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arxiv: 1608.08271 · v1 · submitted 2016-08-29 · ⚛️ physics.bio-ph · math.DG· math.MG

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On the geometry of regular icosahedral capsids containing disymmetrons

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classification ⚛️ physics.bio-ph math.DGmath.MG
keywords icosahedraldisymmetronsfoldcapsidsclassificationpentasymmetronsregularsymmetrons
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Icosahedral virus capsids are composed of symmetrons, organized arrangements of capsomers. There are three types of symmetrons: disymmetrons, trisymmetrons, and pentasymmetrons, which have different shapes and are centered on the icosahedral 2-fold, 3-fold and 5-fold axes of symmetry, respectively. In 2010 [Sinkovits & Baker] gave a classification of all possible ways of building an icosahedral structure solely from trisymmetrons and pentasymmetrons, which requires the triangulation number T to be odd. In the present paper we incorporate disymmetrons to obtain a geometric classification of icosahedral viruses formed by regular penta-, tri-, and disymmetrons. For every class of solutions, we further provide formulas for symmetron sizes and parity restrictions on h, k, and T numbers. We also present several methods in which invariants may be used to classify a given configuration.

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