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arxiv: q-bio/0405001 · v2 · pith:BCUZVU2Cnew · submitted 2004-05-01 · 🧬 q-bio.QM · math.ST· stat.TH

Resultants in Genetic Linkage Analysis

classification 🧬 q-bio.QM math.STstat.TH
keywords analysisgeneticinvariantslinkagemodelsalgebraiccharacteristicscomputations
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Statistical models for genetic linkage analysis of k-locus diseases are k-dimensional subvarieties of a (3^k-1)-dimensional probability simplex. We determine the algebraic invariants of these models with general characteristics for k=1, in particular we recover, and generalize, the Hardy-Weinberg curve. For k = 2, the invariants are presented as determinants of 32x32-matrices of linear forms in 9 unknowns, a suitable format for computations with numerical data.

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