Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution | Paper Citation Record

Observation 9ecce555-b743-40de-b721-059ba332cd3f · outbound

This paper cites Amount and distribution of 5-methylcytosine in human dna from different types of tissues or cells.Nucleic acids research, 10(8):2709–2721, 1982.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Amount and distribution of 5-methylcytosine in human dna from different types of tissues or cells.Nucleic acids research, 10(8):2709–2721, 1982

Reference 1

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This paper cites The 5-methylcytosine content of dna from human tumors.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution The 5-methylcytosine content of dna from human tumors

Reference 2

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This paper cites Dna methylation-based classification of central nervous system tumors.Nature, 555(7697):469–474, 2018.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Dna methylation-based classification of central nervous system tumors.Nature, 555(7697):469–474, 2018

Reference 3

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This paper cites Ultra-fast deep-learned cns tumor classification during surgery.Nature, 622(7984):842–849, 2023.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Ultra-fast deep-learned cns tumor classification during surgery.Nature, 622(7984):842–849, 2023

Reference 4

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This paper cites crossnn is an explainable framework for cross-platform dna methylation-based classification of tumors.Nature cancer, 6(7):1283– 1294, 2025.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution crossnn is an explainable framework for cross-platform dna methylation-based classification of tumors.Nature cancer, 6(7):1283– 1294, 2025

Reference 5

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This paper cites Systematic assessment of tumor purity and its clinical implications.JCO precision oncology, 4:995–1005, 2020.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Systematic assessment of tumor purity and its clinical implications.JCO precision oncology, 4:995–1005, 2020

Reference 6

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This paper cites Hallmarks of cancer: new dimensions.Cancer discovery, 12(1):31–46, 2022.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Hallmarks of cancer: new dimensions.Cancer discovery, 12(1):31–46, 2022

Reference 7

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This paper cites Hot and cold tumors: Immunological features and the therapeutic strategies.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Hot and cold tumors: Immunological features and the therapeutic strategies

Reference 8

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This paper cites Dna methylation arrays as surrogate measures of cell mixture distribution.BMC bioinformatics, 13:1–16, 2012.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Dna methylation arrays as surrogate measures of cell mixture distribution.BMC bioinformatics, 13:1–16, 2012

Reference 9

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Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Unresolved cited work

Reference 10

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This paper cites Comprehensive cell type decomposition of circulating cell-free dna with celfie.Nature communications, 12(1):2717, 2021.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Comprehensive cell type decomposition of circulating cell-free dna with celfie.Nature communications, 12(1):2717, 2021

Reference 11

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This paper cites Cell type deconvolution of methylated cell-free dna at the resolution of individual reads.NAR Genomics and Bioinformatics, 5(2):lqad048, 2023.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Cell type deconvolution of methylated cell-free dna at the resolution of individual reads.NAR Genomics and Bioinformatics, 5(2):lqad048, 2023

Reference 12

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This paper cites A dna methylation atlas of normal human cell types.Nature, 613(7943):355–364, 2023.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution A dna methylation atlas of normal human cell types.Nature, 613(7943):355–364, 2023

Reference 13

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This paper cites Computational deconvolution of dna methylation data from mixed dna samples.Briefings in Bioinformatics, 25(3):bbae234, 2024.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Computational deconvolution of dna methylation data from mixed dna samples.Briefings in Bioinformatics, 25(3):bbae234, 2024

Reference 14

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This paper cites Cost-effective methylome sequencing of cell-free dna for accurately detecting and locating cancer.Nature communications, 13(1):5566, 2022.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Cost-effective methylome sequencing of cell-free dna for accurately detecting and locating cancer.Nature communications, 13(1):5566, 2022

Reference 15

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This paper cites Dna hypomethylation in cancer cells.Epigenomics, 1(2):239–259, 2009.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Dna hypomethylation in cancer cells.Epigenomics, 1(2):239–259, 2009

Reference 16

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This paper cites Genome-wide classification of tumor-derived reads from bulk long-read sequencing.bioRxiv, pages 2026–03, 2026.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Genome-wide classification of tumor-derived reads from bulk long-read sequencing.bioRxiv, pages 2026–03, 2026

