Typed states for the displayed outbound observations.
Source: paper_references, paper_reference_links, observed 2026-08-07T14:03:13.766676Z
Paper Citation Record · LEDGER
As of 8 August 2026, this Paper Citation Record lists 100 of 107 outbound references and 0 inbound Pith citation observations for arXiv:2505.20098.
A citation records a reference. It does not transfer a finding from one paper to another.
Typed states for the displayed outbound observations.
Source: paper_references, paper_reference_links, observed 2026-08-07T14:03:13.766676Z
One-hop event checks from named stored sources.
Source: scholarly_work_events, retraction_status_cache, observed 2026-08-08T06:32:00.761636+00:00
Pith citing papers itemized under the disclosed page cap.
Source: paper_references, paper_reference_links
A source-named dated measurement, never combined with another source.
Source: cited_works
100 of 107 outbound references displayed
External citation measurements
No source-named external measurement is stored.
Observation 11f9741d-2bb3-468a-9498-7e053a227839 · outbound
Transformers in Protein: A Survey Attention is all you need,
Reference 1
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Observation 153e6353-24bb-4412-8fd0-96baf27807a9 · outbound
Transformers in Protein: A Survey Bert: Pretraining of deep bidirectional transformers for language understanding,
Reference 2
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Transformers in Protein: A Survey Language Models are Few-Shot Learners
Reference 3
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Transformers in Protein: A Survey Pmanet: Malicious url detection via post-trained language model guided multi-level feature attention network,
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Observation 3d4d026b-2edb-4b24-b5b5-94803bff3829 · outbound
Transformers in Protein: A Survey Vul- lmgnns: Fusing language models and online-distilled graph neural networks for code vulnerability detection,
Reference 5
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Observation 090e8977-48b0-4283-bb5f-3aa03b0c2eac · outbound
Transformers in Protein: A Survey Ethereum fraud detection via joint transaction language model and graph representation learning,
Reference 6
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Observation cbc9fc81-2788-449c-9928-8de7f178a3bc · outbound
Transformers in Protein: A Survey Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences,
Reference 7
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Observation ec6c8986-89f2-46a0-9ea0-38ffaca4f5ae · outbound
Transformers in Protein: A Survey Highly accurate protein structure prediction with alphafold,
Reference 8
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Observation 1f10aad7-8ae2-4257-b491-645d10d96d31 · outbound
Transformers in Protein: A Survey Evaluating protein transfer learning with tape,
Reference 9
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Observation 67c759d0-de49-469b-9b02-38d3efa00956 · outbound
Transformers in Protein: A Survey Evolutionary velocity with protein language models predicts evolutionary dynamics of diverse proteins,
Reference 10
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Observation 541af0e6-d586-43b3-b98f-ad7e4843aedc · outbound
Transformers in Protein: A Survey Language models of protein sequences at the scale of evolution enable accurate structure prediction,
Reference 11
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Observation bd9d9d93-3e98-4a94-9062-b22a947bb7dc · outbound
Transformers in Protein: A Survey Deep learning in bioinformatics,
Reference 12
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Observation cb1a694b-c43c-4ac8-888a-2191a3a807af · outbound
Transformers in Protein: A Survey Machine learning solutions for predicting protein–protein interactions,
Reference 13
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Observation a63d47f9-65a1-47a2-9bd5-5557f04428d6 · outbound
Transformers in Protein: A Survey Unified rational protein engineering with sequence-based deep representation learning,
Reference 14
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Observation fadd9d83-7fd7-4c6c-957b-24875e26299e · outbound
Transformers in Protein: A Survey Protein- bert: a universal deep-learning model of protein sequence and function,
Reference 15
Source-reported events for the cited work
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Observation 5b67f996-2976-4c25-ace5-fe44a74258ff · outbound
Transformers in Protein: A Survey Deep learning in proteomics,
Reference 16
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Observation 03432406-c26b-4d04-94ed-8ec244a6fc0f · outbound
Transformers in Protein: A Survey Transformer- based deep learning for predicting protein properties in the life sci- ences,
Reference 17
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Observation 726c8010-dff6-4829-bad3-529769afefb9 · outbound
Transformers in Protein: A Survey Machine learning: its challenges and opportunities in plant system biology,
Reference 18
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Observation 67a5439a-fc11-471a-9aa3-2fe1e8e56d82 · outbound
Transformers in Protein: A Survey Artificial intelligence in the prediction of protein–ligand interactions: recent advances and future directions,
Reference 19
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Observation abc0a439-80a7-4c82-856e-1dfffd390980 · outbound
Transformers in Protein: A Survey Roberta: A robustly optimized bert pretraining approach,
Reference 20
Source-reported events for the cited work
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Observation 66a8fca6-a8c8-4f2b-96db-8122db9aa916 · outbound
Transformers in Protein: A Survey Linformer: Self- attention with linear complexity,
Reference 21
Source-reported events for the cited work
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Observation b9d15f7a-2b29-4276-a802-79e344bfc57d · outbound
Transformers in Protein: A Survey An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale
Reference 22
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Unavailable: canonical work link unavailable.
