Pith Number

pith:JW24JOYS

pith:2025:JW24JOYSN4KKVMWAS63SY2SYPP

not attested not anchored not stored refs pending

Towards Interpretable Protein Structure Prediction with Sparse Autoencoders

David J. Yang, John J. Yang, Nithin Parsan

arxiv:2503.08764 v1 · 2025-03-11 · q-bio.BM · cs.AI · cs.LG

Open paper page JSON Open Graph Bundle Merged state Verified badge What is a Pith Number?

Add to your LaTeX paper

\usepackage{pith}
\pithnumber{JW24JOYSN4KKVMWAS63SY2SYPP}

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Record completeness

1 Bitcoin timestamp

2 Internet Archive

3 Author claim open · sign in to claim

4 Citations open

5 Replications open

✓ Portable graph bundle live · download bundle · merged state

The bundle contains the canonical record plus signed events. A mirror can host it anywhere and recompute the same current state with the deterministic merge algorithm.

Cited by

4 papers in Pith

Interpretable enzyme function prediction via sparse autoencoder features of ESMC across the microbial protein universe

VFUSE: Virulent Feature Understanding with Sparse autoEncoders

Retrieval and competition: how a protein foundation model starts a protein

Receipt and verification

First computed	2026-07-05T10:29:39.988098Z
Builder	pith-number-builder-2026-05-17-v1
Signature	Pith Ed25519 (`pith-v1-2026-05`) · public key
Schema	pith-number/v1.0

Canonical hash

4db5c4bb126f14aab2c097b72c6a587bf94ee2d345091158920c9cdce7805487

Aliases

arxiv: 2503.08764 · arxiv_version: 2503.08764v1 · doi: 10.48550/arxiv.2503.08764 · pith_short_12: JW24JOYSN4KK · pith_short_16: JW24JOYSN4KKVMWA · pith_short_8: JW24JOYS

Agent API

Resolver JSON Graph JSON Events JSON Schema Signing key

Verify this Pith Number yourself

curl -sH 'Accept: application/ld+json' https://pith.science/pith/JW24JOYSN4KKVMWAS63SY2SYPP \
  | jq -c '.canonical_record' \
  | python3 -c "import sys,json,hashlib; b=json.dumps(json.loads(sys.stdin.read()), sort_keys=True, separators=(',',':'), ensure_ascii=False).encode(); print(hashlib.sha256(b).hexdigest())"
# expect: 4db5c4bb126f14aab2c097b72c6a587bf94ee2d345091158920c9cdce7805487

Canonical record JSON

{
  "metadata": {
    "abstract_canon_sha256": "1e181656210ae0fd5fadbe736fd32ee356814941aece24945acaa61384c73767",
    "cross_cats_sorted": [
      "cs.AI",
      "cs.LG"
    ],
    "license": "http://creativecommons.org/licenses/by/4.0/",
    "primary_cat": "q-bio.BM",
    "submitted_at": "2025-03-11T17:57:29Z",
    "title_canon_sha256": "1d71d90763655e4d8c237bc8e91bdd095b0d7804b92d271660c4f0f1e9401edf"
  },
  "schema_version": "1.0",
  "source": {
    "id": "2503.08764",
    "kind": "arxiv",
    "version": 1
  }
}