An Auditable Agent Platform For Automated Molecular Optimisation | Paper Citation Record

Observation c124be1f-555b-423b-a9ef-71282fa31252 · outbound

This paper cites Machine learning-aided generative molecular design.

An Auditable Agent Platform For Automated Molecular Optimisation Machine learning-aided generative molecular design

Reference 1

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Observation d8f9dc9c-b4e5-4cac-82f9-b3de07bb7c68 · outbound

This paper cites From understanding diseases to drug design: can artificial intelligence bridge the gap? Artificial Intelligence Review , 57(4):86, 2024.

An Auditable Agent Platform For Automated Molecular Optimisation From understanding diseases to drug design: can artificial intelligence bridge the gap? Artificial Intelligence Review , 57(4):86, 2024

Reference 2

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Observation 4c3ba3fb-c587-4304-b3d3-a488017f5160 · outbound

This paper cites Application of artificial intelligence in drug design: A review.

An Auditable Agent Platform For Automated Molecular Optimisation Application of artificial intelligence in drug design: A review

Reference 3

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Observation 674b222c-df4f-4bbd-a32e-ff60a131354d · outbound

This paper cites A survey of generative ai for de novo drug design: new frontiers in molecule and protein generation.

An Auditable Agent Platform For Automated Molecular Optimisation A survey of generative ai for de novo drug design: new frontiers in molecule and protein generation

Reference 4

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Observation 1f539bbf-c614-437d-bdd6-65b905d1bdb9 · outbound

This paper cites Machine-learning-assisted molecular design of innovative polymers.

An Auditable Agent Platform For Automated Molecular Optimisation Machine-learning-assisted molecular design of innovative polymers

Reference 5

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Observation ef66a5bd-3b72-4f48-98b4-22468879790c · outbound

This paper cites Orchestrating tool ecosystem of drug discovery with intention-aware llm agents.

An Auditable Agent Platform For Automated Molecular Optimisation Orchestrating tool ecosystem of drug discovery with intention-aware llm agents

Reference 6

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Observation d1996e47-fb5e-4dc7-93fa-ca687d083b45 · outbound

This paper cites DrugPilot: LLM-based Parameterized Reasoning Agent for Drug Discovery.

An Auditable Agent Platform For Automated Molecular Optimisation DrugPilot: LLM-based Parameterized Reasoning Agent for Drug Discovery

Reference 7

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Observation 4e88417e-894c-4a25-9ab9-3a330661d5ea · outbound

This paper cites Ai-enabled language models (lms) to large language models (llms) and multimodal large language models (mllms) in drug discovery and development.

An Auditable Agent Platform For Automated Molecular Optimisation Ai-enabled language models (lms) to large language models (llms) and multimodal large language models (mllms) in drug discovery and development

Reference 8

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Observation d2bcb378-9aed-4309-beae-ac76c5d74e25 · outbound

This paper cites Artificial intelligence in drug development.

An Auditable Agent Platform For Automated Molecular Optimisation Artificial intelligence in drug development

Reference 9

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Observation f0672a28-ee06-41c5-b28f-b7fbadd6a1d3 · outbound

This paper cites A breakthrough in r&d for neglected diseases: new ways to get the drugs we need.

An Auditable Agent Platform For Automated Molecular Optimisation A breakthrough in r&d for neglected diseases: new ways to get the drugs we need

Reference 10

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Observation 4095092c-d93c-4c18-af34-ab7c2b53041c · outbound

This paper cites Ai with agency: a vision for adaptive, efficient, and ethical healthcare.

An Auditable Agent Platform For Automated Molecular Optimisation Ai with agency: a vision for adaptive, efficient, and ethical healthcare

Reference 11

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Observation 4c5bde8b-2ae1-45cc-ad8a-65ee257fad74 · outbound

This paper cites Drug target selection and validation.

An Auditable Agent Platform For Automated Molecular Optimisation Drug target selection and validation

Reference 12

Resolution: unresolved; no resolver link, observed 2026-08-06T04:32:27.345975Z

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Observation 2d9982c2-1a17-4123-bac9-f9af4036d731 · outbound

This paper cites Pharmacophore modeling and its applications.

