pith. sign in

arxiv: cond-mat/0108439 · v1 · submitted 2001-08-27 · ❄️ cond-mat.soft · q-bio.BM

Unfolding Rates for the Diffusion-Collision Model

classification ❄️ cond-mat.soft q-bio.BM
keywords unfoldingdiffusion-collisionmodelrateratessecondarystructuralaccepted
0
0 comments X
read the original abstract

In the diffusion-collision model, the unfolding rates are given by the likelihood of secondary structural cluster dissociation. In this work, we introduce an unfolding rate calculation for proteins whose secondary structural elements are $\alpha$-helices, modeled from thermal escape over a barrier which arises from the free energy in buried hydrophobic residues. Our results are in good agreement with currently accepted values for the attempt rate.

This paper has not been read by Pith yet.

discussion (0)

Sign in with ORCID, Apple, or X to comment. Anyone can read and Pith papers without signing in.