Pith Number

pith:WAB5YCZK

pith:2025:WAB5YCZKCMWR4ES36V3BJCSJUA

not attested not anchored not stored refs pending

From Prediction to Simulation: AlphaFold 3 as a Differentiable Framework for Structural Biology

Alireza Abbaszadeh, Armita Shahlaee

arxiv:2508.18446 v1 · 2025-08-25 · q-bio.BM · cs.LG

Open paper page JSON Open Graph Bundle Merged state Verified badge What is a Pith Number?

Add to your LaTeX paper

\usepackage{pith}
\pithnumber{WAB5YCZKCMWR4ES36V3BJCSJUA}

Prints a linked badge after your title and injects PDF metadata. Compiles on arXiv. Learn more · Embed verified badge

Record completeness

1 Bitcoin timestamp

2 Internet Archive

3 Author claim open · sign in to claim

4 Citations open

5 Replications open

✓ Portable graph bundle live · download bundle · merged state

The bundle contains the canonical record plus signed events. A mirror can host it anywhere and recompute the same current state with the deterministic merge algorithm.

Cited by

1 paper in Pith

From Prediction to Simulation: AlphaFold 3 as a Differentiable Framework for Structural Biology

Receipt and verification

First computed	2026-07-05T11:59:24.658070Z
Builder	pith-number-builder-2026-05-17-v1
Signature	Pith Ed25519 (`pith-v1-2026-05`) · public key
Schema	pith-number/v1.0

Canonical hash

b003dc0b2a132d1e125bf576148a49a03f65ae51d415bb4a292e0d00123faebe

Aliases

arxiv: 2508.18446 · arxiv_version: 2508.18446v1 · doi: 10.48550/arxiv.2508.18446 · pith_short_12: WAB5YCZKCMWR · pith_short_16: WAB5YCZKCMWR4ES3 · pith_short_8: WAB5YCZK

Agent API

Resolver JSON Graph JSON Events JSON Schema Signing key

Verify this Pith Number yourself

curl -sH 'Accept: application/ld+json' https://pith.science/pith/WAB5YCZKCMWR4ES36V3BJCSJUA \
  | jq -c '.canonical_record' \
  | python3 -c "import sys,json,hashlib; b=json.dumps(json.loads(sys.stdin.read()), sort_keys=True, separators=(',',':'), ensure_ascii=False).encode(); print(hashlib.sha256(b).hexdigest())"
# expect: b003dc0b2a132d1e125bf576148a49a03f65ae51d415bb4a292e0d00123faebe

Canonical record JSON

{
  "metadata": {
    "abstract_canon_sha256": "e94d12cc11584b6d57ff6032ae0a800565e4cc01b18474180e41492a2b1239fc",
    "cross_cats_sorted": [
      "cs.LG"
    ],
    "license": "http://arxiv.org/licenses/nonexclusive-distrib/1.0/",
    "primary_cat": "q-bio.BM",
    "submitted_at": "2025-08-25T19:49:28Z",
    "title_canon_sha256": "9d7b9127b22f7b541ec8e513ea33de9ab766bcdd0db65bf55250f5c76209b449"
  },
  "schema_version": "1.0",
  "source": {
    "id": "2508.18446",
    "kind": "arxiv",
    "version": 1
  }
}