An Auditable Agent Platform For Automated Molecular Optimisation Pharmacophore modeling and its applications

Reference 13

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Observation d9f86811-9efe-4a92-a1c7-e41c72f599e6 · outbound

This paper cites Peptide-based drug discovery through artificial intelligence: towards an autonomous design of therapeutic peptides.

An Auditable Agent Platform For Automated Molecular Optimisation Peptide-based drug discovery through artificial intelligence: towards an autonomous design of therapeutic peptides

Reference 14

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Observation d42cab7f-3a49-4e1a-9f04-484709458b10 · outbound

This paper cites Artificial intelligence and machine learning-aided drug discovery in central nervous system diseases: State-of-the-arts and future directions.

An Auditable Agent Platform For Automated Molecular Optimisation Artificial intelligence and machine learning-aided drug discovery in central nervous system diseases: State-of-the-arts and future directions

Reference 15

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Observation 428f58a9-661f-40cf-ac9b-b55ffb650b6d · outbound

This paper cites Ai-driven drug discovery for rare diseases.

An Auditable Agent Platform For Automated Molecular Optimisation Ai-driven drug discovery for rare diseases

Reference 16

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Observation c586e06b-73e5-46a3-8d56-7e668815a75e · outbound

This paper cites Patient-centric knowledge graphs: a survey of current methods, challenges, and applications.

An Auditable Agent Platform For Automated Molecular Optimisation Patient-centric knowledge graphs: a survey of current methods, challenges, and applications

Reference 17

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Observation d1c59823-d2dd-44c4-9de9-a568ac59d05b · outbound

This paper cites In-Context Learning with Long-Context Models: An In-Depth Exploration.

An Auditable Agent Platform For Automated Molecular Optimisation In-Context Learning with Long-Context Models: An In-Depth Exploration

Reference 18

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Observation 948f4c53-c75b-4cd0-b036-869be34266a9 · outbound

This paper cites An Information-Theoretic Analysis of In-Context Learning.

An Auditable Agent Platform For Automated Molecular Optimisation An Information-Theoretic Analysis of In-Context Learning

Reference 19

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Observation 8fb8f295-1be3-4bcd-b20d-4ad061cde1bd · outbound

This paper cites SynerGPT: In-Context Learning for Personalized Drug Synergy Prediction and Drug Design.

An Auditable Agent Platform For Automated Molecular Optimisation SynerGPT: In-Context Learning for Personalized Drug Synergy Prediction and Drug Design

Reference 20

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Observation cfaaed45-537c-4f3d-88f3-1193fa2d9d84 · outbound

This paper cites A Survey on In-context Learning.

An Auditable Agent Platform For Automated Molecular Optimisation A Survey on In-context Learning

Reference 21

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Observation 35ec141e-f3ed-48a9-aaba-69d58616ff23 · outbound

This paper cites Improving drug-drug interaction prediction via in-context learning and judging with large language models.

An Auditable Agent Platform For Automated Molecular Optimisation Improving drug-drug interaction prediction via in-context learning and judging with large language models

Reference 22

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Observation 0094f9f3-eb12-4150-b96b-e7637ece6e85 · outbound

This paper cites Mhnfs: Prompting in-context bioactivity predictions for low-data drug discovery.

An Auditable Agent Platform For Automated Molecular Optimisation Mhnfs: Prompting in-context bioactivity predictions for low-data drug discovery

Reference 23

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Observation cfe0e988-209b-4e2f-95b5-81be3b72ef66 · outbound

This paper cites The virtual lab: Ai agents design new sars-cov-2 nanobodies with experimental validation.

An Auditable Agent Platform For Automated Molecular Optimisation The virtual lab: Ai agents design new sars-cov-2 nanobodies with experimental validation

Reference 24

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Observation ec468965-532d-4a7c-ac3c-1d1fa2d68ace · outbound

This paper cites The AI Scientist: Towards Fully Automated Open-Ended Scientific Discovery.

