Pith Number

pith:MDZAUC5B

pith:2025:MDZAUC5B5HYTOELDMV3IKZ6VG6

not attested not anchored not stored refs pending

PDFBench: A Benchmark for De novo Protein Design from Function

Changzhi Sun, Jiahao Kuang, Jie Wang, Nuowei Liu, Tao Ji, Yuanbin Wu

arxiv:2505.20346 v3 · 2025-05-25 · cs.LG · cs.AI · q-bio.BM

Open paper page JSON Open Graph Bundle Merged state Verified badge What is a Pith Number?

Add to your LaTeX paper

\usepackage{pith}
\pithnumber{MDZAUC5B5HYTOELDMV3IKZ6VG6}

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Record completeness

1 Bitcoin timestamp

2 Internet Archive

3 Author claim open · sign in to claim

4 Citations open

5 Replications open

✓ Portable graph bundle live · download bundle · merged state

The bundle contains the canonical record plus signed events. A mirror can host it anywhere and recompute the same current state with the deterministic merge algorithm.

Cited by

4 papers in Pith

AMix-2: Establishing Protein as a Native Modality in Large Language Models

VibeProteinBench: An Evaluation Benchmark for Language-interfaced Vibe Protein Design

ProteinOPD: Towards Effective and Efficient Preference Alignment for Protein Design

Receipt and verification

First computed	2026-07-07T02:17:07.792629Z
Builder	pith-number-builder-2026-05-17-v1
Signature	Pith Ed25519 (`pith-v1-2026-05`) · public key
Schema	pith-number/v1.0

Canonical hash

60f20a0ba1e9f137116365768567d537bf3dd199bed11978aced70acb9bfa9cd

Aliases

arxiv: 2505.20346 · arxiv_version: 2505.20346v3 · doi: 10.48550/arxiv.2505.20346 · pith_short_12: MDZAUC5B5HYT · pith_short_16: MDZAUC5B5HYTOELD · pith_short_8: MDZAUC5B

Agent API

Resolver JSON Graph JSON Events JSON Schema Signing key

Verify this Pith Number yourself

curl -sH 'Accept: application/ld+json' https://pith.science/pith/MDZAUC5B5HYTOELDMV3IKZ6VG6 \
  | jq -c '.canonical_record' \
  | python3 -c "import sys,json,hashlib; b=json.dumps(json.loads(sys.stdin.read()), sort_keys=True, separators=(',',':'), ensure_ascii=False).encode(); print(hashlib.sha256(b).hexdigest())"
# expect: 60f20a0ba1e9f137116365768567d537bf3dd199bed11978aced70acb9bfa9cd

Canonical record JSON

{
  "metadata": {
    "abstract_canon_sha256": "642e5d7b5d478b3dc289bf5c1bd903563d9bfe02efd89fb628e41d8697319097",
    "cross_cats_sorted": [
      "cs.AI",
      "q-bio.BM"
    ],
    "license": "http://creativecommons.org/licenses/by-nc-nd/4.0/",
    "primary_cat": "cs.LG",
    "submitted_at": "2025-05-25T05:40:15Z",
    "title_canon_sha256": "59d610e4b0a4019f252bb016be38290b710b075f632c3ea1eddeb992bc9d948d"
  },
  "schema_version": "1.0",
  "source": {
    "id": "2505.20346",
    "kind": "arxiv",
    "version": 3
  }
}