pith. sign in

arxiv: 2312.10176 · v3 · pith:FTMORXUNnew · submitted 2023-12-15 · 📊 stat.ME

Spectral estimation for spatial point processes and random fields

Pith reviewed 2026-05-24 05:20 UTC · model grok-4.3

classification 📊 stat.ME
keywords spectral estimationspatial point processesrandom fieldsmultitaper analysisdiscrete Fourier transformirregular domainspartial associationspatial statistics
0
0 comments X

The pith

A multitaper framework using coupled tapers and the discrete Fourier transform enables spectral estimation for spatial point processes and random fields on irregular domains.

A machine-rendered reading of the paper's core claim, the machinery that carries it, and where it could break.

Spatial observations often mix regularly sampled random fields, point processes, and randomly sampled processes, making joint analysis desirable yet previously difficult due to missing practical tools. The paper supplies a multitaper framework that pairs discrete and continuous data tapers with the discrete Fourier transform to perform this analysis. The method extends to irregular domains rather than requiring Cartesian grids and supplies estimators of partial association between processes along with significance tests. These tools support fast computation and come with statements of their asymptotic and large-sample properties. The authors illustrate the approach on a large ecological dataset to show its applied value.

Core claim

We fill this gap by providing a multitaper analysis framework using coupled discrete and continuous data tapers, combined with the discrete Fourier transform for inference. Using this set of tools is important, as it forms the backbone for practical spectral analysis. In higher dimensions it is important not to be constrained to Cartesian product domains, and so we develop the methodology for spectral analysis using irregular domain data tapers, and the tapered discrete Fourier transform. We discuss its fast implementation, and the asymptotic as well as large finite domain properties. Estimators of partial association between different spatial processes are provided as are principled methods

What carries the argument

Multitaper analysis framework that couples discrete and continuous data tapers with the tapered discrete Fourier transform on irregular domains.

If this is right

  • Joint spectral analysis becomes feasible for collections that include lattice data, point processes, and randomly sampled spatial processes.
  • Spectral methods apply directly to irregular domains without forcing a Cartesian product structure.
  • Fast implementation is available together with explicit statements of asymptotic and large finite-domain behavior.
  • Partial-association estimators between distinct spatial processes come with principled significance procedures.

Where Pith is reading between the lines

These are editorial extensions of the paper, not claims the author makes directly.

  • The same taper-coupling idea may transfer to mixed observation types in time-series or spatio-temporal settings.
  • Software packages implementing the irregular-domain tapered DFT would lower the barrier for ecologists and environmental scientists.
  • Direct comparison against existing periodogram or Whittle-likelihood methods on controlled irregular grids would quantify any practical gains in bias or variance.
  • The partial-association estimators could be extended to test for conditional independence in networks of spatial processes.

Load-bearing premise

The assumption that coupled discrete and continuous data tapers can be combined with the tapered discrete Fourier transform on irregular domains while preserving the claimed asymptotic and large finite-domain properties without introducing unaccounted bias or variance inflation.

What would settle it

A Monte Carlo experiment on an irregular spatial domain in which the multitaper spectral estimators exhibit bias or variance that exceeds the rates stated in the paper's asymptotic analysis.

Figures

Figures reproduced from arXiv: 2312.10176 by David J. Murrell, Jake P. Grainger, Sofia C. Olhede, Tuomas A. Rajala.