An Auditable Agent Platform For Automated Molecular Optimisation The AI Scientist: Towards Fully Automated Open-Ended Scientific Discovery

Reference 25

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Observation 6db64530-5955-4034-a588-51ddd056d1a3 · outbound

This paper cites Towards an AI co-scientist.

An Auditable Agent Platform For Automated Molecular Optimisation Towards an AI co-scientist

Reference 26

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Observation 7461b735-ccf0-4d4d-9117-930bcdd76423 · outbound

This paper cites AlphaEvolve: A coding agent for scientific and algorithmic discovery.

An Auditable Agent Platform For Automated Molecular Optimisation AlphaEvolve: A coding agent for scientific and algorithmic discovery

Reference 27

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Observation 80f230ee-eecb-4e52-b148-cd867b81ab4a · outbound

This paper cites A Survey on Test-Time Scaling in Large Language Models: What, How, Where, and How Well?.

An Auditable Agent Platform For Automated Molecular Optimisation A Survey on Test-Time Scaling in Large Language Models: What, How, Where, and How Well?

Reference 28

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Observation e7ffaf7b-b73b-4c7b-9c88-02c2d65643b7 · outbound

This paper cites Large language models in drug discovery: A comprehensive analysis of drug-target interaction prediction.

An Auditable Agent Platform For Automated Molecular Optimisation Large language models in drug discovery: A comprehensive analysis of drug-target interaction prediction

Reference 29

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Observation ca0a6169-d77b-4e5a-8967-a101139c4cd7 · outbound

This paper cites Augmenting dmta using predictive ai modelling at astrazeneca.

An Auditable Agent Platform For Automated Molecular Optimisation Augmenting dmta using predictive ai modelling at astrazeneca

Reference 30

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Observation 043714cc-6f58-4475-8c4f-ac0dfbbf3ecf · outbound

This paper cites Bran, Sam Cox, Oliver Schilter, Carlo Baldassari, Andrew D White, and Philippe Schwaller.

An Auditable Agent Platform For Automated Molecular Optimisation Bran, Sam Cox, Oliver Schilter, Carlo Baldassari, Andrew D White, and Philippe Schwaller

Reference 31

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:39.288529Z

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No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 3aeda90a-29e6-4e03-8d72-c02d391caf9a · outbound

This paper cites Aviary: training language agents on challenging scientific tasks.

An Auditable Agent Platform For Automated Molecular Optimisation Aviary: training language agents on challenging scientific tasks

Reference 32

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Observation 4c453b0b-53ba-43e7-bd97-fc4116d15287 · outbound

This paper cites Toolformer: Language models can teach themselves to use tools.

An Auditable Agent Platform For Automated Molecular Optimisation Toolformer: Language models can teach themselves to use tools

Reference 33

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This paper cites API-BLEND: A Comprehensive Corpora for Training and Benchmarking API LLMs.

An Auditable Agent Platform For Automated Molecular Optimisation API-BLEND: A Comprehensive Corpora for Training and Benchmarking API LLMs

Reference 34

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Observation 6027aeaa-e590-4ead-9a12-ed50948c7ba9 · outbound

This paper cites ToolLLM: Facilitating Large Language Models to Master 16000+ Real-world APIs.

An Auditable Agent Platform For Automated Molecular Optimisation ToolLLM: Facilitating Large Language Models to Master 16000+ Real-world APIs

Reference 35

Resolution: unresolved; no resolver link, observed 2026-08-06T04:32:28.990431Z

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Observation 6e526746-371d-48a6-91d8-adaa08c3aff9 · outbound

This paper cites MATHSENSEI: A Tool-Augmented Large Language Model for Mathematical Reasoning.

An Auditable Agent Platform For Automated Molecular Optimisation MATHSENSEI: A Tool-Augmented Large Language Model for Mathematical Reasoning

Reference 36

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This paper cites ART: Automatic multi-step reasoning and tool-use for large language models.

