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arxiv: q-bio/0407011 · v3 · pith:T3GCHTKSnew · submitted 2004-07-07 · 🧬 q-bio.SC

Phase Transition in Reconstituted Chromatin

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keywords chromatintransitionreconstitutedmicroscopyphasetermsanalysisatomic
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By observing reconstituted chromatin by fluorescence microscopy (FM) and atomic force microscopy (AFM), we found that the density of nucleosomes exhibits a bimodal profile, i.e., there is a large transition between the dense and dispersed states in reconstituted chromatin. Based on an analysis of the spatial distribution of nucleosome cores, we deduced an effective thermodynamic potential as a function of the nucleosome-nucleosome distance. This enabled us to interpret the folding transition of chromatin in terms of a first-order phase transition. This mechanism for the condensation of chromatin is discussed in terms of its biological significance.

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