Reference 17

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Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Unresolved cited work

Reference 18

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Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Unresolved cited work

Reference 19

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This paper cites Methylbert enables read-level dna methylation pattern identification and tumor deconvolution using a transformer-based model.Nature Communications, 16(1):788, 2025.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Methylbert enables read-level dna methylation pattern identification and tumor deconvolution using a transformer-based model.Nature Communications, 16(1):788, 2025

Reference 20

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This paper cites Bert: Pre-training of deep bidi- rectional transformers for language understanding.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Bert: Pre-training of deep bidi- rectional transformers for language understanding

Reference 21

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This paper cites Focal loss for dense object detection.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Focal loss for dense object detection

Reference 22

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation 853eab98-9760-4611-b8bf-ab1c2e3b9cd1 · outbound

This paper cites Label distribution learning.IEEE Transactions on Knowledge and Data Engineering, 28(7): 1734–1748, 2016.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Label distribution learning.IEEE Transactions on Knowledge and Data Engineering, 28(7): 1734–1748, 2016

Reference 23

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This paper cites Label enhancement for label distribution learning.IEEE Transactions on Knowledge and Data Engineering, 33(4):1632–1643, 2021.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Label enhancement for label distribution learning.IEEE Transactions on Knowledge and Data Engineering, 33(4):1632–1643, 2021

Reference 24

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This paper cites Classification with label distribution learning.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Classification with label distribution learning

Reference 25

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This paper cites Rethinking the inception architecture for computer vision.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Rethinking the inception architecture for computer vision

Reference 26

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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This paper cites When does label smoothing help?Advances in neural information processing systems, 32, 2019.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution When does label smoothing help?Advances in neural information processing systems, 32, 2019

Reference 27

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Observation 17d1829a-3dd8-44e2-88a6-f1c6b58ed9de · outbound

This paper cites On calibration of modern neural networks.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution On calibration of modern neural networks

Reference 28

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This paper cites Beyond temperature scaling: Obtaining well-calibrated multi-class probabilities with dirichlet calibration.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Beyond temperature scaling: Obtaining well-calibrated multi-class probabilities with dirichlet calibration

Reference 29

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Observation 4b5c2498-63b6-437f-9b29-112b209c5ae4 · outbound

This paper cites Fidelity of the methylation pattern and its variation in the genome.Genome Research, 13(5): 868–874, 2003.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Fidelity of the methylation pattern and its variation in the genome.Genome Research, 13(5): 868–874, 2003

Reference 30

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This paper cites Single-cell multi-omic detection of dna methylation and histone modifications reconstructs the dynamics of epigenomic maintenance.Nature Methods, 22(10):2042–2051, Oct 2025.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Single-cell multi-omic detection of dna methylation and histone modifications reconstructs the dynamics of epigenomic maintenance.Nature Methods, 22(10):2042–2051, Oct 2025

Reference 31

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correction dated 2025-11-14. Source: crossref record 10.1038/s41592-025-02979-7->10.1038/s41592-025-02847-4:correction, observed 2026-07-11T03:05:43.481271+00:00. This notice travels one citation hop only.

correction dated 2026-02-20. Source: crossref record 10.1038/s41592-026-03031-y->10.1038/s41592-025-02847-4:correction, observed 2026-07-11T03:09:06.766653+00:00. This notice travels one citation hop only.

Observation ab1f1feb-efee-46b0-a458-a0b8e4e9a111 · outbound

This paper cites Drautz-Moses, Stephan C.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Drautz-Moses, Stephan C

Reference 32

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Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Unresolved cited work

Reference 33

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Observation cfb451eb-c6b9-4629-afae-b701f781aa04 · outbound

This paper cites Dna-binding factors shape the mouse methylome at distal regulatory regions.Nature, 480(7378):490–495, 2011.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Dna-binding factors shape the mouse methylome at distal regulatory regions.Nature, 480(7378):490–495, 2011

Reference 34

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Observation 228098d4-3b8d-4210-949c-18b956991f65 · outbound