An Auditable Agent Platform For Automated Molecular Optimisation ART: Automatic multi-step reasoning and tool-use for large language models

Reference 37

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Observation 64678d6f-76f2-4e4d-83a1-2c07274884e9 · outbound

This paper cites Cactus: Chemistry agent connecting tool usage to science.

An Auditable Agent Platform For Automated Molecular Optimisation Cactus: Chemistry agent connecting tool usage to science

Reference 38

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Observation 81adc328-48a8-44f1-b554-884c4700ca82 · outbound

This paper cites SciAgent: Tool-augmented Language Models for Scientific Reasoning.

An Auditable Agent Platform For Automated Molecular Optimisation SciAgent: Tool-augmented Language Models for Scientific Reasoning

Reference 39

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Observation deddcd2c-6702-4ba9-a9d8-a4c0a258cc43 · outbound

This paper cites PharmAgents: Building a Virtual Pharma with Large Language Model Agents.

An Auditable Agent Platform For Automated Molecular Optimisation PharmAgents: Building a Virtual Pharma with Large Language Model Agents

Reference 40

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Observation 33a08723-e2c8-4b08-a272-0beb77f8a794 · outbound

This paper cites Protagents: protein discovery via large language model multi-agent collaborations combining physics and machine learning.

An Auditable Agent Platform For Automated Molecular Optimisation Protagents: protein discovery via large language model multi-agent collaborations combining physics and machine learning

Reference 41

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Observation 20b8efd6-9b2a-44a0-872b-0878e43ea21e · outbound

This paper cites Agent Laboratory: Using LLM Agents as Research Assistants.

An Auditable Agent Platform For Automated Molecular Optimisation Agent Laboratory: Using LLM Agents as Research Assistants

Reference 42

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Observation 05777897-660a-4ffe-8bc5-047e0a722595 · outbound

This paper cites A survey on llm-based multi-agent systems: workflow, infrastructure, and challenges.

An Auditable Agent Platform For Automated Molecular Optimisation A survey on llm-based multi-agent systems: workflow, infrastructure, and challenges

Reference 43

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:38.672440Z

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Observation abe3e0c5-3775-49c3-9e6b-8153ae842541 · outbound

This paper cites LLM Multi-Agent Systems: Challenges and Open Problems.

An Auditable Agent Platform For Automated Molecular Optimisation LLM Multi-Agent Systems: Challenges and Open Problems

Reference 44

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Observation 8ddfc573-16eb-4553-ac1a-23aebb1bf453 · outbound

This paper cites A Survey on Context-Aware Multi-Agent Systems: Techniques, Challenges and Future Directions.

An Auditable Agent Platform For Automated Molecular Optimisation A Survey on Context-Aware Multi-Agent Systems: Techniques, Challenges and Future Directions

Reference 45

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Observation 00beac76-c131-4a61-a589-0c62569e80ec · outbound

This paper cites Cooperative intelligent control of multi-agent systems (mas) through communication, trust, and reliability.

An Auditable Agent Platform For Automated Molecular Optimisation Cooperative intelligent control of multi-agent systems (mas) through communication, trust, and reliability

Reference 46

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:38.519170Z

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Observation 284e3f26-d90a-4f02-a1e7-ef637712f02a · outbound

This paper cites Multi-agent systems and their applications.

An Auditable Agent Platform For Automated Molecular Optimisation Multi-agent systems and their applications

Reference 47

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:38.320884Z

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No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 26583386-0d01-4639-924c-23d2acbf6878 · outbound

This paper cites Online planning for multi-agent systems with bounded communication.

An Auditable Agent Platform For Automated Molecular Optimisation Online planning for multi-agent systems with bounded communication

Reference 48

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:38.181281Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation b6d65f93-6516-4a5a-901e-4cc2dafc34de · outbound

This paper cites Multi-Agent Coordination across Diverse Applications: A Survey.

