Paper Citation Record · LEDGER

Multi-omic Causal Discovery using Genotypes and Gene Expression

As of 8 August 2026, this Paper Citation Record lists 33 of 33 outbound references and 0 inbound Pith citation observations for arXiv:2505.15866.

A citation records a reference. It does not transfer a finding from one paper to another.

pith.paper-citation-record.v1
2505.15866 v1

Coverage vector

measured 33 of 33 reference resolution

Typed states for the displayed outbound observations.

Source: paper_references, paper_reference_links, observed 2026-08-07T15:22:53.518142Z

measured 33 of 33 standing notices

One-hop event checks from named stored sources.

Source: scholarly_work_events, retraction_status_cache, observed 2026-08-08T06:32:00.761636+00:00

measured 0 of 0 inbound itemization

Pith citing papers itemized under the disclosed page cap.

Source: paper_references, paper_reference_links

measured 0 of 1 external citation measurements

A source-named dated measurement, never combined with another source.

Source: cited_works

Reference resolution

33 of 33 outbound references displayed

verified exact3
verified fuzzy19
unresolved10
parse uncertain0
malformed identifier1
metadata mismatch0

External citation measurements

No source-named external measurement is stored.

Outbound references

Observation 66c096a4-7703-4296-9b1c-66b213b27434 · outbound

This paper cites Abu-Elmagd, Mourad Assidi, A.

Multi-omic Causal Discovery using Genotypes and Gene Expression Abu-Elmagd, Mourad Assidi, A

Reference 1

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:50.449999Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation b63d54b9-9d1f-4928-a3a0-3c8a5e2bb78e · outbound

This paper cites Perspective: Sustaining the big-data ecosystem.

Multi-omic Causal Discovery using Genotypes and Gene Expression Perspective: Sustaining the big-data ecosystem

Reference 2

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:57.532477Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 9edf6ce5-f350-472d-b2c4-f550c4e67b80 · outbound

This paper cites The landscape of genetic complexity across 5,700 gene expression traits in yeast.

Multi-omic Causal Discovery using Genotypes and Gene Expression The landscape of genetic complexity across 5,700 gene expression traits in yeast

Reference 3

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:57.332756Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 38fb7825-9374-4106-adec-c335866c3acd · outbound

This paper cites Inferring gene regulatory networks from a population of yeast segregants.

Multi-omic Causal Discovery using Genotypes and Gene Expression Inferring gene regulatory networks from a population of yeast segregants

Reference 4

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:57.120373Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation d38443f8-4248-417d-bef6-5fd87961fa69 · outbound

This paper cites Harnessing naturally randomized transcription to infer regulatory relationships among genes.

Multi-omic Causal Discovery using Genotypes and Gene Expression Harnessing naturally randomized transcription to infer regulatory relationships among genes

Reference 5

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:56.922569Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation d61d7a12-3148-41f1-9cfd-5d5128e620de · outbound

This paper cites Optimal structure identification with greedy search.

Multi-omic Causal Discovery using Genotypes and Gene Expression Optimal structure identification with greedy search

Reference 6

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:50.834578Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 36d06469-a456-4b27-a392-747599019d70 · outbound

This paper cites A Logical Characterization of Constraint-Based Causal Discovery.

Multi-omic Causal Discovery using Genotypes and Gene Expression A Logical Characterization of Constraint-Based Causal Discovery

Reference 7

Resolution: verified exact; local_arxiv, observed 2026-08-07T15:22:54.147410Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 98bc8007-664f-4e78-bf50-dca751aa43aa · outbound

This paper cites Danchin, Gang Fang, and Stanislas Noria.

Multi-omic Causal Discovery using Genotypes and Gene Expression Danchin, Gang Fang, and Stanislas Noria

Reference 8

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:50.994948Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 276a0117-a984-4388-b8da-2e2036d248a6 · outbound

This paper cites Data-driven covariate selection for nonparametric estimation of causal effects.