Observation d1a97527-1b71-4e8d-853a-965c416ec943 · outbound
Transformers in Protein: A Survey On the turing completeness of modern neural network architectures,
Reference 23
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation edaa7f6f-29ef-46d4-8212-50afbc622043 · outbound
Transformers in Protein: A Survey On the relationship between self-attention and convolutional layers,
Reference 24
Source-reported events for the cited work
Unavailable: canonical work link unavailable.
Observation 149f5466-658c-4ea0-93ff-ac0c19101a84 · outbound
Transformers in Protein: A Survey Deformable convolutional networks,
Reference 25
Source-reported events for the cited work
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Observation d9416745-fb67-4044-b307-5a2050200300 · outbound
Transformers in Protein: A Survey Prottrans: Towards cracking the language of life’s code through self-supervised deep learning and high performance computing,
Reference 26
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Observation ecb48275-bb3d-4bad-8174-e91806388abc · outbound
Transformers in Protein: A Survey PeptideBERT: A Language Model based on Transformers for Peptide Property Prediction
Reference 28
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Observation 8aacccda-8aca-4e94-8b81-f5c2e0c22272 · outbound
Transformers in Protein: A Survey Language models of protein sequences at the scale of evolution enable accurate structure prediction,
Reference 29
Source-reported events for the cited work
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Observation fc94ce6e-da4e-451d-b4a7-9ecd7cb59b64 · outbound
Transformers in Protein: A Survey Msa transformer,
Reference 30
Source-reported events for the cited work
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Observation 61207f5b-eb10-4055-b21f-1b21ddea99ca · outbound
Transformers in Protein: A Survey Endowing Protein Language Models with Structural Knowledge
Reference 31
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Observation 0dabe15b-0983-4d99-a48e-ae8380c727ed · outbound
Transformers in Protein: A Survey Alberts, D
Reference 32
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Observation 7eadb735-6a4a-4d62-9cbc-754d1d93af29 · outbound
Transformers in Protein: A Survey Prediction of protein conformation,
Reference 33
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Transformers in Protein: A Survey Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins,
Reference 35
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Observation 3e1a1c4e-8dee-4938-bc9e-7996b14c1f83 · outbound
Transformers in Protein: A Survey Modeling aspects of the language of life through transfer-learning protein sequences,
Reference 36
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Observation d9ba9688-bb48-466d-ae7b-7779ea88856b · outbound
Transformers in Protein: A Survey Tm-align: a protein structure alignment algorithm based on the tm-score,
Reference 39
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Observation 5ae9f3e3-0e2f-46d4-a036-2cc5756fc791 · outbound
Transformers in Protein: A Survey Prottrans: towards cracking the language of life’s code through self-supervised learning,
Reference 40
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Observation 7d02ba1e-27f6-4760-baf2-d51fb5df205c · outbound
Transformers in Protein: A Survey The protein-folding problem, 50 years on,
Reference 41
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Observation 2ca1d86b-229f-4f4c-8358-0c8b77a96715 · outbound
Transformers in Protein: A Survey Protein folding and misfolding,
Reference 42
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Observation fa4c2328-ded1-4ae0-bb57-e98e9316dc1a · outbound
Transformers in Protein: A Survey Goap: a generalized orientation-dependent, all-atom statistical potential for protein structure prediction,
Reference 48
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Observation d4d6aa8c-7305-4efb-9537-7e651be703f5 · outbound
Transformers in Protein: A Survey Protein secondary structure prediction based on position- specific scoring matrices,
Reference 49
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Observation a66d5f8e-cea0-4994-9b36-7efaa7e99d9e · outbound
Transformers in Protein: A Survey Prediction of protein secondary structure at better than 70% accuracy,
Reference 50
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Observation 20f0a81d-c60e-4240-b9ba-b695ab249108 · outbound
Transformers in Protein: A Survey Protein-folding dynamics: overview of molecular simulation techniques,
Reference 51
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Observation 7dbea9a1-6407-467e-aaad-16c7c698ba78 · outbound
Transformers in Protein: A Survey Protein modeling by e-mail,
Reference 53
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Transformers in Protein: A Survey Language models of protein sequences at the scale of evolution enable accurate structure prediction,
Reference 57
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Observation 3b472261-bf11-4e39-a63d-78e394de49bb · outbound
Transformers in Protein: A Survey Suppression of alpha-band power underlies exogenous attention to emotional distractors,
Reference 58
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Observation 566780d4-7a88-4014-a5a4-4f14e81b5dde · outbound
Transformers in Protein: A Survey Improved protein structure prediction using potentials from deep learning,
Reference 60
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Observation b669394d-c0e7-4567-bc20-2234f7734254 · outbound
Transformers in Protein: A Survey Evaluating protein transfer learning with tape,
Reference 61
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Observation a19f3cdb-fcbf-445e-8a85-76fef5604b8a · outbound
Transformers in Protein: A Survey A Protein Structure Prediction Approach Leveraging Transformer and CNN Integration
Reference 62
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Transformers in Protein: A Survey Protein- bert: a universal deep-learning model of protein sequence and function,
Reference 63
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Transformers in Protein: A Survey Trans-morfs: A disordered protein predictor based on the transformer architecture,
Reference 64
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Transformers in Protein: A Survey ChemBERTa: Large-Scale Self-Supervised Pretraining for Molecular Property Prediction
Reference 65
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Observation 11484f55-03b6-4dab-b0be-7aa5f1194a35 · outbound
Transformers in Protein: A Survey Ramsundar, P
Reference 66