An Auditable Agent Platform For Automated Molecular Optimisation Multi-Agent Coordination across Diverse Applications: A Survey

Reference 49

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An Auditable Agent Platform For Automated Molecular Optimisation Advancing Multi-Agent Systems Through Model Context Protocol: Architecture, Implementation, and Applications

Reference 50

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An Auditable Agent Platform For Automated Molecular Optimisation Agent-Oriented Planning in Multi-Agent Systems

Reference 51

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An Auditable Agent Platform For Automated Molecular Optimisation Multi-Agent Collaboration Mechanisms: A Survey of LLMs

Reference 52

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Observation c55d7b56-9db2-4339-af3e-062627d70d7e · outbound

This paper cites Autogen: Enabling next-gen llm applications via multi-agent conversations.

An Auditable Agent Platform For Automated Molecular Optimisation Autogen: Enabling next-gen llm applications via multi-agent conversations

Reference 53

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:37.997746Z

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Observation 7c940ea7-b0e8-4fe1-8d74-9cbc4dfe012f · outbound

This paper cites an unresolved cited work.

An Auditable Agent Platform For Automated Molecular Optimisation Unresolved cited work

Reference 54

Resolution: unresolved; raw_fallback, observed 2026-08-06T04:32:37.840129Z

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Observation f9225a09-0819-42f9-a052-886995119f6a · outbound

This paper cites Multi-agent systems: A survey about its components, framework and workflow.

An Auditable Agent Platform For Automated Molecular Optimisation Multi-agent systems: A survey about its components, framework and workflow

Reference 55

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:37.677087Z

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Observation d5e6eb85-fc47-44bc-b14a-556898ed795c · outbound

This paper cites A hierarchical design framework for distributed control of multi-agent systems.

An Auditable Agent Platform For Automated Molecular Optimisation A hierarchical design framework for distributed control of multi-agent systems

Reference 56

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:37.473728Z

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Observation 481cbf93-c8a2-4427-8baa-9bc6ad85050f · outbound

This paper cites AgentNet: Decentralized Evolutionary Coordination for LLM-based Multi-Agent Systems.

An Auditable Agent Platform For Automated Molecular Optimisation AgentNet: Decentralized Evolutionary Coordination for LLM-based Multi-Agent Systems

Reference 57

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Observation 18f19a35-a2ce-4242-a479-c9af09005d0e · outbound

This paper cites PC-Agent: A Hierarchical Multi-Agent Collaboration Framework for Complex Task Automation on PC.

An Auditable Agent Platform For Automated Molecular Optimisation PC-Agent: A Hierarchical Multi-Agent Collaboration Framework for Complex Task Automation on PC

Reference 58

Resolution: unresolved; no resolver link, observed 2026-08-06T04:32:30.329870Z

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Observation ea91a5a6-5c2b-408c-9e4e-ca552305134f · outbound

This paper cites A dynamic llm-powered agent network for task-oriented agent collaboration.

An Auditable Agent Platform For Automated Molecular Optimisation A dynamic llm-powered agent network for task-oriented agent collaboration

Reference 59

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:37.300347Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 47eac6f5-16c5-41df-89b7-5e4f098dc95b · outbound

This paper cites Scaling Large Language Model-based Multi-Agent Collaboration.

An Auditable Agent Platform For Automated Molecular Optimisation Scaling Large Language Model-based Multi-Agent Collaboration

Reference 60

Resolution: unresolved; no resolver link, observed 2026-08-06T04:32:30.338018Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 24454059-ca8f-4fec-bfd4-366abf3be409 · outbound

This paper cites Nucleic acids research , 53(D1):D609--D617, 2025.

An Auditable Agent Platform For Automated Molecular Optimisation Nucleic acids research , 53(D1):D609--D617, 2025

Reference 61

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:37.157305Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation b159cb79-34d1-4045-901d-f6a1a292b642 · outbound

This paper cites Updated resources for exploring experimentally-determined pdb structures and computed structure models at the rcsb protein data bank.

An Auditable Agent Platform For Automated Molecular Optimisation Updated resources for exploring experimentally-determined pdb structures and computed structure models at the rcsb protein data bank

Reference 62

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:36.992686Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 712a9bac-90f1-4bd6-9649-dfaf023aa197 · outbound

This paper cites Fifteen years of chembl and its role in cheminformatics and drug discovery.

