Develops an NNGP spatio-temporal model with SMC squared inference for haplotype frequency estimation from pooled genetic data, demonstrated on 3- and 6-marker antimalarial resistance datasets in Africa.
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REX-SUB combines a randomized exchange algorithm with Vecchia approximation to choose subsamples that minimize mean squared prediction error and interval scores in large-scale spatial GPs.
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REX-SUB: A Scalable Subsampling Strategy for Modeling Large Spatial Datasets
REX-SUB combines a randomized exchange algorithm with Vecchia approximation to choose subsamples that minimize mean squared prediction error and interval scores in large-scale spatial GPs.