Paper Citation Record · LEDGER

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop

As of 10 August 2026, this Paper Citation Record lists 40 of 40 outbound references and 0 inbound Pith citation observations for arXiv:2507.10502.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2507.10502 v2

Coverage vector

measured 40 of 40 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-06T17:32:21.299222Z

measured 40 of 40 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-10T06:31:04.303077+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

40 of 40 outbound references displayed

verified exact5
verified fuzzy9
unresolved26
parse uncertain0
malformed identifier0
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation ec689ec8-19db-48bd-87d8-499ad80f4f99 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 1

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.910964Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 66e16b71-1252-4b9f-ba75-57ced8d58162 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 3

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.790465Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation ca5bf7fa-213c-43ad-ac07-2507aab53d94 · outbound

This paper cites & Saez-Rodriguez, J.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop & Saez-Rodriguez, J

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:32:21.777534Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation aa34aff4-649c-4b1c-ac2c-1722cb9ffef4 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 5

Resolution: verified exact; doi, observed 2026-08-06T17:32:21.389640Z

Source-reported events for the cited work

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Observation fcdc2748-bbd6-4423-a192-70d1f7390326 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 6

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.765708Z

Source-reported events for the cited work

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Observation a10707b3-38ef-4341-8a7a-0c879594ced4 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 7

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.752820Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 0d687467-007f-41bb-b44b-a5889c5b1fbc · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 8

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.740193Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 0580dd60-f59c-42ea-9f70-8cd864432f1d · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 9

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.727279Z

Source-reported events for the cited work

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Observation 9c7518e7-61ef-4bb3-861a-152e09683667 · outbound

This paper cites CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods

Reference 10

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:32:21.714812Z

Source-reported events for the cited work

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Observation f68b9dd3-3de1-49a4-bb51-edce6aefc7bb · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 11

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.702658Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 9e435914-d473-4b3a-82a4-035f18a8547e · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 12

Resolution: verified exact; doi, observed 2026-08-06T17:32:21.377241Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 0e2f74c4-4f99-4865-8fb4-7128f7c0a264 · outbound

This paper cites & Xing, E.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop & Xing, E

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:32:21.688789Z

Source-reported events for the cited work

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Observation eacc0417-4378-4d8c-8fea-d8efc2436291 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 14

Resolution: verified exact; doi, observed 2026-08-06T17:32:21.365276Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 35c41077-19c3-4d0e-ada5-f16b43631b04 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 15

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.675358Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation b993677b-2992-4ceb-b8d1-3f02c249490e · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 16

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.663277Z

Source-reported events for the cited work

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Observation 70d6c7c8-e8ca-463e-b7eb-42199daad9c8 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 17

Resolution: unresolved; no resolver link, observed 2026-08-06T17:32:21.208839Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation bf286d55-b7c0-49cc-be18-f3b90df79e06 · outbound

This paper cites & Narayanan, A.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop & Narayanan, A

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:32:21.650334Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 69ed6504-1b21-4e3e-9c77-2b7786d59d80 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 19

Resolution: verified exact; doi, observed 2026-08-06T17:32:21.345261Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 11cd1de7-c5ab-4524-93d8-317594cebf70 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 20

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.638901Z

Source-reported events for the cited work

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Observation ac6323d4-855e-409f-aad2-99a1b899d68a · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 21

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.627593Z

Source-reported events for the cited work

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Observation 0445b6a2-0145-4508-8a73-ce016cf55564 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 22

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.614981Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 2890d2b6-746c-4f77-b77b-5347b8ed4806 · outbound

This paper cites & Shi, L.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop & Shi, L

Reference 23

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Observation 9db1cfbb-979a-45c0-b729-49102dc0c1b9 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 24

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.588452Z

Source-reported events for the cited work

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Observation 956c0942-cb22-4adc-878e-8bea73a0d15e · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 25

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Source-reported events for the cited work

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Observation 2a8e0900-a1d4-4900-8336-02963afe6c73 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 26

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Observation f941ea8f-5b9e-4fca-a9ff-19b767c91915 · outbound

This paper cites & Prainsack, B.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop & Prainsack, B

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:32:21.555220Z

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Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 28

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Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 29

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Source-reported events for the cited work

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This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 30

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This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 31

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This paper cites Positive directions from negative results.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Positive directions from negative results

Reference 32

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Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 33

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Observation c9edfca7-d7f9-48f9-873b-c0d453473d9f · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 34

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Source-reported events for the cited work

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Observation 4cf178ff-6e8d-4594-9457-a9cc68a9c745 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 35

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Source-reported events for the cited work

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Observation 99ebd98f-110f-40c7-95c4-e1578a722b80 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 36

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Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 37

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Source-reported events for the cited work

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Observation 0e16959e-a787-4773-9a8a-9fb78e592bd2 · outbound

This paper cites an unresolved cited work.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop Unresolved cited work

Reference 38

Resolution: unresolved; raw_fallback, observed 2026-08-06T17:32:21.437407Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 36f73b4f-eb1b-4fcf-a31c-3d46d7ce9fd8 · outbound

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Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop T., Judson, R

Reference 39

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:32:21.425603Z

Source-reported events for the cited work

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Observation d6700e6a-378d-40b2-bb12-04507207667a · outbound

This paper cites & Moult, J.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop & Moult, J

Reference 40

Resolution: verified fuzzy; raw_fallback, observed 2026-08-06T17:32:21.412896Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Observation 088186f0-268d-4f9b-b382-1bec6074033d · outbound

This paper cites & Moult, J.

Benchmarking and Evaluation of AI Models in Biology: Outcomes and Recommendations from the CZI Virtual Cells Workshop & Moult, J

Reference 41

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Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-10T06:31:04.303077+00:00.

Pith citing papers

No inbound Pith citation observations are available.