer-assisted synthetic planning: the end of the beginning

Reference 6

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Observation 91a53a4c-8539-4958-93a5-1a32bc902a0e · outbound

This paper cites Neural-symbolic machine learning for retrosynthesis and reaction prediction.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Neural-symbolic machine learning for retrosynthesis and reaction prediction

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.105922Z

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Observation b82ba0cc-194d-4565-8296-877cf10b4d18 · outbound

This paper cites Retrosynthesis prediction with conditional graph logic network.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Retrosynthesis prediction with conditional graph logic network

Reference 8

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Observation 1fc8c723-7ed0-4b4b-8851-3aa18ec9772b · outbound

This paper cites Deep retrosynthetic reaction prediction using local reac- tivity and global attention.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Deep retrosynthetic reaction prediction using local reac- tivity and global attention

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.086134Z

Source-reported events for the cited work

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Observation 42abffb4-3091-4cec-b88c-bda40bedee67 · outbound

This paper cites RDChiral: An RDKit wrapper for handling stereochemistry in retrosynthetic template extraction and application.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization RDChiral: An RDKit wrapper for handling stereochemistry in retrosynthetic template extraction and application

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.071762Z

Source-reported events for the cited work

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Observation c78189fd-e543-4060-9a10-8a62b7345b01 · outbound

This paper cites Computer-assisted retrosynthesis based on molecular similarity.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Computer-assisted retrosynthesis based on molecular similarity

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.061961Z

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Observation 5550131b-0e8e-4076-aeb2-8b6dfbacc168 · outbound

This paper cites Retrosynthetic reaction prediction using neural sequence-to-sequence models.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Retrosynthetic reaction prediction using neural sequence-to-sequence models

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.052767Z

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Observation 8476b7e3-7a1d-4d55-8c2b-7be7b933d6ef · outbound

This paper cites SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.043567Z

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Observation fbf7eb68-3635-4c15-a685-2ce7509968b7 · outbound

This paper cites Predicting retrosynthetic reactions using self-corrected transformer neural networks.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Predicting retrosynthetic reactions using self-corrected transformer neural networks

Reference 14

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Source-reported events for the cited work

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Observation 8f93cee6-8d67-4503-a83d-77543d7ebd0b · outbound

This paper cites Attention is all you need.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Attention is all you need

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.026182Z

Source-reported events for the cited work

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Observation 8d569079-b9ce-46d5-9176-68d49936d1d6 · outbound

This paper cites Retroformer: Pushing the Limits of Interpretable End-to-end Retrosynthesis Transformer.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Retroformer: Pushing the Limits of Interpretable End-to-end Retrosynthesis Transformer

Reference 16

Resolution: verified exact; local_arxiv, observed 2026-08-12T10:10:04.810012Z

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Observation 5b9028f7-915c-4e48-b020-bf530cccee27 · outbound

This paper cites GTA: Graph truncated attention for retrosynthesis.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization GTA: Graph truncated attention for retrosynthesis

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.017569Z

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Observation 253feb60-40e5-4630-9dd0-1c1945067ac9 · outbound

This paper cites Towards understanding retrosynthesis by energy-based models.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Towards understanding retrosynthesis by energy-based models

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.008763Z

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Observation 673415af-2574-4289-8c16-e633317995ba · outbound

This paper cites Permutation invariant graph-to-sequence model for template-free retrosynthesis and reaction prediction.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Permutation invariant graph-to-sequence model for template-free retrosynthesis and reaction prediction

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:05.000104Z

Source-reported events for the cited work

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Observation 6d0ab6db-3561-4ba9-99b7-ea248eb7f7e6 · outbound

This paper cites Retroxpert: Decompose retrosynthesis prediction like a chemist.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Retroxpert: Decompose retrosynthesis prediction like a chemist

Reference 20

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.991126Z

Source-reported events for the cited work

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Observation 90e9ae31-f894-46f1-8102-0c1235355fec · outbound

This paper cites A Graph to Graphs Framework for Retrosynthesis Prediction.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization A Graph to Graphs Framework for Retrosynthesis Prediction

Reference 21

Resolution: verified exact; local_arxiv, observed 2026-08-12T10:10:04.797431Z

Source-reported events for the cited work

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Observation fe6144a4-7dba-409d-b90f-d88dfc229d79 · outbound

This paper cites RetroPrime: A Diverse, plausible and Transformer-based method for Single-Step retrosynthesis predictions.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization RetroPrime: A Diverse, plausible and Transformer-based method for Single-Step retrosynthesis predictions

Reference 22

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Observation dadd9b35-b818-4075-bfae-26628fe47689 · outbound

This paper cites Retrosynthesis prediction using an end-to-end graph generative archi- tecture for molecular graph editing.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Retrosynthesis prediction using an end-to-end graph generative archi- tecture for molecular graph editing

Reference 23

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.973183Z

Source-reported events for the cited work

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Observation a1c4fc15-2ec2-4ffd-80af-dd045919b8fa · outbound

This paper cites Retrosynthesis prediction with an interpretable deep-learning framework based on molecular assembly tasks.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Retrosynthesis prediction with an interpretable deep-learning framework based on molecular assembly tasks

