Discharge letters alone let BERT and Aug-Linear models classify HFrEF vs HFpEF with external-validation AUCs of 0.84 and 0.81, and Aug-Linear explanations matched clinicians better than SHAP/LIME.
Explainable Health Risk Predictor with Transformer-based Medicare Claim Encoder
1 Pith paper cite this work. Polarity classification is still indexing.
abstract
In 2019, The Centers for Medicare and Medicaid Services (CMS) launched an Artificial Intelligence (AI) Health Outcomes Challenge seeking solutions to predict risk in value-based care for incorporation into CMS Innovation Center payment and service delivery models. Recently, modern language models have played key roles in a number of health related tasks. This paper presents, to the best of our knowledge, the first application of these models to patient readmission prediction. To facilitate this, we create a dataset of 1.2 million medical history samples derived from the Limited Dataset (LDS) issued by CMS. Moreover, we propose a comprehensive modeling solution centered on a deep learning framework for this data. To demonstrate the framework, we train an attention-based Transformer to learn Medicare semantics in support of performing downstream prediction tasks thereby achieving 0.91 AUC and 0.91 recall on readmission classification. We also introduce a novel data pre-processing pipeline and discuss pertinent deployment considerations surrounding model explainability and bias.
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Interpretable phenotyping of Heart Failure patients with Dutch discharge letters
Discharge letters alone let BERT and Aug-Linear models classify HFrEF vs HFpEF with external-validation AUCs of 0.84 and 0.81, and Aug-Linear explanations matched clinicians better than SHAP/LIME.