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Paper Citation Record · LEDGER

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models

As of 9 August 2026, this Paper Citation Record lists 70 of 70 outbound references and 0 inbound Pith citation observations for arXiv:2506.04303.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2506.04303 v1

Coverage vector

measured 70 of 70 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-07T10:52:07.123692Z

measured 70 of 70 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-09T06:31:02.800959+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

70 of 70 outbound references displayed

  • verified exact0
  • verified fuzzy39
  • unresolved31
  • parse uncertain0
  • malformed identifier0
  • metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation eab2b6cc-123a-4ce0-9aee-4fd43e155370 · outbound

This paper cites Fatumo, T.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Fatumo, T

Reference 1

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.746754Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.933040Z digest=sha256:8d508e6854a3c00ffe7915bf7590574b05684312ee02bc2918a37d846389543b

Observation 751f9a20-3ec0-4d92-a794-1e0377ea4ea3 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 2

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.738460Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.936658Z digest=sha256:b7ab81e5f6f5309be3099076082ac5fd29436eef0f5a1505c7eb82e65e0c8d5a

Observation 6117c68b-3cd2-4c9f-940a-971e1dd7c5c1 · outbound

This paper cites Kolligundla, K.M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Kolligundla, K.M

Reference 3

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.730054Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.939700Z digest=sha256:7d08a1b5ff09af6d5b6720276a4414da59ebfeb179b74f89c9838f89d7990185

Observation 4b16f283-7c0a-47ce-8cab-28dfebcfe582 · outbound

This paper cites Houtekamer, M.C.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Houtekamer, M.C

Reference 4

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.722012Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.942958Z digest=sha256:99e6dbcb4bc23f2a9cfe53188d5f19d6dbd85142a3bdae6cef3c44950a166e2d

Observation 22540dde-7c03-4c0f-9f41-c6cffd1a2249 · outbound

This paper cites Zhou, J.G.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Zhou, J.G

Reference 5

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.713347Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.946374Z digest=sha256:d9e7e62bc9f274fcc9ed2340431a7d1f9563f53afddece07a05d18768b6e8eed

Observation d8843750-8b6d-43a9-b15b-d1dad67285bf · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 6

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.704795Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.949620Z digest=sha256:9d10f8337076b04d09f9fa1253f32ab76e3fcc8cbe4e6808c10976e71e66e519

Observation b3c89623-a77f-4d90-a111-d9a9fdd17209 · outbound

This paper cites Hoang, C.H.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Hoang, C.H

Reference 7

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.696229Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.952829Z digest=sha256:bfb0e51d1da148e55567fdab5a579f6ce7fda29c1106ffd216f5f905274ec1db

Observation 24661653-8ad6-49db-b543-af066c978995 · outbound

This paper cites Pickrell, J.C.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Pickrell, J.C

Reference 8

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.687811Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.955590Z digest=sha256:bc98442220541e8563290a8b59416f4374b16b0accae6659b7808fce6bfe2085

Observation 411bf383-d280-4791-9188-92380f2ca9d5 · outbound

This paper cites Parekh, Y.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Parekh, Y

Reference 9

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.679242Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.958257Z digest=sha256:7805f59e9b9614ae2aba1718451c33e73d7008c184883bb2cca38b92fa6c1f57

Observation 4ed88900-6652-4623-b316-d83859a69738 · outbound

This paper cites Lazzarotto, N.L.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Lazzarotto, N.L

Reference 10

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.671089Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.960974Z digest=sha256:be428f58cf5467fdef1607a7c840c6a141819ada7ee167639d20b98f7cd04e47

Observation 08f77746-03af-4e98-85b5-d4121f0c2e6e · outbound

This paper cites Kumar, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Kumar, S

Reference 11

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.662895Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.963507Z digest=sha256:1ddc7e8bac1bf722bed47572d2c65863bddb06d8cf2ba02e12613cc949e2f9db

Observation 43e47623-f1d0-4e7b-8814-4a1210ca843a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 12

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.654905Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.966247Z digest=sha256:bc8bb6d3fb97dd0073145cd8e2f765bf6654e7387bf7b55efb6186918617087b

Observation 1338a401-ebe6-476b-9658-c1ce075c7b7f · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 13

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.646703Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.969026Z digest=sha256:e13bd069e4d784eb0e29d479991ecd48aea964352d7478f919a19b1a2253b8f1