Figure 1
Figure 1. Figure 1: Simulated patterns (top), the inhomogeneous cross-L function (bottom left), and the partial coherence [PITH_FULL_IMAGE:figures/full_fig_p003_1.png] view at source ↗
Figure 2
Figure 2. Figure 2: An illustration of the aliasing effects in one dimension, assuming the first process was recorded continuously, [PITH_FULL_IMAGE:figures/full_fig_p008_2.png] view at source ↗
Figure 3
Figure 3. Figure 3: Four of the tapers and the total average absolute taper for an irregular region (top), and the corresponding [PITH_FULL_IMAGE:figures/full_fig_p012_3.png] view at source ↗
Figure 4
Figure 4. Figure 4: The results of computing the magnitude coherence (upper triangle) and magnitude partial coherence (lower [PITH_FULL_IMAGE:figures/full_fig_p014_4.png] view at source ↗
Figure 5
Figure 5. Figure 5: Results of the simulation study. The left column shows for each model the true magnitude (partial) coherence [PITH_FULL_IMAGE:figures/full_fig_p015_5.png] view at source ↗
Figure 6
Figure 6. Figure 6: The true spectral density function of the IID marked Poisson process (dashed), the average of the multitaper [PITH_FULL_IMAGE:figures/full_fig_p059_6.png] view at source ↗
Figure 7
Figure 7. Figure 7: A realization of models 2 (left) and 3 (right). The spatial data has axes 0 to 1000 and 0 to 500, and the [PITH_FULL_IMAGE:figures/full_fig_p061_7.png] view at source ↗
Figure 8
Figure 8. Figure 8: The log marginal spectra, coherence and phase for the colocation model. In each case, we show and the [PITH_FULL_IMAGE:figures/full_fig_p062_8.png] view at source ↗
Figure 9
Figure 9. Figure 9: The log marginal spectra, coherence and phase for the shifted model. In each case, we show and the ground [PITH_FULL_IMAGE:figures/full_fig_p063_9.png] view at source ↗
Figure 10
Figure 10. Figure 10: The empirical distributions of the magnitude correlation and partial magnitude correlation for normal random [PITH_FULL_IMAGE:figures/full_fig_p065_10.png] view at source ↗
Figure 11
Figure 11. Figure 11: The phase (upper triangle of the plot matrix) and partial phase (lower triangle) of [PITH_FULL_IMAGE:figures/full_fig_p066_11.png] view at source ↗
read the original abstract

Spatial variables can be observed in many different forms, such as regularly sampled random fields (lattice data), point processes, and randomly sampled spatial processes. Joint analysis of such collections of observations is clearly desirable, but complicated by the lack of an easily implementable analysis framework. We fill this gap by providing a multitaper analysis framework using coupled discrete and continuous data tapers, combined with the discrete Fourier transform for inference. Using this set of tools is important, as it forms the backbone for practical spectral analysis. In higher dimensions it is important not to be constrained to Cartesian product domains, and so we develop the methodology for spectral analysis using irregular domain data tapers, and the tapered discrete Fourier transform. We discuss its fast implementation, and the asymptotic as well as large finite domain properties. Estimators of partial association between different spatial processes are provided as are principled methods to determine their significance, and we demonstrate their practical utility on a large-scale ecological dataset.

Editorial analysis

A structured set of objections, weighed in public.

Desk editor's note, referee report, simulated authors' rebuttal, and a circularity audit. Tearing a paper down is the easy half of reading it; the pith above is the substance, this is the friction.

Referee Report

2 major / 1 minor

Summary. The manuscript develops a multitaper spectral estimation framework for joint analysis of spatial point processes, lattice random fields, and irregularly sampled processes. It combines coupled discrete and continuous data tapers with the tapered discrete Fourier transform, extends the approach to irregular domains, derives fast implementations together with asymptotic and large finite-sample properties, supplies estimators of partial association between processes, and provides significance tests; the methods are illustrated on a large ecological dataset.

Significance. If the asymptotic claims and bias/variance control hold, the framework would supply a practical, implementable backbone for spectral analysis of heterogeneous spatial data on non-Cartesian domains and for partial-association inference, addressing a clear methodological gap with direct utility in ecology and spatial statistics.

major comments (2)
  1. [Abstract] Abstract: the central claim that coupled discrete/continuous tapers combined with the tapered DFT on irregular domains preserve the stated asymptotic and large finite-domain properties without unaccounted bias or variance inflation is load-bearing for all subsequent inference results, yet the provided text supplies no derivations, error bounds, or simulation validation that would allow verification of this property.
  2. [Abstract] Abstract: the partial-association estimators and their significance procedures are presented as a key contribution, but without explicit expressions, bias analysis, or comparison to existing cross-spectral methods it is impossible to assess whether they achieve the claimed principled significance control.
minor comments (1)
  1. [Abstract] The abstract refers to 'fast implementation' and 'large finite domain properties' without indicating where the algorithmic complexity or finite-sample bounds are stated.

Simulated Author's Rebuttal

2 responses · 0 unresolved

We thank the referee for their comments on our manuscript. We provide point-by-point responses to the major comments below.

read point-by-point responses
  1. Referee: [Abstract] Abstract: the central claim that coupled discrete/continuous tapers combined with the tapered DFT on irregular domains preserve the stated asymptotic and large finite-domain properties without unaccounted bias or variance inflation is load-bearing for all subsequent inference results, yet the provided text supplies no derivations, error bounds, or simulation validation that would allow verification of this property.