An Auditable Agent Platform For Automated Molecular Optimisation Fifteen years of chembl and its role in cheminformatics and drug discovery

Reference 63

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:36.841824Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation cbc62d43-aef0-4f65-90e9-90dc18e72ae4 · outbound

This paper cites Rdkit documentation.

An Auditable Agent Platform For Automated Molecular Optimisation Rdkit documentation

Reference 64

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:36.671998Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 54b22f8c-8680-4c5f-9df6-9255385f3bdb · outbound

This paper cites an unresolved cited work.

An Auditable Agent Platform For Automated Molecular Optimisation Unresolved cited work

Reference 65

Resolution: unresolved; raw_fallback, observed 2026-08-06T04:32:36.493077Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 966200cd-fd08-45cd-995f-b07cd9cef408 · outbound

This paper cites Autodock vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading.

An Auditable Agent Platform For Automated Molecular Optimisation Autodock vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading

Reference 66

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:36.305676Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation bfd7ea24-4dea-4667-ba7a-447105c9ca89 · outbound

This paper cites Plip: fully automated protein--ligand interaction profiler.

An Auditable Agent Platform For Automated Molecular Optimisation Plip: fully automated protein--ligand interaction profiler

Reference 67

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:36.160746Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation d4573c1d-7f28-46f8-8211-a44bd8c5e584 · outbound

This paper cites Alphafold protein structure database in 2024: providing structure coverage for over 214 million protein sequences.

An Auditable Agent Platform For Automated Molecular Optimisation Alphafold protein structure database in 2024: providing structure coverage for over 214 million protein sequences

Reference 68

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:36.021235Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 68010e7c-6d43-43b7-940b-bdd0c9d3250a · outbound

This paper cites Quantifying the chemical beauty of drugs.

An Auditable Agent Platform For Automated Molecular Optimisation Quantifying the chemical beauty of drugs

Reference 69

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:35.889576Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 1f33d95f-6b63-4677-821f-3d5a2df669b4 · outbound

This paper cites Estimation of synthetic accessibility score of drug-like molecules based on molecular complexity and fragment contributions.

An Auditable Agent Platform For Automated Molecular Optimisation Estimation of synthetic accessibility score of drug-like molecules based on molecular complexity and fragment contributions

Reference 70

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:35.729704Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation f3dbba2a-6a49-48b4-9b40-cbfe9eb06a5c · outbound

This paper cites Can large language models explore in-context? Advances in Neural Information Processing Systems , 37:120124--120158, 2024.

An Auditable Agent Platform For Automated Molecular Optimisation Can large language models explore in-context? Advances in Neural Information Processing Systems , 37:120124--120158, 2024

Reference 71

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:35.487706Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 8a46407a-9654-489f-b057-c518f205e48e · outbound

This paper cites Transfer-Prompting: Enhancing Cross-Task Adaptation in Large Language Models via Dual-Stage Prompts Optimization.

An Auditable Agent Platform For Automated Molecular Optimisation Transfer-Prompting: Enhancing Cross-Task Adaptation in Large Language Models via Dual-Stage Prompts Optimization

Reference 72

Resolution: verified exact; local_arxiv, observed 2026-08-06T04:32:30.606536Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation bfba1236-9f15-4436-8e5c-85856d5dc69c · outbound

This paper cites Evaluating the Prompt Steerability of Large Language Models.

An Auditable Agent Platform For Automated Molecular Optimisation Evaluating the Prompt Steerability of Large Language Models

Reference 73

Resolution: unresolved; no resolver link, observed 2026-08-06T04:32:30.391727Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation b7550139-4b36-4e64-8752-7f084cc1f323 · outbound

This paper cites Comparative analysis of prompt strategies for large language models: Single-task vs.

An Auditable Agent Platform For Automated Molecular Optimisation Comparative analysis of prompt strategies for large language models: Single-task vs

Reference 74

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:35.305431Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 41766698-c8b5-4ace-bf00-58fa815af857 · outbound

This paper cites Marche, Hervé Lerat, and Zuzana Macek Jílková.