This paper cites Function and information content of dna methylation.Nature, 517(7534):321–326, 2015.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Function and information content of dna methylation.Nature, 517(7534):321–326, 2015

Reference 35

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Observation 3de5eff9-4b02-43de-968f-587a4a8e06e3 · outbound

This paper cites Murphy.Machine learning : a probabilistic perspective.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Murphy.Machine learning : a probabilistic perspective

Reference 36

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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This paper cites A study of the robustness of knn classifiers trained using soft labels.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution A study of the robustness of knn classifiers trained using soft labels

Reference 37

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Observation 2c7d25f0-7892-4a27-996a-c0ede122840d · outbound

This paper cites Transformers: State-of-the-art natural language processing.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Transformers: State-of-the-art natural language processing

Reference 38

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation df8bb3e4-d630-4bab-900b-8617f539fc5f · outbound

This paper cites Xgboost: A scalable tree boosting system.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Xgboost: A scalable tree boosting system

Reference 39

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation 1d5eb0c7-1e0c-4126-b783-3f3093d663cc · outbound

This paper cites Pytorch: An imperative style, high-performance deep learning library.Advances in neural information processing systems, 32, 2019.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Pytorch: An imperative style, high-performance deep learning library.Advances in neural information processing systems, 32, 2019

Reference 40

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation f5eb0e0c-66c9-460c-9ef5-8de6090d2418 · outbound

This paper cites Cvxpy: A python-embedded modeling language for convex optimiza- tion.Journal of Machine Learning Research, 17(83):1–5, 2016.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Cvxpy: A python-embedded modeling language for convex optimiza- tion.Journal of Machine Learning Research, 17(83):1–5, 2016

Reference 41

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation 49450894-1046-4ca1-b0de-fd466cb3fb0e · outbound

This paper cites Efficient projections onto the l1-ball for learning in high dimensions.Proceedings of the 25th International Conference on Machine Learning, pages 272–279, 07 2008.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Efficient projections onto the l1-ball for learning in high dimensions.Proceedings of the 25th International Conference on Machine Learning, pages 272–279, 07 2008

Reference 42

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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This paper cites Megakaryocyte-and erythroblast-specific cell-free dna patterns in plasma and platelets reflect thrombopoiesis and erythropoiesis levels.Nature communications, 14(1):7542, 2023.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Megakaryocyte-and erythroblast-specific cell-free dna patterns in plasma and platelets reflect thrombopoiesis and erythropoiesis levels.Nature communications, 14(1):7542, 2023

Reference 43

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This paper cites Tabula sapiens reveals transcription factor expression, senescence effects, and sex-specific features in cell types from 28 human organs and tissues.bioRxiv, pages 2024–12, 2025.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Tabula sapiens reveals transcription factor expression, senescence effects, and sex-specific features in cell types from 28 human organs and tissues.bioRxiv, pages 2024–12, 2025

Reference 44

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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This paper cites The tabula sapiens: A multiple-organ, single-cell transcriptomic atlas of humans.Science, 376(6594):eabl4896, 2022.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution The tabula sapiens: A multiple-organ, single-cell transcriptomic atlas of humans.Science, 376(6594):eabl4896, 2022

Reference 45

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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This paper cites Better bootstrap confidence intervals.Journal of the American Statistical Association, 82 (397):171–185, 1987.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Better bootstrap confidence intervals.Journal of the American Statistical Association, 82 (397):171–185, 1987

Reference 46

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation f47a4e5f-8727-4753-927b-72aae2788bc5 · outbound

This paper cites Benchmarking of methods for dna methylome deconvolution.Nature Communications, 15(1):4134, 2024.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Benchmarking of methods for dna methylome deconvolution.Nature Communications, 15(1):4134, 2024

Reference 47

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Observation 7a3f7dbb-f030-45c0-b8dc-a5e2a753de7e · outbound

This paper cites Systematic evaluation of methylation-based cell type deconvolution methods for plasma cell-free dna.Genome biology, 25(1):318, 2024.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Systematic evaluation of methylation-based cell type deconvolution methods for plasma cell-free dna.Genome biology, 25(1):318, 2024

