Both Qβ and SARS-CoV-2 populations display hierarchical genotype networks with a highly abundant central haplotype and diminishing variant abundance at greater Hamming distances.
De Vries, C
6 Pith papers cite this work. Polarity classification is still indexing.
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Review of the fin-to-limb transition proposing a systems biology approach using theory, modeling, and experiments to provide a mechanical explanation for differences between fins and limbs and resolve the homology debate.
Emergence bias is defined as the molecular tendency of sequences to be predisposed toward or against gaining new functions upon mutation, synthesized from prior studies on promoters, enhancers, and de novo proteins.
Models initial-state energy loss, nuclear shadowing, and final-state absorption on J/ψ and ψ(2S) production in p+A collisions, compares to SPS/Fermilab/HERA-B data, and extrapolates absorption levels for NA60+ and CBM.
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Shared quasispecies architecture in experimental and natural RNA virus populations
Both Qβ and SARS-CoV-2 populations display hierarchical genotype networks with a highly abundant central haplotype and diminishing variant abundance at greater Hamming distances.
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Emergence biases in molecular evolution
Emergence bias is defined as the molecular tendency of sequences to be predisposed toward or against gaining new functions upon mutation, synthesized from prior studies on promoters, enhancers, and de novo proteins.