An Auditable Agent Platform For Automated Molecular Optimisation Marche, Hervé Lerat, and Zuzana Macek Jílková

Reference 75

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:35.105587Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation cf1dae5d-851f-45c6-9134-038abb05ac11 · outbound

This paper cites Manning and Lewis C.

An Auditable Agent Platform For Automated Molecular Optimisation Manning and Lewis C

Reference 76

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:34.882385Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation f683bbb5-3fb4-4b5f-b89f-c7d1f5896c11 · outbound

This paper cites Matheny Jr and Martin L.

An Auditable Agent Platform For Automated Molecular Optimisation Matheny Jr and Martin L

Reference 77

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:34.645610Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 15c28bfd-7101-42ae-8be4-a4060e8617f3 · outbound

This paper cites AKT inhibitors: New weapons in the fight against breast cancer? Frontiers in Pharmacology , 12:662232, 2021.

An Auditable Agent Platform For Automated Molecular Optimisation AKT inhibitors: New weapons in the fight against breast cancer? Frontiers in Pharmacology , 12:662232, 2021

Reference 78

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:34.447458Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 00a4945d-cf68-4b77-85ce-ed69496a6abc · outbound

This paper cites AKT1 transcriptomic landscape in breast cancer cells.

An Auditable Agent Platform For Automated Molecular Optimisation AKT1 transcriptomic landscape in breast cancer cells

Reference 79

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:34.270434Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation c0b4358c-6c3b-4ae2-8fc2-8fcc5b9495c0 · outbound

This paper cites Integrating molecular design resources within modern drug discovery research: The Roche experience.

An Auditable Agent Platform For Automated Molecular Optimisation Integrating molecular design resources within modern drug discovery research: The Roche experience

Reference 80

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:34.098248Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation e57431ae-eca0-44d4-abda-70c897e0e195 · outbound

This paper cites Differential regulation of AKT1 contributes to survival and proliferation in hepatocellular carcinoma cells by mediating NOTCH1 expression.

An Auditable Agent Platform For Automated Molecular Optimisation Differential regulation of AKT1 contributes to survival and proliferation in hepatocellular carcinoma cells by mediating NOTCH1 expression

Reference 81

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:33.792926Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation f445014a-ba4e-451b-aedc-a9f3228ef5e3 · outbound

This paper cites Thomas, Maria Deak, Dario R.

An Auditable Agent Platform For Automated Molecular Optimisation Thomas, Maria Deak, Dario R

Reference 82

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:33.504538Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation f8d97805-793b-4a22-ae5f-2da712595c26 · outbound

This paper cites Turner, Mafalda Oliveira, Sacha J.

An Auditable Agent Platform For Automated Molecular Optimisation Turner, Mafalda Oliveira, Sacha J

Reference 83

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:33.251734Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation db491b62-360f-4655-9492-401615341f77 · outbound

This paper cites Davies, Judit Debreczeni, Hannah Dry, Philippa Dudley, Ryan Greenwood, Paul D.

An Auditable Agent Platform For Automated Molecular Optimisation Davies, Judit Debreczeni, Hannah Dry, Philippa Dudley, Ryan Greenwood, Paul D

Reference 84

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:33.012200Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 15f289db-45f0-4f96-a21b-7a92812a6734 · outbound

This paper cites Wu, Joshua Ballard, Brian B.

An Auditable Agent Platform For Automated Molecular Optimisation Wu, Joshua Ballard, Brian B

Reference 85

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:32.857169Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 972e99e2-a77d-4d0d-a013-04f2956cd457 · outbound

This paper cites Large Language Models Think Too Fast To Explore Effectively.

An Auditable Agent Platform For Automated Molecular Optimisation Large Language Models Think Too Fast To Explore Effectively

Reference 87

Resolution: unresolved; no resolver link, observed 2026-08-06T04:32:30.453762Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation e44c42ce-223f-43ba-8f82-514897551d8e · outbound

This paper cites Evolve: Evaluating and optimizing llms forin-context exploration.