Observation a6a28a36-d0b7-4a2b-8c86-4d26639e520e · outbound

This paper cites Chang, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Chang, M

Reference 14

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.639078Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.971533Z digest=sha256:b106c12c60dade9b7f5915bb8df506300f1be750ab645c7b153afd575bff04d9

Observation 74051419-f93e-429f-bbf4-30e33fcaf8cc · outbound

This paper cites Subramanian, P.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Subramanian, P

Reference 15

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.631316Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.974179Z digest=sha256:7ba0f8b818dfe670dfea711a69ea017b155a94309009cd8efa50daf258517445

Observation 72611a54-17d9-4e7f-ab67-dd2e7e2a8b36 · outbound

This paper cites Liu, F.F.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Liu, F.F

Reference 16

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.623442Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.976943Z digest=sha256:e079ec9732415fd4e217eac63f55c6be377610b7a7714d496c166bf1dead30a9

Observation 9c34ecb1-1144-40ff-a431-ff5b9a7b4be5 · outbound

This paper cites Raudvere, L.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Raudvere, L

Reference 17

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.615795Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.979544Z digest=sha256:156f9cf4b191b11800ecdba284178c92f5674d3dec2060c3a1211b82cb5fb8c9

Observation b74c8112-d166-466e-bafb-0bd2eeb135b6 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 18

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.607948Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.982397Z digest=sha256:ab54352380c965683f025c2cb20d302d8eb634d46d15ad65cd07ed9087d34eec

Observation 2441987a-dde6-4426-8610-707a78e9ff7a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 19

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.599979Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.984963Z digest=sha256:f5c953e78ef3899e05808fbb5b14d750a89bfd9805430b0e5686c92d05e8490c

Observation 53b52ffa-d485-4b53-8199-1e4875bbf734 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 20

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.591559Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.987543Z digest=sha256:859d58e55e87da6b907612b58dd710776fb4610da1708d8c32ac6a0c99fc6ed7

Observation 67590e99-2cb0-4cef-abd0-26456c21e934 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 21

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.583220Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.990461Z digest=sha256:1f0bb4bf476e313db390522af7f94a7b1720e0479add502e4b8e4bdbb221a893

Observation 1a397366-502c-43b3-bd20-323cd3521643 · outbound

This paper cites GeneAgent: Self-verification Language Agent for Gene Set Knowledge Discovery using Domain Databases.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models GeneAgent: Self-verification Language Agent for Gene Set Knowledge Discovery using Domain Databases

Reference 22

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:06.993086Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:06.993086Z digest=sha256:46766b6b87af2facda75656fc5585b50850dc8204d922428888c08b73e8f1383

Observation eb9dbc84-de42-4cee-be14-fb8bb4e48862 · outbound

This paper cites Aravind, Guilt by association: contextual information in genome analysis.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Aravind, Guilt by association: contextual information in genome analysis

Reference 23

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.574609Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.996082Z digest=sha256:e57db0ae6370564c531f88d59f346e5ee0f692e031085c85f3d3aaad4092d559

Observation 877be535-3c6f-4c92-9830-6da8633bcd61 · outbound

This paper cites Mooney, J.T.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Mooney, J.T

Reference 24

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.565531Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:06.998952Z digest=sha256:de980b9860e5920452e22e0922a8253ea3d4ad91ae31cdabb245142f9c3c99a5

Observation 50f0eb36-8f6a-480f-b43f-f19621335da0 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 25

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.556874Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.001526Z digest=sha256:e397bcad1c98c4f9bc25166de7ef543a865c301f4287cd43d3bdd367b9e76e17

Observation 68a530fa-c545-4510-bfc0-4e7fecbd67ae · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 26

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.548883Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.004482Z digest=sha256:1152a123ba3026c73fc61738d3d14aeb49c57de1548744a38bc9985e6a4dff6d

Observation 7e58ac97-b0a6-47c1-a99a-ebe23c9dbe3c · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 27

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.540497Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.007372Z digest=sha256:39b358d26de4702059c6c7e8676fa44be3d9ef3377bfbcd05cbd0d4aaf58d0e4

Observation 73510a82-8a20-4056-b969-b29ce66d523a · outbound

This paper cites Romanovsky, K.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Romanovsky, K

Reference 28

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.531924Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.010413Z digest=sha256:bad0b12222ce51fa1c29d146ebd7dfe20c479767cd8ebb0cfe941d9f70cf0996

