CellxPert uses inference-time MCMC steering on a multi-omics single-cell foundation model to predict genome-wide transcriptomic responses to gene perturbations and outperforms baselines on cell-type annotation, perturbation prediction, and multi-omic integration benchmarks.
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Chem2Gen-Bench is a new benchmark and evaluation framework for measuring alignment between chemical and genetic perturbation responses in matched cell-target contexts using retrieval, similarity, and embedding comparisons.
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CellxPert: Inference-Time MCMC Steering of a Multi-Omics Single-Cell Foundation Model for In-Silico Perturbation
CellxPert uses inference-time MCMC steering on a multi-omics single-cell foundation model to predict genome-wide transcriptomic responses to gene perturbations and outperforms baselines on cell-type annotation, perturbation prediction, and multi-omic integration benchmarks.
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Chem2Gen-Bench: Benchmarking Chemical-to-Genetic Translation in Perturbation Response Space
Chem2Gen-Bench is a new benchmark and evaluation framework for measuring alignment between chemical and genetic perturbation responses in matched cell-target contexts using retrieval, similarity, and embedding comparisons.