Multi-omic Causal Discovery using Genotypes and Gene Expression Data-driven covariate selection for nonparametric estimation of causal effects

Reference 9

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:56.732526Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 848c3e43-2194-4791-9273-4ee049fb47b8 · outbound

This paper cites He, Dongliang Ge, and Max M He.

Multi-omic Causal Discovery using Genotypes and Gene Expression He, Dongliang Ge, and Max M He

Reference 10

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:51.186080Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation ac139e92-017f-4c9d-a805-3e0735eb87f6 · outbound

This paper cites Phosphatidylcholine synthesis influences the diacylglycerol homeostasis required for sec14p-dependent golgi function and cell growth.

Multi-omic Causal Discovery using Genotypes and Gene Expression Phosphatidylcholine synthesis influences the diacylglycerol homeostasis required for sec14p-dependent golgi function and cell growth

Reference 11

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:56.564725Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 3c41f3de-3722-466c-9523-143ae2fce0e8 · outbound

This paper cites Application of causal inference to genomic analysis: Advances in methodology.

Multi-omic Causal Discovery using Genotypes and Gene Expression Application of causal inference to genomic analysis: Advances in methodology

Reference 12

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:56.350455Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 07cab59d-81a4-4e3a-a7f6-ebe46c210923 · outbound

This paper cites Modelling and analysis of gene regulatory networks.

Multi-omic Causal Discovery using Genotypes and Gene Expression Modelling and analysis of gene regulatory networks

Reference 13

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:56.178150Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 80895501-a709-4e7d-b557-33b3b732be1d · outbound

This paper cites Moderated estimation of fold change and dispersion for rna-seq data with deseq2.

Multi-omic Causal Discovery using Genotypes and Gene Expression Moderated estimation of fold change and dispersion for rna-seq data with deseq2

Reference 14

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:56.006971Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation e577d932-db2f-4b7b-a597-b31b4b5029e7 · outbound

This paper cites Ancestral causal inference.

Multi-omic Causal Discovery using Genotypes and Gene Expression Ancestral causal inference

Reference 15

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:55.838860Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 2a946b8b-de31-4b8e-be9e-a61501ef27e1 · outbound

This paper cites Pratlong, Laurent Abi-Rached, J.

Multi-omic Causal Discovery using Genotypes and Gene Expression Pratlong, Laurent Abi-Rached, J

Reference 16

Resolution: verified exact; doi, observed 2026-08-07T15:22:53.914164Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 3d38905a-d1d1-420d-a950-8749cda8983b · outbound

This paper cites Bayesian network induction via local neighborhoods.

Multi-omic Causal Discovery using Genotypes and Gene Expression Bayesian network induction via local neighborhoods

Reference 17

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:55.710914Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation e60c1f2b-1721-478b-921f-342cf72765af · outbound

This paper cites Detection and interpretation of expression quantitative trait loci (eqtl).

Multi-omic Causal Discovery using Genotypes and Gene Expression Detection and interpretation of expression quantitative trait loci (eqtl)

Reference 18

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:55.531204Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 0eb1f148-4e2d-4258-a21b-825b69030a93 · outbound

This paper cites From ‘omics to multi-omics technologies: the discovery of novel causal mediators.

Multi-omic Causal Discovery using Genotypes and Gene Expression From ‘omics to multi-omics technologies: the discovery of novel causal mediators

Reference 19

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:55.349453Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation af0aa3ce-b098-4f0e-8696-410ca1f1bfc8 · outbound

This paper cites Neale and N.

Multi-omic Causal Discovery using Genotypes and Gene Expression Neale and N

Reference 20

Resolution: verified exact; doi, observed 2026-08-07T15:22:53.738734Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 3a7d969a-078d-421e-ab50-a3694c8e5d2f · outbound

This paper cites Causality.