    Authors: The abstract serves as a high-level overview of the contributions. Detailed derivations of the asymptotic and large finite-domain properties, including error bounds and analysis of bias and variance for the coupled tapers and tapered DFT, are presented in Sections 3, 4, and 5 of the manuscript. Simulation studies validating these properties without unaccounted inflation are provided in Section 6. We are happy to revise the abstract to reference these sections explicitly if that would aid the reader. revision: partial

  2. Referee: [Abstract] Abstract: the partial-association estimators and their significance procedures are presented as a key contribution, but without explicit expressions, bias analysis, or comparison to existing cross-spectral methods it is impossible to assess whether they achieve the claimed principled significance control.

    Authors: Explicit mathematical expressions for the partial association estimators, along with their bias analysis and asymptotic properties, are derived in Section 7. The significance procedures are also detailed there, including comparisons to existing cross-spectral approaches in the related work section. These methods are applied to the ecological dataset in Section 8 to illustrate their performance. The full details in the manuscript allow for assessment of the significance control. revision: no

Circularity Check

0 steps flagged

No significant circularity detected

full rationale

The provided abstract and description outline a methodological contribution introducing a multitaper framework with coupled tapers and tapered DFT on irregular domains, plus partial association estimators. No equations, derivations, or self-citations are supplied that reduce any claimed prediction or result to a fitted input or prior self-referential definition by construction. The central claims rest on new technical development rather than renaming, smuggling ansatzes, or importing uniqueness from the authors' own prior work. This is the expected honest non-finding for a methods paper whose derivation chain is not shown to collapse into its inputs.

Axiom & Free-Parameter Ledger

0 free parameters · 0 axioms · 0 invented entities

Abstract-only review; no explicit free parameters, axioms, or invented entities are stated in the provided text.

pith-pipeline@v0.9.0 · 5703 in / 1088 out tokens · 29867 ms · 2026-05-24T05:20:50.267476+00:00 · methodology

discussion (0)

Sign in with ORCID, Apple, or X to comment. Anyone can read and Pith papers without signing in.

Forward citations

Cited by 1 Pith paper

Reviewed papers in the Pith corpus that reference this work. Sorted by Pith novelty score.

  1. The partial K function

    stat.ME 2025-12 unverdicted novelty 7.0

    The partial K function is a new summary statistic for point-point interactions that adjusts for other point types and reduces to the standard K function under independence.

Reference graph

Works this paper leans on

53 extracted references · 53 canonical work pages · cited by 1 Pith paper · 1 internal anchor

  1. [1]

    and Romero, J

    And \'e n, J. and Romero, J. L. (2020). Multitaper estimation on arbitrary domains. SIAM Journal on Imaging Sciences , 13(3):1565--1594

  2. [2]

    and Silverman, B

    Baddeley, A. and Silverman, B. W. (1984). A cautionary example on the use of second-order methods for analyzing point patterns. Biometrics , pages 1089--1093

  3. [3]

    and Lahiri, S

    Bandyopadhyay, S. and Lahiri, S. N. (2009). Asymptotic properties of discrete F ourier transforms for spatial data. Sankhy \=a : The Indian Journal of Statistics, Series A , pages 221--259

  4. [4]

    H., Magland, J., and af Klinteberg, L

    Barnett, A. H., Magland, J., and af Klinteberg, L. (2019). A parallel nonuniform fast F ourier transform library based on an ``exponential of semicircle'' kernel. SIAM Journal on Scientific Computing , 41(5):C479--C504

  5. [5]

    Bartlett, M. S. (1963). The spectral analysis of point processes. Journal of the Royal Statistical Society Series B: Statistical Methodology , 25(2):264--281

  6. [6]

    Bartlett, M. S. (1964). The spectral analysis of two-dimensional point processes. Biometrika , 51(3/4):299--311

  7. [7]

    Brillinger, D. (1972). The spectral analysis of stationary interval functions. Proceedings of the 6th Berkeley Symposium on Mathematical Statistics and Probability , 1

  8. [8]

    Brillinger, D. R. (1965). An introduction to polyspectra. The Annals of Mathematical Statistics , 36(5):1351--1374

  9. [9]

    Brillinger, D. R. (1974). Time Series: Data Analysis and Theory . International series in decision processes. Holt, Rinehart, and Winston, New York

  10. [10]

    Brillinger, D. R. (1982). Asymptotic normality of finite F ourier transforms of stationary generalized processes. J. Multivariate Analy. , 12(1):64--71

  11. [11]

    Carter, G., Knapp, C., and Nuttall, A. (1973). Statistics of the estimate of the magnitute-coherence function. IEEE transactions on audio and electroacoustics , 21(4):388--389

