Paper Citation Record · LEDGER

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI

As of 18 August 2026, this Paper Citation Record lists 10 of 10 outbound references and 1 inbound Pith citation observation for arXiv:2505.02841.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2505.02841 v1

Coverage vector

measured 10 of 10 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-16T10:10:18.658434Z

measured 11 of 11 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-17T06:30:58.91139+00:00

measured 1 of 1 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links, observed 2026-08-15T20:56:22.568003Z

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: pith, observed 2026-08-16T12:16:17.039197Z

Reference resolution

10 of 10 outbound references displayed

verified exact0
verified fuzzy9
unresolved1
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation eca67846-4e57-420e-848b-e18762e47335 · outbound

This paper cites Reproducible bioinformatics project: A community for reproducible bioinformatics analysis pipelines.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI Reproducible bioinformatics project: A community for reproducible bioinformatics analysis pipelines

Reference 1

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T10:10:18.822839Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 7fb64fe6-5e28-4770-adbe-45cc6b727ae4 · outbound

This paper cites Ten simple rules for reproducible computational research.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI Ten simple rules for reproducible computational research

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T10:10:18.809398Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 28574cf5-3a90-486c-8658-c87741932f6d · outbound

This paper cites Sustainable data analysis with snakemake.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI Sustainable data analysis with snakemake

Reference 3

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T10:10:18.795446Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation c754a1dd-3e45-4f2d-9bfd-176192898c43 · outbound

This paper cites For long-term sustainable software in bioinformatics.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI For long-term sustainable software in bioinformatics

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T10:10:18.780998Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation d715475e-0164-4902-b3c6-f381dea7f267 · outbound

This paper cites Improving bioinformatics software quality through teamwork.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI Improving bioinformatics software quality through teamwork

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T10:10:18.766209Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 09dfdce5-48cd-41df-a035-04678b9f48b3 · outbound

This paper cites Take a Step Back: Evoking Reasoning via Abstraction in Large Language Models.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI Take a Step Back: Evoking Reasoning via Abstraction in Large Language Models

Reference 6

Resolution: unresolved; no resolver link, observed 2026-08-16T10:10:18.639684Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation fd650896-5920-4a53-be27-af458a6d363d · outbound

This paper cites A second step towards complexity-theoretic analogs of rice’s theorem.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI A second step towards complexity-theoretic analogs of rice’s theorem

Reference 7

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T10:10:18.752411Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation f7139402-0911-49d8-8686-4d0979aa856a · outbound

This paper cites Whitepaper on Prompt Engineering by Google.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI Whitepaper on Prompt Engineering by Google

Reference 8

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T10:10:18.737953Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 447d34c8-90c2-41bb-ba55-593bce8619af · outbound

This paper cites Text generation and prompting.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI Text generation and prompting

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T10:10:18.721646Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Observation 68c815fe-5bc6-4331-ad9a-216c0a2bf7a6 · outbound

This paper cites JSON Repair.

Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI JSON Repair

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-16T10:10:18.707474Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.

Pith citing papers

Observation c961608b-5b0f-4f55-90ac-eddb34e4014e · inbound

Compendium Manager: a tool for coordination of workflow management instances for bulk data processing in Python cites this paper.

Compendium Manager: a tool for coordination of workflow management instances for bulk data processing in Python Snakemaker: Seamlessly transforming ad-hoc analyses into sustainable Snakemake workflows with generative AI

Reference 2019

Resolution: metadata mismatch; local_arxiv, observed 2026-08-15T20:56:22.610202Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-17T06:30:58.91139+00:00.