Reference 48

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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This paper cites A benchmark of dna methylation deconvolution methods for tumoral fraction estimation using deconflow.bioRxiv, pages 2025–11, 2025.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution A benchmark of dna methylation deconvolution methods for tumoral fraction estimation using deconflow.bioRxiv, pages 2025–11, 2025

Reference 49

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This paper cites Guidelines on optimizing dna methylation reference panels for cell-type deconvolution.Communications Biology, 2026.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Guidelines on optimizing dna methylation reference panels for cell-type deconvolution.Communications Biology, 2026

Reference 50

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation ef0f62d8-ec31-4d4c-af98-35d7f78d99c2 · outbound

This paper cites Systematic evaluation of cell-type deconvolution pipelines for sequencing-based bulk dna methylomes.Briefings in bioinformatics, 23(4):bbac248, 2022.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Systematic evaluation of cell-type deconvolution pipelines for sequencing-based bulk dna methylomes.Briefings in bioinformatics, 23(4):bbac248, 2022

Reference 51

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation 56dae875-c9a2-47c8-b665-310207650673 · outbound

This paper cites wgbstools: a computational suite for dna methylation sequencing data analysis.Life Science Alliance, 9(4), 2026.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution wgbstools: a computational suite for dna methylation sequencing data analysis.Life Science Alliance, 9(4), 2026

Reference 52

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation 3766244a-13a8-4b7a-a130-2c292aa73a1c · outbound

This paper cites removal of ‘confounding’ markers.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution removal of ‘confounding’ markers

Reference 53

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation a3618f83-b980-4648-916e-5ff556d12f5a · outbound

This paper cites an unresolved cited work.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Unresolved cited work

Reference 54

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation 7351bd90-f9e5-4657-8c76-639c2e8a0d13 · outbound

This paper cites an unresolved cited work.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Unresolved cited work

Reference 55

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation a45f1b61-9072-4e07-8c33-768f8e04fbb9 · outbound

This paper cites In our experiments, we use as class prior both the distribution of classes in the training data (which is the mathematically correct choice) and the uniform distribution.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution In our experiments, we use as class prior both the distribution of classes in the training data (which is the mathematically correct choice) and the uniform distribution

Reference 56

Resolution: malformed identifier; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation 88169043-3baf-48c0-bb80-1742d231d7c8 · outbound

This paper cites top-25 unmethylated markers atlases.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution top-25 unmethylated markers atlases

Reference 57

Resolution: malformed identifier; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation fd8773a7-0d52-413c-925e-c207acf154d2 · outbound

This paper cites We selected U25 Best Based on Proxy GSS (right graph) by subsetting the Top-25 regions per cell type from the U250 atlas, ordered by Proxy GSS.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution We selected U25 Best Based on Proxy GSS (right graph) by subsetting the Top-25 regions per cell type from the U250 atlas, ordered by Proxy GSS

Reference 58

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

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Observation 1846f528-9f3a-4bf2-a2cc-31114fbbd74e · outbound

This paper cites an unresolved cited work.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Unresolved cited work

Reference 59

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

Source-reported events for the cited work

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Observation 4082b4d9-52bc-411b-a83a-834d00242131 · outbound

This paper cites an unresolved cited work.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Unresolved cited work

Reference 60

Resolution: unresolved; no resolver link, observed 2026-07-11T10:30:38.991050Z

Source-reported events for the cited work

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Observation 26dc153d-9926-4d9c-9b99-b9830bd3f648 · outbound

This paper cites Tissue Concordance Score.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution Tissue Concordance Score

Reference 61

Resolution: malformed identifier; no resolver link, observed 2026-07-11T10:30:38.991050Z

Source-reported events for the cited work

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Observation b652da3c-c97f-4d75-82dc-f33404dcd215 · outbound

This paper cites ”, “” and “.

Data-Driven Soft Labeling Scales DNA Read Classification to Whole-Body Cell-Type Deconvolution *”, “**” and “***

Reference 62

Resolution: malformed identifier; no resolver link, observed 2026-07-11T10:30:38.991050Z

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