An Auditable Agent Platform For Automated Molecular Optimisation Evolve: Evaluating and optimizing llms forin-context exploration

Reference 88

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:32.693710Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation f59c7531-a6b4-479c-a999-397f8f86ceec · outbound

This paper cites The art and science of molecular docking.

An Auditable Agent Platform For Automated Molecular Optimisation The art and science of molecular docking

Reference 89

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:32.510445Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 64bf49de-3daf-490a-8a0b-4bbfa8afedd1 · outbound

This paper cites Accurate structure prediction of biomolecular interactions with alphafold 3.

An Auditable Agent Platform For Automated Molecular Optimisation Accurate structure prediction of biomolecular interactions with alphafold 3

Reference 90

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:32.400207Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 3bb7e4a0-7fa6-40e6-8fde-27b5e62edfc6 · outbound

This paper cites Boltz-2: Towards accurate and efficient binding affinity prediction.

An Auditable Agent Platform For Automated Molecular Optimisation Boltz-2: Towards accurate and efficient binding affinity prediction

Reference 91

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:32.214811Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation ffdf9759-509e-4207-9467-36594fcfc127 · outbound

This paper cites Claude 3.7 Sonnet and Claude code, February 2025.

An Auditable Agent Platform For Automated Molecular Optimisation Claude 3.7 Sonnet and Claude code, February 2025

Reference 92

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:32.070988Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 5d49faaf-6a25-4ef4-8125-c65b84cc6485 · outbound

This paper cites OpenAI o3 and o4-mini system card, April 2025.

An Auditable Agent Platform For Automated Molecular Optimisation OpenAI o3 and o4-mini system card, April 2025

Reference 93

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:31.915631Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation c0a256de-d4ff-45ac-a807-52abc9faeaf9 · outbound

This paper cites Gemini: A Family of Highly Capable Multimodal Models.

An Auditable Agent Platform For Automated Molecular Optimisation Gemini: A Family of Highly Capable Multimodal Models

Reference 94

Resolution: unresolved; no resolver link, observed 2026-08-06T04:32:30.484043Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 5d491006-ca73-44bc-b622-3a43538a8edb · outbound

This paper cites The virtual lab: Ai agents design new sars-cov-2 nanobodies with experimental validation.

An Auditable Agent Platform For Automated Molecular Optimisation The virtual lab: Ai agents design new sars-cov-2 nanobodies with experimental validation

Reference 95

Resolution: unresolved; no resolver link, observed 2026-08-06T04:32:30.488836Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 75d9dc92-5025-4a05-ab42-acb537bdcf40 · outbound

This paper cites an unresolved cited work.

An Auditable Agent Platform For Automated Molecular Optimisation Unresolved cited work

Reference 96

Resolution: unresolved; raw_fallback, observed 2026-08-06T04:32:31.743593Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 983819ce-4bf3-475e-81be-024ce2b465ef · outbound

This paper cites Quantifying the chemical beauty of drugs.

An Auditable Agent Platform For Automated Molecular Optimisation Quantifying the chemical beauty of drugs

Reference 97

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:31.590155Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 080158ee-c321-46e1-927c-02219fe58b7c · outbound

This paper cites A., Lombardo, F., Dominy, B.

An Auditable Agent Platform For Automated Molecular Optimisation A., Lombardo, F., Dominy, B

Reference 98

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:31.439123Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Observation 29a54785-7999-495e-a21a-58dcd21f14b9 · outbound

This paper cites Estimation of synthetic accessibility score of drug-like molecules based on molecular complexity and fragment contributions.

An Auditable Agent Platform For Automated Molecular Optimisation Estimation of synthetic accessibility score of drug-like molecules based on molecular complexity and fragment contributions

Reference 99

Resolution: unresolved; no resolver link, observed 2026-08-06T04:32:30.506715Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 80106bcb-b244-4dd5-bb0c-6b1388ae1f55 · outbound

This paper cites A., & Crippen, G.

An Auditable Agent Platform For Automated Molecular Optimisation A., & Crippen, G

Reference 100

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T04:32:31.290821Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-16T06:30:59.297886+00:00.

Coverage vector

Reference resolution

Outbound references

Pith citing papers