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Observation af2ce176-96ba-4f34-bbe5-850a6f28a3ae · outbound
Transformers in Protein: A Survey High-resolution de novo structure prediction from primary sequence,
Reference 67
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Transformers in Protein: A Survey Protgpt2 is a deep unsupervised language model for protein design,
Reference 68
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Transformers in Protein: A Survey Large language models generate functional protein sequences across diverse families,
Reference 69
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Observation 2b83b2bc-12d4-4801-ab1d-6ebf547bb60d · outbound
Transformers in Protein: A Survey De novo design of protein structure and function with rfdiffusion,
Reference 70
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Observation 9e84ba09-7c22-4b6d-9030-76ad1fee4f31 · outbound
Transformers in Protein: A Survey Mftrans: A multi-feature transformer network for protein secondary structure prediction,
Reference 72
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Transformers in Protein: A Survey Transconv: Convolution-infused transformer for protein secondary structure prediction,
Reference 73
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Observation 58ebcf24-a840-4a10-9328-e230b9efd3d9 · outbound
Transformers in Protein: A Survey De novo atomic protein structure modeling for cryoem density maps using 3d transformer and hmm,
Reference 74
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Transformers in Protein: A Survey A critical review of five machine learning-based algorithms for predicting protein stability changes upon mutation,
Reference 75
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Transformers in Protein: A Survey Gpcrpred: an svm-based method for prediction of families and subfamilies of g-protein coupled receptors,
Reference 76
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Transformers in Protein: A Survey Multi-scale deep learning for the imbalanced multi-label protein subcellular localization prediction based on im- munohistochemistry images,
Reference 77
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Transformers in Protein: A Survey Prog-sol: Predicting protein solubility using protein embeddings and dual-graph convolutional networks,
Reference 78
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Transformers in Protein: A Survey Deep-probind: Bind- ing protein prediction with transformer-based deep learning model,
Reference 79
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Transformers in Protein: A Survey Insights into the inner workings of transformer models for protein function prediction,
Reference 80
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Transformers in Protein: A Survey Segt-go: a graph transformer method based on ppi serialization and explanatory artificial intelligence for protein function prediction,
Reference 81
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Transformers in Protein: A Survey Integrating transformers and automl for protein function prediction,
Reference 82
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Transformers in Protein: A Survey Deepppi: boosting prediction of protein–protein interactions with deep neural networks,
Reference 83
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Transformers in Protein: A Survey Graphtrans: a software system for network conversions for simulation, structural analysis, and graph operations,
Reference 84
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Transformers in Protein: A Survey Gact-ppis: Prediction of protein-protein interaction sites based on graph structure and transformer network,
Reference 85
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Transformers in Protein: A Survey Tranp-b-site: A transformer enhanced method for prediction of binding sites of protein-protein interactions,
Reference 86
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Transformers in Protein: A Survey Tuna: An uncertainty- aware transformer model for sequence-based protein–protein interaction prediction,
Reference 87
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Transformers in Protein: A Survey Predicting protein-protein binding affinity with deep learning: A comparative analysis of cnn and transformer models,
Reference 88
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Observation 07d8e7d2-c562-4a2b-ab64-11ef1557cf97 · outbound
Transformers in Protein: A Survey A review of transformers in drug discovery and beyond,
Reference 89
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Observation ff5502d0-a63a-4327-bea0-0be01e7a034c · outbound
Transformers in Protein: A Survey Mol-bert: An effective molecular representation with bert for molecular property prediction,
Reference 90
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Transformers in Protein: A Survey Molecular generative graph neural networks for drug discovery,
Reference 91
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Transformers in Protein: A Survey Integrating transformer-based language model for drug discovery,
Reference 93
Source-reported events for the cited work
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Transformers in Protein: A Survey Integrating transformers and many-objective optimization for drug design,
Reference 94
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Transformers in Protein: A Survey Transformers and large language models for chemistry and drug discovery,
Reference 95
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Transformers in Protein: A Survey Sspro/accpro 5: almost perfect prediction of protein secondary structure and relative solvent accessibility using profiles, machine learning and structural similarity,
Reference 96
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Transformers in Protein: A Survey Uniprot: the universal protein knowledgebase in 2021,
Reference 97
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Transformers in Protein: A Survey Mmseqs2 enables sensitive protein sequence searching for the analysis of massive data sets,
Reference 98
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Transformers in Protein: A Survey Confold2: improved contact-driven ab initio protein structure modeling,
Reference 99
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Transformers in Protein: A Survey Language models enable zero-shot prediction of the effects of mutations on protein function,
Reference 101
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