  12. [12]

    Carter, G. C. (1987). Coherence and time delay estimation. Proceedings of the IEEE , 75(2):236--255

  13. [13]

    N., Stoyan, D., Kendall, W

    Chiu, S. N., Stoyan, D., Kendall, W. S., and Mecke, J. (2013). Stochastic geometry and its applications . John Wiley & Sons

  14. [14]

    Condit, R., Pérez, R., Aguilar, S., Lao, S., Foster, R., and Hubbell, S. (2019). Complete data from the Barro Colorado 50-ha plot: 423617 trees, 35 years

  15. [15]

    Cooley, J. W. and Tukey, J. W. (1965). An algorithm for the machine calculation of complex fourier series. Mathematics of computation , 19(90):297--301

  16. [16]

    and K \"u nsch, H

    Dahlhaus, R. and K \"u nsch, H. (1987). Edge effects and efficient parameter estimation for stationary random fields. Biometrika , 74(4):877--882

  17. [17]

    Daley, D. J. and Vere-Jones, D. (2003). An introduction to the theory of point processes: volume I: elementary theory and methods . Springer

  18. [18]

    J., Moraga, P., Rowlingson, B., and Taylor, B

    Diggle, P. J., Moraga, P., Rowlingson, B., and Taylor, B. M. (2013). Spatial and spatio-temporal log-gaussian C ox processes: extending the geostatistical paradigm. Statistical Science , 28(4):542--563

  19. [19]

    and Rokhlin, V

    Dutt, A. and Rokhlin, V. (1993). Fast F ourier transforms for nonequispaced data. SIAM Journal on Scientific computing , 14(6):1368--1393

  20. [20]

    and Mateu, J

    Eckardt, M. and Mateu, J. (2019a). Analysing multivariate spatial point processes with continuous marks: A graphical modelling approach. International Statistical Review , 87(1):44--67

  21. [21]

    A spatial dependence graph model for multivariate spatial hybrid processes

    Eckardt, M. and Mateu, J. (2019b). A spatial dependence graph model for multivariate spatial hybrid processes. arXiv preprint arXiv:1906.07798

  22. [22]

    Eriksson, J., Ollila, E., and Koivunen, V. (2010). Essential statistics and tools for complex random variables. IEEE Transactions on signal processing , 58(10):5400--5408

  23. [23]

    J., Olhede, S

    Fl \"u gge, A. J., Olhede, S. C., and Murrell, D. J. (2014). A method to detect subcommunities from multivariate spatial associations. Methods in Ecology and Evolution , 5(11):1214--1224

  24. [24]

    Goodman, N. R. (1963). Statistical analysis based on a certain multivariate complex G aussian distribution (an introduction). The Annals of mathematical statistics , 34(1):152--177

  25. [25]

    P., Sykulski, A

    Guillaumin, A. P., Sykulski, A. M., Olhede, S. C., and Simons, F. J. (2022). The debiased spatial W hittle likelihood. Journal of the Royal Statistical Society Series B: Statistical Methodology , 84(4):1526--1557

  26. [26]

    Halliday, D., Rosenberg, J., Amjad, A., Breeze, P., Conway, B., Farmer, S., et al. (1995). A framework for the analysis of mixed time series/point process data-theory and application to the study of physiological tremor, single motor unit discharges and electromyograms. Progress in biophysics and molecular biology , 64(2):237

  27. [27]

    and Hannan, E

    Hamon, B. and Hannan, E. (1974). Spectral estimation of time delay for dispersive and non-dispersive systems. Journal of the Royal Statistical Society Series C: Applied Statistics , 23(2):134--142

  28. [28]

    Hannan, E. J. and Thomson, P. J. (1971). The estimation of coherence and group delay. Biometrika , 58(3):469--481

  29. [29]

    Hanssen, A. (1997). Multidimensional multitaper spectral estimation. Signal Processing , 58(3):327--332

  30. [30]

    E., Condit, R., Hubbell, S

    Harms, K. E., Condit, R., Hubbell, S. P., and Foster, R. B. (2001). Habitat associations of trees and shrubs in a 50-ha neotropical forest plot. Journal of ecology , 89(6):947--959

  31. [31]

    Hubbell, S. P. and Foster, R. B. (1983). Diversity of canopy trees in a neotropical forest and implications for conservation. In Whitmore, T., Chadwick, A., and Sutton, A., editors, Tropical Rain Forest: Ecology and Management , pages 25--41. The British Ecological Society, Oxford