Observation a827951f-9d28-4b77-9980-c63e987a3f93 · outbound

This paper cites Eisfeld, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Eisfeld, S

Reference 29

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.523350Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.013259Z digest=sha256:a630560c8dfc9c6af18bed6cabe5d2976f37188831a149e61c96c01057664afa

Observation 6587f4e2-378b-474e-9f46-103716e2cf27 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 30

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.513943Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.016152Z digest=sha256:28c75d34e049bb26a96b41390f1d49473a5b349a6bc68400c1ea4b3a328d8f81

Observation ac282b93-3498-4649-928e-cdd6606e45ed · outbound

This paper cites Hirsch, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Hirsch, S

Reference 31

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.505455Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.018917Z digest=sha256:7c8b010c80ad3f6804a86199db5e4620a384e3febd555046a0810d04e585f443

Observation ecff437b-ff2d-4b75-b686-76cc690390ed · outbound

This paper cites Bassez, H.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Bassez, H

Reference 32

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.496261Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.021542Z digest=sha256:1d860cc40512fc08438c7d65e0667df8dc912a1902656e96d8c2fbd7124ac8bd

Observation ea78aed8-9e1a-4cd1-9a5c-97d0509e3965 · outbound

This paper cites Mering, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Mering, M

Reference 33

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.487676Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.024268Z digest=sha256:3fd25b82558c23e40e9b20a01dcb35ef9756edae8690911bee328d5d712999e8

Observation 3a6edbbb-9a02-4a51-afc4-33f5b7c46830 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 34

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.478910Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.026977Z digest=sha256:213217c34a36673c9ef6d2d9e8dcb9be40cbb0ffc83203d30746639b27fd9c87

Observation 3bee5951-80cb-47fc-b7b3-2a2e483521eb · outbound

This paper cites GPT-4o System Card.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models GPT-4o System Card

Reference 35

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.029528Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.029528Z digest=sha256:4e73a50af71104cf1e200f7b87b37de84b3d55cf287a4e788d6d34d23fb9e955

Observation ec2e8563-3492-4315-809e-b3510519c77e · outbound

This paper cites Jayakrishnan, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Jayakrishnan, M

Reference 36

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.470369Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.032515Z digest=sha256:26d40a68f0552ba8d40366291019c2fcd89189585996c2a6bb70886f7d7d72bb

Observation 4c39b1fc-afd7-4d75-a2f0-a6b3b24b9fc9 · outbound

This paper cites Porcu, M.C.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Porcu, M.C

Reference 37

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.461509Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.035350Z digest=sha256:b49e1dbb629b0ee59033a119a98d9846b3d52991a2c093d039c379871dc1a96b

Observation c6a7030c-b9c5-4421-82c3-2370aa7fc553 · outbound

This paper cites GPT-4 Technical Report.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models GPT-4 Technical Report

Reference 38

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.037911Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.037911Z digest=sha256:7c7b909870ef1dec0502d217c370a9c53b852c96655721628b8142b44166b351

Observation 35820cca-a0df-4df9-86d7-65aa6630df4b · outbound

This paper cites The Llama 3 Herd of Models.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models The Llama 3 Herd of Models

Reference 39

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.040618Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.040618Z digest=sha256:3088e97121f13ef37138e93c5878dbf8ff6c3bf9bc2d838eea0cd00cc3103051

Observation ce7aefaa-5e78-4265-b5bd-050a1a5c4ea8 · outbound

This paper cites Joachimiak, J.H.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Joachimiak, J.H

Reference 40

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.453353Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.043304Z digest=sha256:0191f6f1926a23ac7725f3e712f2c4a1d848481f0ed1ed197484f5b0334053a9

Observation ba0a6b09-4613-4c80-a2cd-b48519d9a5af · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 41

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.444835Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.046136Z digest=sha256:99f84c36720dda98a0b7e83a0f4e3b38fa6dc715cbb00e252fa98b511f281497

Observation 0931df51-f65d-4cd8-9e56-5ad9d1cd0d54 · outbound

This paper cites Tanaka, M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Tanaka, M

Reference 42

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.436938Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.048674Z digest=sha256:105016d5e1b5f8967dad1fa09e4e3a5b346d72ca52c743d7054563ec783d881d