Multi-omic Causal Discovery using Genotypes and Gene Expression Causality

Reference 21

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:52.408081Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 4be0e9a9-bf22-49a6-9b4a-e972f2d157fb · outbound

This paper cites Elements of causal inference: foundations and learning algorithms.

Multi-omic Causal Discovery using Genotypes and Gene Expression Elements of causal inference: foundations and learning algorithms

Reference 22

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:52.511580Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 88bd0c3a-8f97-47f3-b11e-35bf05c84d71 · outbound

This paper cites Recent innovations and technical advances in high-throughput parallel single-cell whole-genome sequencing methods.

Multi-omic Causal Discovery using Genotypes and Gene Expression Recent innovations and technical advances in high-throughput parallel single-cell whole-genome sequencing methods

Reference 23

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:55.177276Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation ad4aaf34-64cf-46fb-9fa7-d634c29fb8ed · outbound

This paper cites High-throughput sequencing technologies.

Multi-omic Causal Discovery using Genotypes and Gene Expression High-throughput sequencing technologies

Reference 24

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:54.988463Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 308b6225-aa35-4790-8a73-510fcd4f6aee · outbound

This paper cites Statistical Applications in Genetics and Molecular Biology, 3 0 (1), 2004.

Multi-omic Causal Discovery using Genotypes and Gene Expression Statistical Applications in Genetics and Molecular Biology, 3 0 (1), 2004

Reference 25

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:54.847929Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation ba72c546-2a4f-4a50-93ee-1baaf5c5c38b · outbound

This paper cites Causation, prediction, and search.

Multi-omic Causal Discovery using Genotypes and Gene Expression Causation, prediction, and search

Reference 26

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:52.891754Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 08a63167-124f-4bd8-b086-e9fa49d55ee8 · outbound

This paper cites Algorithms for large scale markov blanket discovery.

Multi-omic Causal Discovery using Genotypes and Gene Expression Algorithms for large scale markov blanket discovery

Reference 27

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:54.714373Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation f2ff8152-7a99-412e-b820-6396071d09f3 · outbound

This paper cites Veenstra.

Multi-omic Causal Discovery using Genotypes and Gene Expression Veenstra

Reference 28

Resolution: malformed identifier; no resolver link, observed 2026-08-07T15:22:53.088067Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 367d8c50-c128-4b17-a895-4fc129723a83 · outbound

This paper cites Causal discovery under a confounder blanket.

Multi-omic Causal Discovery using Genotypes and Gene Expression Causal discovery under a confounder blanket

Reference 29

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:54.570283Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Observation 93b25e9b-f8f4-43ba-ab22-d0bfe65e6970 · outbound

This paper cites write newline.

Multi-omic Causal Discovery using Genotypes and Gene Expression write newline

Reference 30

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:53.279538Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 32cd6d39-e0f8-4d7c-8478-266ae3ae1ac4 · outbound

This paper cites @esa (Ref.

Multi-omic Causal Discovery using Genotypes and Gene Expression @esa (Ref

Reference 31

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:53.362502Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation 54132833-34fb-43ee-9f6c-72d447c59299 · outbound

This paper cites an unresolved cited work.

Multi-omic Causal Discovery using Genotypes and Gene Expression Unresolved cited work

Reference 32

Resolution: unresolved; no resolver link, observed 2026-08-07T15:22:53.449047Z

Source-reported events for the cited work

Unavailable: canonical work link unavailable.

Observation a6148674-dcc2-4ea7-9073-ba64f8dfa6df · outbound

This paper cites 6DTpDQ 2(C.

Multi-omic Causal Discovery using Genotypes and Gene Expression 6DTpDQ 2(C

Reference 33

Resolution: verified fuzzy; raw_fallback, observed 2026-08-07T15:22:54.414154Z

Source-reported events for the cited work

No event found in the named queried sources as of 2026-08-08T06:32:00.761636+00:00.

Pith citing papers

No inbound Pith citation observations are available.