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.963458Z

Source-reported events for the cited work

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Observation f1f0e55f-25c2-4a81-a2c6-5286bb3ac6c2 · outbound

This paper cites Molecule edit graph attention network: modeling chemical reactions as sequences of graph edits.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Molecule edit graph attention network: modeling chemical reactions as sequences of graph edits

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.954443Z

Source-reported events for the cited work

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Observation c2a7186f-29e8-4710-9c0d-1ddb52a1823d · outbound

This paper cites G 2 Retro as a two-step graph generative models for retrosynthesis pre- diction.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization G 2 Retro as a two-step graph generative models for retrosynthesis pre- diction

Reference 26

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.945992Z

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Observation 70ea6673-181a-47c6-a893-99577993a57a · outbound

This paper cites Molecular contrastive learning of representations via graph neural networks.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Molecular contrastive learning of representations via graph neural networks

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.937628Z

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Observation 39a5eda1-9469-4923-9299-b77f739ac8a9 · outbound

This paper cites A simple framework for contrastive learning of visual representations.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization A simple framework for contrastive learning of visual representations

Reference 29

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Observation a65415c9-15bb-45cf-b77d-281f0f806c4a · outbound

This paper cites Density functional theory of electronic structure.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Density functional theory of electronic structure

Reference 30

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.910540Z

Source-reported events for the cited work

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Observation acc8cc36-ab3b-45bb-8f5a-2e5f8e9f5764 · outbound

This paper cites Conceptual density functional theory.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Conceptual density functional theory

Reference 31

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.901508Z

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Observation 04e0005b-f266-4a8c-8568-198270c3b47e · outbound

This paper cites Merck molecular force field. I. Basis, form, scope, parameterization, and performance of MMFF94.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Merck molecular force field. I. Basis, form, scope, parameterization, and performance of MMFF94

Reference 32

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.892470Z

Source-reported events for the cited work

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Observation 29edd9ee-7969-4ef4-8568-df6ddb0dd0c8 · outbound

This paper cites An open source chemical structure curation pipeline using RDKit.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization An open source chemical structure curation pipeline using RDKit

Reference 33

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.883798Z

Source-reported events for the cited work

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Observation c8833a5e-02e1-4a8e-ad37-9e3dda270516 · outbound

This paper cites What’s what: The (nearly) definitive guide to reaction role as- signment.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization What’s what: The (nearly) definitive guide to reaction role as- signment

Reference 34

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.874336Z

Source-reported events for the cited work

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Observation ed16c76b-8b9e-45d3-8223-11d79b141fc4 · outbound

This paper cites Automatic mapping of atoms across both simple and complex chemical reactions.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Automatic mapping of atoms across both simple and complex chemical reactions

Reference 35

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.864701Z

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Observation c592fa75-14de-4b86-b170-85eea3949464 · outbound

This paper cites Learning graph models for retrosynthesis prediction.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Learning graph models for retrosynthesis prediction

Reference 36

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.928836Z

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Observation 1e28e7b0-e4a4-4237-a99b-fbca21fe7ce5 · outbound

This paper cites Highly Accurate Quantum Chemical Property Prediction with Uni-Mol+.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Highly Accurate Quantum Chemical Property Prediction with Uni-Mol+

Reference 37

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Observation 642a082b-2e5e-4bd5-a753-4f5f924aa278 · outbound

This paper cites Do transformers really perform badly for graph representation?.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Do transformers really perform badly for graph representation?

Reference 38

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.854844Z

Source-reported events for the cited work

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Observation c9961462-02b9-41ee-9ab4-54b2468e5c41 · outbound

This paper cites GEOM, energy-annotated molecular con- formations for property prediction and molecular generation.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization GEOM, energy-annotated molecular con- formations for property prediction and molecular generation

Reference 39

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.845933Z

Source-reported events for the cited work

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Observation 76b56457-d099-4d62-a3c6-4a76964eccef · outbound

This paper cites Decoupled Weight Decay Regularization.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Decoupled Weight Decay Regularization

Reference 40

Resolution: unresolved; no resolver link, observed 2026-08-12T10:10:04.740831Z

Source-reported events for the cited work

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Observation eda93437-7ebe-4f41-8b47-58c0a9cfc89b · outbound

This paper cites Predicting retrosynthetic pathways using transformer-based mod- els and a hyper-graph exploration strategy.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Predicting retrosynthetic pathways using transformer-based mod- els and a hyper-graph exploration strategy

Reference 41

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.836849Z

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Observation a473fb10-00c3-4a7a-acf2-814b8ac82018 · outbound

This paper cites Molecular transformer: a model for uncertainty-calibrated chem- ical reaction prediction.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Molecular transformer: a model for uncertainty-calibrated chem- ical reaction prediction

Reference 42

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.828011Z

Source-reported events for the cited work

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Observation d67a962f-03ff-492f-ba12-018b943a4946 · outbound

This paper cites Synthesis and clinical application of new drugs approved by FDA in 2023.

Hierarchical Framework for Retrosynthesis Prediction with Enhanced Reaction Center Localization Synthesis and clinical application of new drugs approved by FDA in 2023

Reference 43

Resolution: verified fuzzy; raw_fallback, observed 2026-08-12T10:10:04.818908Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-14T06:32:32.682623+00:00.

Pith citing papers

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