Only 12.2% of 3,967 eligible prediction model studies share code, with shared repositories frequently lacking dependency specifications and modular structure needed for reproducibility.
Computational reproducibility of Jupyter notebooks from biomedical publications
2 Pith papers cite this work. Polarity classification is still indexing.
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Network analysis of software mentions in biomedical papers identifies high-centrality foundational packages in three major open-source ecosystems.
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Code Sharing In Prediction Model Research: A Scoping Review
Only 12.2% of 3,967 eligible prediction model studies share code, with shared repositories frequently lacking dependency specifications and modular structure needed for reproducibility.
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Biomedical Open Source Software: Crucial Packages and Hidden Heroes
Network analysis of software mentions in biomedical papers identifies high-centrality foundational packages in three major open-source ecosystems.