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arxiv: cond-mat/0409623 · v1 · submitted 2004-09-23 · ❄️ cond-mat.soft

Periodically driven stochastic un- and refolding transitions of biopolymers

classification ❄️ cond-mat.soft
keywords dataprofilestochasticacquisitionadvantagesanalysisbasicbiomolecules
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Mechanical single molecule experiments probe the energy profile of biomolecules. We show that in the case of a profile with two minima (like folded/unfolded) periodic driving leads to a stochastic resonance-like phenomenon. We demonstrate that the analysis of such data can be used to extract four basic parameters of such a transition and discuss the statistical requirements of the data acquisition. As advantages of the proposed scheme, a polymeric linker is explicitly included and thermal fluctuations within each well need not to be resolved.

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