Observation 35ff1bc3-8b85-4f4a-ac53-a7d447bde5b3 · outbound

This paper cites Rambow, A.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Rambow, A

Reference 43

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.428694Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.051331Z digest=sha256:997f07eadd26b9c83af037414ed35ff267901cb29f23cbdc001058bf3faecc51

Observation 22811249-07fe-4e8d-9872-f9dd3d66c29a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 44

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.419872Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.054073Z digest=sha256:13600180edcd94d1bcd703b38f105d5bfb43ccd5037659a1c442637207083486

Observation 258f1c36-e779-4390-b144-08a03704110b · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 45

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.411436Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.056939Z digest=sha256:da2b7ce4d70268c6a51fb100cec59a09618c83ee75f8c546402c663570480127

Observation 0d4ecf6a-e591-4937-8093-9ee57467a788 · outbound

This paper cites Griffiths, P.A.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Griffiths, P.A

Reference 46

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.402730Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.059408Z digest=sha256:e0f9229b9f12ff7ed3c5e5060639af7ce3d1f3f9f8376f324c9bb73cd33f5c18

Observation 691a53c9-b460-4287-a73a-6ee7c936a5d9 · outbound

This paper cites Goenka, F.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Goenka, F

Reference 47

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.394575Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.062065Z digest=sha256:47d91929259466cc3b769bbef3776fb3f317d7c080586041115fe1e8da96f29d

Observation fd01fca6-1912-4261-aa9d-212fa51103bd · outbound

This paper cites Böttcher, E.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Böttcher, E

Reference 48

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.386238Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.064738Z digest=sha256:4542f5dd7deb46029981518b5eb2fcf5d6f1f6ee21027eb962f5acd764603cfb

Observation ce76a784-9656-46ba-9dfa-9633b36a6ef7 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 49

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.377671Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.067480Z digest=sha256:9afadeb352ee3009235f5c58ec92f2079428ec0c1be7d07054467255708fb2be

Observation af874769-ca83-4cf0-9ec9-a397fa4b7794 · outbound

This paper cites Habara, Y.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Habara, Y

Reference 50

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.369136Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.070061Z digest=sha256:ee3239a9bfb7784f02702d3203f2d8179944dcb1262bc5adaf9017a26ea6854b

Observation e6fe6b3b-557b-4a05-a355-7597bd28c2dc · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 51

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.360185Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.072727Z digest=sha256:e1c41c8237b9c52fdccb275af421e97c9665b254a996670bfc92e84f4c3b2980

Observation 67a83495-e653-41a2-8edc-b4929d89f19f · outbound

This paper cites McCulloch, G.R.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models McCulloch, G.R

Reference 52

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.351905Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.075462Z digest=sha256:4f6956e242187e1c00982ccdd844c2e63babcd991afc8240e2d8e4ad5884605b

Observation a5649570-972e-4323-811d-37e2d2ef0f6d · outbound

This paper cites Jie, C.J.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Jie, C.J

Reference 53

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.342971Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.078372Z digest=sha256:4a3b44569eda2a97c6fbc1d4b2ad72c4bcd7457a0f1d5dd38f66c7a4e815f25a

Observation 8af303b1-d9b3-4358-aa74-98bac4dbab9a · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 54

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.334330Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.080960Z digest=sha256:df901ea65971684411da047d25edc09d2608390b40e5ddb0cf074908fe10da5e

Observation 30701ab6-8787-4c9e-9def-faf516a603cd · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 55

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.325906Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.083659Z digest=sha256:95ed74ababf1c6150f69824d7a2418f7dcbc54a570053c1e34fc7d006d758113

Observation b51bdda8-6a9d-46af-beca-02ab6b2b5c53 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 56

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.317555Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.086097Z digest=sha256:6c29c8479943d3a7482065e23b413e6df195132408803202caa89a8b70531c0b

Observation e7d46aa5-caa6-4429-81e7-a570e59c475c · outbound

This paper cites Bradley, TNF‐mediated inflammatory disease.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Bradley, TNF‐mediated inflammatory disease

Reference 57

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.309097Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.088633Z digest=sha256:a2aa2664d37607e5685e3515b2b98b05fb58ea612257157293a778bb263b7f35

Observation 3fea77cd-ac2b-4b3f-b09d-263bea05fb64 · outbound

This paper cites Beutler, A.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Beutler, A