  32. [32]

    Hubbell, S. P. and Foster, R. B. (1986). Commonness and rarity in a neotropical forest: implications for tropical tree conservation. In Soule, M., editor, Conservation biology: the science of scarcity and diversity , pages 205--231. Sinauer Associates, Sunderland, MA

  33. [33]

    Jenkinson, M. (2003). Fast, automated, n-dimensional phase-unwrapping algorithm. Magnetic Resonance in Medicine: An Official Journal of the International Society for Magnetic Resonance in Medicine , 49(1):193--197

  34. [34]

    C., and Mugglestone, M

    Kanaan, M., Taylor, P. C., and Mugglestone, M. (2008). Cross-spectral properties of a spatial point-lattice process. Statistics & Probability Letters , 78(18):3238--3243

  35. [35]

    Katznelson, Y. (2004). An introduction to harmonic analysis . Cambridge University Press

  36. [36]

    Leonov, V. P. and Shiryaev, A. N. (1959). On a method of calculation of semi-invariants. Theory of Probability & Its Applications , 4(3):319--329

  37. [37]

    R., and Waagepetersen, R

    M ller, J., Syversveen, A. R., and Waagepetersen, R. P. (1998). Log G aussian C ox processes. Scandinavian journal of statistics , 25(3):451--482

  38. [38]

    Mugglestone, M. A. and Renshaw, E. (1996a). The exploratory analysis of bivariate spatial point patterns using cross-spectra. Environmetrics , 7(4):361--377

  39. [39]

    Mugglestone, M. A. and Renshaw, E. (1996b). A practical guide to the spectral analysis of spatial point processes. Computational Statistics & Data Analysis , 21(1):43--65

  40. [40]

    Percival, D. B. and Walden, A. T. (1993). Spectral Analysis for Physical Applications . C ambridge U niversity P ress

  41. [41]

    C., and Murrell, D

    Rajala, T., Olhede, S. C., and Murrell, D. J. (2019). When do we have the power to detect biological interactions in spatial point patterns? Journal of Ecology , 107(2):711--721

  42. [42]

    A., Olhede, S

    Rajala, T. A., Olhede, S. C., Grainger, J. P., and Murrell, D. J. (2023). What is the F ourier transform of a spatial point process? IEEE Transactions on Information Theory

  43. [43]

    Renshaw, E. (2002). Two-dimensional spectral analysis for marked point processes. Biometrical Journal: Journal of Mathematical Methods in Biosciences , 44(6):718--745

  44. [44]

    Riedel, K. S. and Sidorenko, A. (1995). Minimum bias multiple taper spectral estimation. IEEE Transactions on Signal Processing , 43(1):188--195

  45. [45]

    Simons, F. J. and Wang, D. V. (2011). Spatiospectral concentration in the cartesian plane. GEM-International Journal on Geomathematics , 2:1--36

  46. [46]

    Slepian, D. (1964). Prolate spheroidal wave functions, F ourier analysis and uncertainty— IV : extensions to many dimensions; generalized prolate spheroidal functions . Bell System Technical Journal , 43(6):3009--3057

  47. [47]

    and Stoyan, H

    Stoyan, D. and Stoyan, H. (1995). Fractals, random shapes and point fields : methods of geometrical statistics . Wiley series in probability and mathematical statistics. Applied probability and statistics. Wiley, Chichester [etc

  48. [48]

    Thomson, D. (1982). Spectrum estimation and harmonic analysis. Proceedings of the IEEE , 70(9):1055--1096

  49. [49]

    von Sachs, R. (2020). Nonparametric spectral analysis of multivariate time series. Annual Review of Statistics and Its Application , 7:361--386

  50. [50]

    Waagepetersen, R., Guan, Y., Jalilian, A., and Mateu, J. (2016). Analysis of multispecies point patterns by using multivariate log- G aussian C ox processes. Journal of the Royal Statistical Society: Series C (Applied Statistics) , 65(1):77--96

  51. [51]

    Walden, A. T. (2000). A unified view of multitaper multivariate spectral estimation. Biometrika , 87(4):767--788

  52. [52]

    Wishart, J. (1928). The generalised product moment distribution in samples from a normal multivariate population. Biometrika , pages 32--52

  53. [53]

    Young, W. H. (1912). On the multiplication of successions of F ourier constants. Proceedings of the Royal Society of London. Series A, Containing Papers of a Mathematical and Physical Character , 87(596):331--339