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arxiv: 1510.08797 · v3 · pith:CY4YTCDCnew · submitted 2015-10-29 · 🧮 math.MG · cs.CG· math.CO· q-bio.PE

Convexity in Tree Spaces

classification 🧮 math.MG cs.CGmath.COq-bio.PE
keywords convexitytropicalgeodesicsmetricspacespacesalgorithmarbitrarily
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We study the geometry of metrics and convexity structures on the space of phylogenetic trees, which is here realized as the tropical linear space of all \ ultrametrics. The ${\rm CAT}(0)$-metric of Billera-Holmes-Vogtman arises from the theory of orthant spaces. While its geodesics can be computed by the Owen-Provan algorithm, geodesic triangles are complicated. We show that the dimension of such a triangle can be arbitrarily high. Tropical convexity and the tropical metric behave better. They exhibit properties desirable for geometric statistics, such as geodesics of small depth.

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