Reference 58

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.300909Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.091304Z digest=sha256:1b02ccff0b9ea1058dcfa1832df23a4078faacacc864422d814155c4461e4f84

Observation ab10fa17-0d83-404a-8c0f-07d8ac50ae88 · outbound

This paper cites Yamamoto, S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Yamamoto, S

Reference 59

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.292399Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.093800Z digest=sha256:b0f35d6fb49661e3c48b41b40ebe1690c6517651bab540d980607353ee01eba4

Observation b217fde1-2f97-4278-9b02-2af1cd12b7cd · outbound

This paper cites Zhu, J.M.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Zhu, J.M

Reference 60

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.283509Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.096361Z digest=sha256:1ba47b870120d4f01050818e554d9b74015ebb6a235c6752a7e186099202701d

Observation 6ac6efc7-a4c4-4e15-ba4b-bd613a18ffc4 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 61

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.275162Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.099177Z digest=sha256:52effeabcd5e70008f7f13edce4f63d6a17951e7aa2e52c001194d5ab1fd08af

Observation 91e44ba3-babd-452d-bc9c-80e0e2f93787 · outbound

This paper cites Opportunities and Risks of LLMs for Scalable Deliberation with Polis.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Opportunities and Risks of LLMs for Scalable Deliberation with Polis

Reference 62

Resolution
unresolved
no resolver link, observed 2026-08-07T10:52:07.101720Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

source=pdf_text observed=2026-08-07T10:52:07.101720Z digest=sha256:9e66560b39b93c439b63f8ba3d9a296e852305692a624311603eaaae14e0afd7

Observation a79480ba-4d89-40f6-a85a-0a73483c067c · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 63

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.266113Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.104544Z digest=sha256:607fa8f4294f4d4b5d75ca6487c8a4ffd6521344ad86238cc04453916c337b71

Observation 3217b7ec-2ddc-49e0-af63-22ef3c766e88 · outbound

This paper cites Abbasi Yadkori, I.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Abbasi Yadkori, I

Reference 64

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.257623Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.107231Z digest=sha256:c7fde0856f090adbd750c4e17d8491fffa736aa590151c22e60991417e156db6

Observation 1630f15b-55d4-4c7d-ace8-a6cab24444e1 · outbound

This paper cites Azure OpenAI in Azure AI Foundry Models [Internet].

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Azure OpenAI in Azure AI Foundry Models [Internet]

Reference 65

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.248107Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.110138Z digest=sha256:5b3dcd57470e38951332fea7332afd6a8a1138ca53ec445e333d107307c6b3fd

Observation f3f7c2f3-f749-4db7-890f-44083b0b83b0 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 66

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.238413Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.112804Z digest=sha256:14655f8aeb4ec0190b21bccffa7db2cbd7a68d87c585729e8442b0d843c6b47c

Observation e165d2a0-7d0c-47a7-a1ef-8132f5d1d04f · outbound

This paper cites Razin, E.S.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Razin, E.S

Reference 67

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.229489Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.115368Z digest=sha256:a89f43e14719429d6e45393f4bf05576ec611d0d81219ea3ec37b165fdbb49a9

Observation ac829ed4-d2b2-45b1-bf61-441a594c6bdc · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 68

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.220529Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.118144Z digest=sha256:4a5316ddead94a96e745d108091d57853ed1955c3f3afde1072ebf5c7df73612

Observation 0851820e-c76a-4c1a-a440-e03f06afcae3 · outbound

This paper cites an unresolved cited work.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models Unresolved cited work

Reference 69

Resolution
unresolved
raw_fallback, observed 2026-08-07T10:52:07.211658Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.120963Z digest=sha256:d263d117b91de9f492d969cb6cdbb1058f5fa3c65a04e3fb8e46156239b77589

Observation 8b6cbf0f-9f41-44d0-970c-af4e05444a45 · outbound

This paper cites **” indicates a significant improvement with p < 0.01, while “ *.

Knowledge-guided Contextual Gene Set Analysis Using Large Language Models **” indicates a significant improvement with p < 0.01, while “ *

Reference 70

Resolution
verified fuzzy
raw_fallback, observed 2026-08-07T10:52:07.202109Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.

source=pdf_text observed=2026-08-07T10:52:07.123692Z digest=sha256:452fd962b741cc6487a61528933af6a71174abb1f108f5cb3fc369c749db1d96

Pith citing papers

No inbound Pith citation observations are available.